XLOC_011278 (gene) - C. hemisphaerica

Overview
NameXLOC_011278
Unique NameXLOC_011278
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000348:88467..93925-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011278 ID=XLOC_011278|Name=XLOC_011278|organism=Clytia hemisphaerica|type=gene|length=5459bp|location=Sequence derived from alignment at sc0000348:88467..93925- (Clytia hemisphaerica)
CCGGTTTATATCTGATTTGACTTTCGATCTCAGATTTGCCGGCACCGAAA GTTTTCAAAATAAACTTTGTGGTGTTTTGCTCTTTTGCTGGTGATCGTTT CGCATCTTCCACTTTCTGCCACTGATGTGTTATACCTAAAGGCTTCATTT GACATTTGAGCAATCATATGGCGAAGTTGGAAAGTCTTTAATCAAACAGA AGATAGTTTTACACCAATAATAAAGATCAAGATGTCGCCATCGTTAAAGG AAATCGACTCGTAAGGAAAATTTTGTATCGATATTGAAACTTTTTGTTTG TGTCCAATATTTTGTTTGTTCCTATTTTGAAAATTGTCATTAAATATTGT TGATATTTTGGATAATGGGGCTGTAAAAGGGTCAGGGGATGTGTGCAGCC TACCTTTCTACCTTTAATGCCTCCTTTTTTGTTTATCAACAATCACGAGA CTATCTGACACAATCTGACAAAACATGGGACGACAATTCGACCACCATTT CACCGAACCTCCAAAGTCATTTGATTTGAGTTAATAAACAAGTCTGGTTG ATAAACTTGGTGGAGTTATGAAAAAAAAATTGTTGTCAAAGAGATTTAAC AGTACGTAAGTGAAAATACAGGCCAGATATCAACAGTCCCATGTTTCGAC CAATCGTCCCAAGTTAGAGCAGTTGACGGTACCATGGAGATCGGGTAACT TGCATCAGTGAAGGGAGACTTGCATAACCATCAAATGCCTGACCAATCAA AGAAAGCAGCAAAATTTCAAAACAATGTAACTCTCTACCATTTTAGAATC TTATACTTGCCGCACAAGTATTTTTGTGCGAGTTATACTCGGCAACAGAA TTGGGGATAAATAAAATAGCGTGGTTGGAAAATAAAAAATCATGCAAGAT CATAAATTTTAAGATGTTTCTGGATGGCTGCTGGACGTGTAATATGAGAT CTCAAATTAATAATTCTAGTAGGCATAATTATGCATGACATCACTTTTTT TATCGTAAGTTGGTCTAATCTTGACATTCATCTTCTAATTTCCACATCCT TCCTTAGAGATATAGAGGAATTCCTTAGAGGAATCACTGATAGAAGAAAG ATTTTTTCCTCTCTGAACGTACGTTAAACTAAGACAATTTGTTTCAATAA GCAATTCTGACTTTCCTATCATTCCAATCTCCGAAGAAGGGTGTCAAAAT TAGAAGAGGGATGTTGACATTAGACCAACTTACGGTATGATTAGGAGATA ATATATTTATACATTTTTTATTTAGATTTGCATTTTAATGTCCAGTCAGG TCATTCATTTGAGGGCTATGTATGTTAGCCTCCACTGATGCTCCAAACTC AGACTTGACACGAAAAACGTCAAATGGACGTTTTATGTACGAACCCCCAC CCCCTTTCAATTAACGTCACTGTGGCAGTAAAACTTAATCTCAAGATATT AAACCCTTTATCAGCTTCATTGCTATAAATATTCCATGGCTGTTTCCTTT GCGATCTTTATTTTTGCTTGCTTTAGGCAAATCCTCCACTCCTTTGAAAT GCAAGAGCACACAATTTTCCTTTGAAAATACAGAAGACGCAGAATTTTCC TTTAAAAATACGGAAGACACAGATTTTCCTTTGAAAATACGAAAGACAGA CTTTTCCTTTTGAAATAAGGAAGACAGAATTTTCCCTTGTAAATGCAGAA AGACAAAATTTTCCTTTGATGGCAGGAAGACAGAATTTTCCTTTGAAAAT ACAGGATGCAAAATTTTCCTTTGAAATGCAGGAAGACGCAGAATTTTCCT TCAAAAATACGGAAGACACAGAATTTTCCTTTGAAAATACGAAAGACTTT TTCTTTGAAAATACGGAAGACAGAATTTTCCTTTGAAAATACAGGATGCA GAATCTTTTTTTTTTTTTGAATACAAAAGACAGAGTTTTCCTTTAAAAAC ATGAAAGACAGACTTTTCCTTTTGAAATAAGGAAGAAAGAATTTTCCCTT GTAAATGCAGAAAGACAGAATTTTCCTTTGATGGCAGGAAGACAGAATTT TCCTTTGAAAATACAGGATGCAAAATTTCCTTTGAAATGCAGCAAGACGC AGAAATTTCCTTCAAAAATACGGAAGACACAGAATTTTCCTTTGAAAATA CAGAAGACAGAAATTTCCTTTGAAAGATGCAGAATTATTATTTTTTTGAA TACAGAAGACAGAGTTTTCCTTTGAAAATACGGAAAATAGACTTTTCCTT TTGAAATAAGGAAGACAGAATTTTCCTTTGTAAATGCAGGAAGACAGAAT TTTCCTTTGAAAATACAGGATACAAAATTTTCTTTTGAAATAGAGAAGAT AGAATTTTTCTTTAGAAATATAGAAAAGACAGAGTTTTCCTTTGAAATGC AGGAAGACCGAATTTTCCTTTGAAAATAGGAAATACAGAATTTTCCTCCT TAAAATATGGAACACAGAATTTCCGTTTGAGAATGAAAACTAATTATTTT CCTTTTTAAATATGATAGTAAAAAGCAAAGAATATGTCAGAAGAAAGGTG TAAAACAAAAAAAAATAATCGCTATGATTTGACTTTTTTGTGTTTTTGTG TCCTAAAATTACTTTCCCTATCATGTTCTTTGCATTATTTTGCTTCACTA ACATCGAAACGCTTCTTACACTGCACACTTCTTACACTGCACACTTTATG ATACTACAATGAGCTTCCATTGAAAGTAATATTTAACAACTCAGGCTGTA TTTTAGAAAAGTAGGGCAGTGTCTGTTGATGGTCGAAAAGGGCACTTTTT TAGTATTTTTCAACTGAAAAGGCTGTTTTTGCCAACATTTTAGTTATTTC AGAAGGGGGTCGTGTCAGTAATCAGACGCTAAAAAGGCATGAAAAATTGC CTGCGACTTTGATAACTGTCCATAGTTCTAGTCGTCTTTGCCCCTTGCTT CAAGGGGGGCTAGAAGGTTCAAAGGCAACTGGTACCTGGAATAGCCTTAT GCCAGGGGCTACCTACTCGGCTAGGGGTCTCCTACATTTATTCAAATTAA AAAATTTATCAAAGATCAAAAGTTAAACGTCTAATATAGTAACTCTCAAT GTCATAATACGAATGTTACTAACTTACCCAATGCCCCCTGGATTGGTATA TATCTCAGAAAATGTCTTCATATATGAATATTTTTTTGGCATACCTTTTA TCTAAAGACTAAAGTGGGTAGCCAATTATATAAATTTTTCATAAGTAGAA AGACAAAATGATATTCCATCAGATTCATTCCTGGCAATTCGTGACAAAGA AAGTTATTGAAAGTTTCTGTAATGAGGAGCGCCTTGTAAAGTTTTCCTAT TAAATTGGCATATAAATAGTAATATATAACTCAAATTAAGTTAATAGGCA CCTTTTATATGTAAATATGAGTTTTTTAAAGTGTAGCAAAATAATGACAA AAATTTTAATCTGTGCTTATGTTTTTCAAAGTTAGAAAAGACATGAAAAT TAAAAAAAACTGACCCCCTGTCCCTCATTTTTAAGATAACTTTTTCGTTT AAATGATTTCAAAAATAAAATTTCAAGCTGTTTTTATCACTTGCAATTGT TATTAAAAACTTCTCTTCTTTCACAATTTAGACCAGTGCAGATGAGGCTG TATGGTCTTACCAAACACAAGTTTGTTATGGTTTTTACTAGTTTCTGTAT TTCATTCTTTGTTGTGCTTCTCATTGGGATACTTGGTCCTGAGGCTATCG GAGAATCATCAATAACTGCAAAAGAGCTTGGAGTATCTCCTAAACACTTT CTGGTGAGTTATTTTTTCACAAAGATAAAATTAAATTTAAGAAGCTTCTT GTTAATAAGAATTTAATAAAGAGCGCTACTTTGAGTTGACTTACTAAGTG AAACTGTTTTCTGTACTATTTTTAGACTGGTCCTTTCACAATAAATTCTG GATTGGTCAATAAATTCAACCAAGAGCTGTGGTTATTCTGTAAATTCAAA TTGAGGAAGCTTCAAGTGAAAGAAGGTTCGCAAATTTACTTATTCAATTA GAAATATTGATGACAATTAGAGCATTTGTTTCTTTTATAAGATCTTTGCA TAGGGCATTAAAATTATGGTCTTAAAAGAGCTGCAATAAATCGACCCCGC TCCTTCTTGTTATTCCACCCATTTTTGATGATCCCTCTTTCTGTGATTTT CTTGGAGGATGGGCACCATCGCCCTTAACAAAGGGGTTACAAACTTTGTA TTGTCTTGAAAATATTTATATTTGTGTATTGATCTAGATTATAAATTGGA AAGGGAGTTCAGAATGACAACCCAAGTTCTGGGAACCAAAAAAGACTCCA GTCATCAATTAATTAACCATGTGAATCATAATCGAACAAGAACTCTGAAA TGTGATGCCAGTGTAAGCCAATTTGTTTGTTCAATGTTTTGTATGCACAG AATATTTCTTTCTTCCTGGATTTAGTAAATCAAGTGTTTCATGTTGCATG ATATATTTTTCCCAAGCCTCTTATAATCATTAACATCTAAATCATAACCT TCCGTATTAGTATTAGCTCCAGAATAGCTTTATTTTGCCATATTAAAGGT TCTTATTGTGTTTTGTCTGAAAATTTATTATTTTTTAGAATTGTGAATCG TTGGTGGTGTTTCATCTGGGGATGCTTTTGAACCCTTCTTATTTGGTTAC TGTTCGGTTTTTCAATCTGAATCTACCTGATGGCGTAAAAGTTGACAATA TCATTTTCACGGTTTGTTTTTTCTCATCTTACCCATAATCCTTTTCCCGA ATTTGTAGACTGTCAACCTAAATTTTATTGCTCTCTTTTTTTGTCATTAC ACTGAAGTTTCAAGATTTCATTTTTTTTATATTTTAGTTTAAATACTATG AGGAGCAATTCACACAAATTCAAATTTGGTTTCGTTTTGTTTTTTTGGTT CTTGCTTTTACGGTTACGGTAAGTAAATCACTTCAAGCTAAAGAGCACTT CAAACTTTTTGTTTCATTGCTGCTAAATAAAAATTCAGGATGGACCTATC AATTAGCATTTTTAGAATTTTGACAAATAGATTTTGGAACATAAAATTCA TGTCTCCATCTGTTAGTAGATAAAAAAATGTCTTATTAAGGGAAGATTAT AGCGATAATATGTCCTATATATCTTTGTCTTTGTTTCTCTATGTCGAACA ATATTTATTATTTCATTTTTCAGTGTTTGTTCACACACAGTTTACGACAG TATCCAGTCAGAGATTGGTGTATTGAACAAAAGTGGATGTCCATCTTACT ACCCCTTCTTCTTCTCTATGACAGTATAATGCTTTTGTTTGTACATCTTC AGTCAGGGCATTTCCCTTTTCTGACCAATGTTGAGCTCCATATCTGTGTC AATTTAATGTGAAAAAGTTTGTAAATTAAAATTGATGAGTAAGCAAAAGA TATCAACTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020062TCONS_00020062Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020062-proteinTCONS_00020062-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000348supercontigsc0000348:88467..93925 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
59.21 60.43 25.88 22.53 35.07 27.8 40.58 46.4 48.78 39.87 45.13 50 28.83 23.37 20.44 29.31 19.25 22.32 16.05 19.47 24.14 20.69 24 27.24 20.89 20.79 22.13 17.36 14.94 16.31