XLOC_011129 (gene) - C. hemisphaerica

Overview
NameXLOC_011129
Unique NameXLOC_011129
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000336:322735..327123+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011129 ID=XLOC_011129|Name=XLOC_011129|organism=Clytia hemisphaerica|type=gene|length=4389bp|location=Sequence derived from alignment at sc0000336:322735..327123+ (Clytia hemisphaerica)
GTAGACAACAACAAGTATACTTTCGATGATATCTTGGCTGACGATAATGG AGTGTACACATACGAGGGCTCTCCAACTAATCACGTGTATTTTGAAAACG GATACTGTTACACTGCTCacaaaaacgaaaatgaaaatggtTACTTTATC AAAAGAAGAACTGGAAAACGATATGTCGATGAGTTTGTCAATAGAGATAA CGTGTATGTTTTATATCGAACTTACCGTAGACACACATTTTACAAAGGAT TCACAAATGTTGTTTGTAGAATCAAAAATGTCGATGGTGTTTCACTACGC TACTGTTTGGTCATTTATGAGTGGGAATCAGGAGAAGAAGAAAGCAATTT TACTGTGCCCTGTCATGGCAACGCAAAAACTGAAATAATGAAAGAAACTC CTTTTCTCAGAACTGAAAAAAGGATAATCAATACCATGaaagacaacttg aaaaatggaGAAAGACCACAGGATATTTACATCAATAATATTGAATCGTC AGGAGGCCCTATGAATGGTACATCAGTATCTTCTTTCCCAAGGAACATGA AACAGGtataatcaaaataaagattaaaaaatattatttacatATACTAC CATAGGACTGTTGGAAAATGAAATGGAAAATTACTGTTATTACAATATAA AAATTTCGGTCACAAACAAAGCTTTATTTTATCTTGAGTCAGGGAAAACT AGCCTTTGTCAGCGAGTATGATTTTAGGCAGAAGTTGGGAAATTTATTCT GAGGGACTGTTGGGAACCCTTATTTTAAGGTTCCTTATATGTTGACATAC AAAAAAATGCTGACCTTGCAAaatttgctgttttttttaagTATTCAAGC ATGCGCATTTGGCTGAATCAGGAAtttcaccactttcgttttctctaaat caaaacaaaaacttgaacTTACCGAAAAGCACGTGCCTTGTCAGCTAGTA CAATGGCACAACACACTTAAATTGCGGCAAGGAACCTTTAAGGATTGATT ATCAATGTTTAGAAGTGatgcaaatttattttcaatactgGCAGAGCTGA TTAAATAAATAGTCTTCATTTTGTGATTATACACGAAGGAGATTATTAGA TCAATGGATGCTCATTAtcataaaactgaaaattgcCTTTTTATTCATAT ACCTTACATGGGTTTTTCGATTCGTGACGTTACACAATGTTCATAAAAAC CCACCTCAGGTTTAAAAATTAGCTTAATCagagcatttttagtccaaaaa tTGCTAATTACTAGGACTCCACCTTAAGGCCCTTTAAATTAGGAAAACAC AGTCCACTTTTAACCCTTTTTACGCCCAAAGACCAAAAATTATGCCAATA AAATTGCCAACATAAAAATGATTCACAAggtaatattttccttttcagat CTACAACCTTGCCCAGAAGAATAAATTTGAGACGATCGATATAAGAGATA CCGAAGTAGATGATGTCACCATAGATGAAATGCTTCAGATAGTGAAGCAC ATGAAGATGAACCCGGAATCCCTAATAAAAAACGTCGTCTTGACTCCAAA CGAATATTTTATTACTGCATTTGATGACCAACAAATCAATGATATCAACA TGTTTTGCACTACAAAGACGCGCCCCTTGGTGATGGACACAACATTTGAC GTTTGTGACCTATGGCTGACAGATACAGCTTATCAAAACCTGCGATTGGT CAACTCGAAGGGCGATCACCCTTGGTTTTATGGGCCTTGTCTCCTGCATA TGCAAAAGACAACTGAAACATTTGCTCGTTTTGCACTTGACATGGTTGTG TCTGGGTTGAAAAATACCCTAGGTTTTCTAGGTAAGTACTTTTTATCAAA TGCTAACTACTATTCCCTTAATTGCAAAATAGCTCATTTTTTTATATCAT ACAGTTTTATTcatgtatttttttcattcgaATGGATTTCATTCGATTTA ATGAGCTTCGAATTATGCGAGCTTTCCTTTGTTTGGTCAGATTTTGTTAC AGTACAGTCTTGAGACCACTTTATTGCATGACAATTTCGCGGTCATTTTA ATTTCGctgtttttttgccgaaaattgcatttcgctGTCCAAGAGAAAAA GTGTATGTTGCGGCATTTTNtgtttccaattttttttcggacactttggt gtgattttcggacaaatatgacggtctcaggcaaaaatcatagggttaaa aattaatgaaaattctagctagagaaaacggagacctgttgtatattttt ggaaagctctcaaaaatataagattagagatatattgcaagtataggtga tttatgtacctaactcgagatattaacccttgaaaaccgttttttcagcc agaaacagctattttgtccagtctttgcgctttttgaagctcaatatctc tagttaggtactgaaatcacctatacttttaatatatctctaatcctaat ttttttagagctttccaaaattatacaacaggtctccgttttctcgagct aaaattttcattgatttttaaccctatgattttttcctgagaccgtcata tttgtcaaattggaaacatagtaatttcgattcccctaccccttagcttt ccaaaaatgtataacaagtgcttctaacaaaacagtcgagcgattttaca aaatttggttgatttGCAAAATAGTTAATTCTTTTATATCATACAGTTTT ATTcatgtatttttttcattcgaATGGATTTCATTCGATTTAATGAGCTT CGAATTATGCGAGTTTTCCTTTGTTTGGCCAGATTTTGTTACAGTACAGT CTTGAGACTACTTTATTGCATGAAAATTTTGCGGTCATTTTAATTTCGct gtttttttgccgaaaattgcatttcgctGTCCAagagaaaaagtgtattt tgcgacattttaatttcgcggttccgAAGCTTTGAAAGATGAATTACGCT TTTTTACGCCAAAAAGACCGAAAAAAGACATGATTTTTATGTATATTGGA TACGAagtcgaaaaaactttttgtgcaTTTTAATGTCGCGGTTGATCATG CCATAAAATCGTTTTTCGACCCAACCTTCCCTTTGTAATTGCTGGACCCA AATACTTGGTATATAATTTCAGCCCcatctttttgagtttttttttttgg tttaacccactccccccccccccccNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNccccccccccccccccctccaaaaaaaaaattagagagCTGAC GCTATGATTATGGCGATTGCGACGTTTCTGGCCTATTTTCTTTTAGGTAC TGATATGGAAAAGGCCATGTACGAAGGCTTTAAAATCGCTTTTCCGGAAC TAAACAGTCTGCTATGTGTGAAGCATATTCGTGATGCCGAtaaaagaaaa ttatcaaagATCGGAGGAACTGGTCACCAGAGGATTTTGCGTGACATCTA TGGCTCGAATGATGGTATCACTAAAGAGCTTGGGTTGGCTTCTTCGCTAG ACAAAGACGATTTTCAAGCCAAACTTTCTTCGCTAAAGGAAATCTGGGAC TCGCTCACAGATGGATTTCACAATTGGTTCTCACGTAACAGAGCTTCGAA GTTTATTGAATGCGTCATAGAATCTGCTAGAGAATCGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019793TCONS_00019793Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00019793-proteinTCONS_00019793-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000336supercontigsc0000336:322735..327123 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.78 1.77 1.07 0.32 17.87 14.88 10.98 12.86 6.32 9.27 8.04 7.73 8 10.18 7.51 9.63 10.72 8.82 11.76 11.43 7.9 8.75 5.22 6.69 6.76 7.4 13.11 11.73 6.05 6.05