TCONS_00020062-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020062-protein
Unique NameTCONS_00020062-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length272

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020062-protein ID=TCONS_00020062-protein|Name=TCONS_00020062-protein|organism=Clytia hemisphaerica|type=polypeptide|length=272bp
MSPSLKEIDSPVQMRLYGLTKHKFVMVFTSFCISFFVVLLIGILGPEAIG
ESSITAKELGVSPKHFLTGPFTINSGLVNKFNQELWLFCKFKLRKLQVKE
DYKLEREFRMTTQVLGTKKDSSHQLINHVNHNRTRTLKCDASNCESLVVF
HLGMLLNPSYLVTVRFFNLNLPDGVKVDNIIFTFKYYEEQFTQIQIWFRF
VFLVLAFTVTCLFTHSLRQYPVRDWCIEQKWMSILLPLLLLYDSIMLLFV
HLQSGHFPFLTNVELHICVNLM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011278XLOC_011278Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020062TCONS_00020062Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF06664MIG-14_Wnt-bdcoord: 143..260
e-value: 2.6E-28
score: 99.0

Blast
[Close]
BLAST of TCONS_00020062-protein vs. Swiss-Prot (Human)
Match: TM181 (Transmembrane protein 181 OS=Homo sapiens GN=TMEM181 PE=1 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 6.779e-43
Identity = 105/231 (45.45%), Postives = 141/231 (61.04%), Query Frame = 0 
Query:   14 MRLYGLTKHKFVMVFTSFCISFFVVLLIGILGPEAIGESSITAKELGVSPKHFLTGPFTINSGLVNKFNQELWLFCKFKLRKLQVKEDYKLEREFRMTTQVLGTKKDSSHQLINHVNHNRTRTLKCDASNCESLVVFHLGMLLNPSYLVTVRFFNLNLPDGVKVDNIIFTFKYYEEQFTQIQIWFRFVFLVLAFTVTCLFTHSLRQYPVRDWCIEQKWMSILLPLLLLYDS 244
            MRLY L+K  FV+VF  F I F + + +GI GP+ I ++S     L  S K     P  I S  ++ +NQ+LWL C  +L   Q KE   ++  F MT +V G  +D +   I++  HNRTRTL C A  C  ++V HLG L    Y V V F +L LP    +  + FT+K Y   F++++IWFRF F+VL F VTCLF HSLR++ +RDW IEQKWMS+LLPLLLLY+ 
Sbjct:  144 MRLYTLSKRHFVLVFVVFFICFGLTIFVGIRGPKVI-QTSAANFSLNNSKK---LKPIQILSNPLSTYNQQLWLTCVVELD--QSKET-SIKTSFPMTVKVDGVAQDGTTMYIHNKVHNRTRTLTC-AGKCAEIIVAHLGYLNYTQYTVIVGFEHLKLP----IKGMNFTWKTYNPAFSRLEIWFRFFFVVLTFIVTCLFAHSLRKFSMRDWGIEQKWMSVLLPLLLLYND 362
The following BLAST results are available for this feature:
BLAST of TCONS_00020062-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TM1816.779e-4345.45Transmembrane protein 181 OS=Homo sapiens GN=TMEM1... [more]
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