XLOC_011107 (gene) - C. hemisphaerica

Overview
NameXLOC_011107
Unique NameXLOC_011107
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000335:272786..276264-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011107 ID=XLOC_011107|Name=XLOC_011107|organism=Clytia hemisphaerica|type=gene|length=3479bp|location=Sequence derived from alignment at sc0000335:272786..276264- (Clytia hemisphaerica)
AAATCAAATACTAAGGATAAAGCTTGGAGCTTGGAGCTGAAGGCTTGTGA
GTATTTGTAAAACGGCCGCGGAATAATCTCATAGATTAGCACTTGTCGTC
TTACTTTTATTATGGAGGGTTGTTTCAATTATAATCATTTAAATTTGAAC
GGGATTTTCCTTCTGTTTGACGGCGCTTTGTGAGGATGGCTTTTTTATAG
TGATACCTAGAGGGATGCCTAGCCAAATTTGCGAAAACGAAAACACGTCC
ATAATAATTTATGCTTTAGAGTATTTTTTGATTTAGCTTCGAGCTAAATT
CTAAACGCTGAACTTGAGTTGGATCGCGATTGAATGTGCTTGTTGGAAAG
AGAATATTCTTAAGTCTGTCTCAAAAGTTTGTGGATACTTTACTTTGTTG
ACCTTTTTTCAGCCCCCATTCATGCTATGTTAGAAAGTTATACACCGTTG
GAAAGATATTTCGAAGGAGAATAATTCAACCAATTTCAACCAGAGCAGAG
ACTAATGAACCTCAATTAAAAGTTATCAGTGTTTAAGATTCAATTGACAG
CTCATTTAAAATGACTTCCTTAAAAAATGATTTGAACACCCCCTTCTCCC
AGACCCGGTAGGACCTTTTCAGCCAGGGGAATAAAAATAACGGATCGAAA
CACGATGGGGATTGCTATTCCCATGTTTTTATGGCTGGGGATTTCAATCC
CATTGTTTTAAGTAAAAAAATTCAGTGGGGATGAGAAAATTAGTAAATAT
TTTGCAGTGGAGCATTGGTTTATTTAATTTTTTTCAGTGGGGACAAAAAT
TGAAGGAAGATTTTCCACCGGGGACGATATTTTGGCCAATTTTTCCAGTG
GATCTGTGAGAAATGGGTGTATCTGAACACGAGGTCTGCTAAACAATTCT
ATCGTGCTGTAGAAAATGCCCCTACCCCAATTTCATAATGTTCTGAAATT
ATATTGAATCTAGTGAGGTAAGAAAAAAGTTAATTCTAAATAAAATAGAC
ATCTATACACCCAGCTGGCAAACAACGTTGTTTCAACGTTTATCTAACGT
TCACAAGGTCCATTTAACGTAAGATCAATGTTGTAACAATTTTGTATGCC
AGCTCTAAATCCACAGTGAGCGAACGGTCACGTAACCAGAGGATTTCATA
CTCTTTCGTATAAAAGGATCAACAGATCTACGTATAGGATCTCCTCTACT
GTCACGAAGTGTTGACTATTCTATTTCTGCCAAAACAAACATTAACAAAT
TTATGATGAATATTAAGTGATGCTAATGTCCTTTTGAACAAGAGAGCAAG
AATGAGATCATATTCCAATGACGCTGAGTTTGAATTTCCCAAACACATTG
TTTTTAATGTTGACAATCTCAACAAATTTATCGAGAAGCATCATTTCACG
TCGCTTGGATTTGATCAAAAAGTACTTCTTTTTGTATTGTTTGTAGATTC
TCATGTTTTTGTTTTGAAATGAAATTGATCAAGGCGGGGAGTCTATTTTT
CATAACCTAGTTGAACATTTATCACGACTGTGGGAGACCTGCAGTGGTAT
CATTTCATCTTTTAAAGTTTTAAACTCACTGTCTTAACATTCATAAATTT
CATCACTTCATAGAGATCGAGAAAGTCTACAGGAGATTTGACCATGTCGT
CTACAGAGTCTTTAGCAATGGAAGAAACTGAGAAATCGAACAGTTTGCAA
CCCATCGAACGTTTGAATGTGGATGGCTTTTTACGGATGGTTGGAGGCTT
TGGAAAGTTTCAAATCATCTTGGATATAGTATGCTGTATTATAATGTGTC
CTTTTACTTTTCATGTACTTATTATGTACTTTGCTGCTTTGCAACCAGAG
TGGAAATGTGTTGAAAATAGTACAGTATGTTTACTAAATGGAACTTTTAC
GAGTGAAAATGACTTTCGTTGTCAAATTCCACGATCAGAATGGGAATACA
TGAAACCGAGGGAATATTCAATTGTGACGGAATTCGATATTTATTGTGAT
CGTGATTGGATGATTTACATGACAACCTCGATTCTGTTTATTGGTTGGAT
GTTTGGTGCAATCTTCATTGGTTGGTTGTCCGATAATTACGGACGCCGAA
AAACGATGCTCCTTTCAATTGTAATGGTGTTAACAGCTAGTCTAATCGCA
CCTTTTGTCAACAACATTTATGTGTTTATTATCTTTCGTTTCATTGTTGG
TTTCTTCATCCCTGGAGGAGGTGTAATCATGTTTGTTTTAATCTCTGAGA
TTGTCAGCGATAAGTATCGACCACTTGCTGGTATTATTTTGTGGGTCTTC
TTCACCTTAGTTTTATGTATTATGGGACTGTTAGCATACCTCATACCTAA
ATGGAAAATATTATTCATCATCTGTACAGCACCTTTTTTCACCACTTTAC
CGCTCTTTAAATTCATCCCTGAGTCTGTCCGCTGGTTGAGACTAAAAGGA
AAGATCGAAGAAGCTTTGGAAATATTTCAACGAATTGCAGATTGGAATGG
ACGAAAATTGAACCCTAATGCTTCCTTATCGATGGTTCAAGGAGTAGAAC
ACTCTCNAATTGAACCCTAACGCTTCCTTATCGATGGTTCAGGGAGTGGA
ACACTCTTCAAACCCTTTGGATTTATTTAAAACAAAACGTATGGCTATCA
AAACATTGATTCAGGGATTTGCTTGGATGGTTAACGGTATGGTTTACTAT
GGAATCTCATTAGCTTCGGATGACCTTGGTGGATCCTTGTATCTCAACTA
TGTTTTGGTCAGCTTGATAGAGCTACCTGCCCATGTTTTTGCTATTGATT
TTTCCAACAGATTTGGACGCCGTAAAACTACATCGATTTCAATGATTTTA
GCTGGTATATTAACTCTTGCTGTTGCATTTATTCCTAAATCACATAATGA
GTTTAGAGTGATGTTTGGTATGCTTGGAAAGATGCTTATTACTGTCAGTT
TCGATGTCATCTATACTTGGTCTGTGGAAATCTATCCTACCAATATACGA
TCAGAAGCAATGGGATTCTTACAAATTACAAGTCGTATAGGAGCAGCAAG
TGCACCTTGGATAGCCAAAGCAGTAAAGGTCATTCATAACACATTACCTT
TTTTAATTATGGGGGTCTTAGGTCTGTTAGCTGGTGTAGCTTGTTCCATT
TTACCGGAAACGAAAGGACAGGAGACACAAGAGACAGAAAATGACGTCAC
TGAGGAAGTATTTTTCATGGACGAATTTAAGTAGATAATAATTCTGCGAG
TAATCTGAATGCTGTAAATGATTACTAGAGGTGTGTGAAGAGGTGCAAAG
TTTAAATCTTCCAACAATATTGTTCCATATAAGACGCTGTCTCGTTAGCT
TACGGAAAGGGGAAATAGAATGAATTCAAGGATTCTTTCTCATGTAGAAC
CTCTTTACTGACAGCCCCGGTGGAACCTTATTCTTCAGTGGGGATAAAAG
TTCCTATTGAAATCCCAAAAGGGATAGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019760TCONS_00019760Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00019760-proteinTCONS_00019760-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000335supercontigsc0000335:272786..276264 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.34	0.51	0.37	0.18	0.08	0.09	0.14	0.14	0.11	0.22	0.13	0.23	4.63	3.88	4.71	6.32	2.79	2.09	2.28	2.37	7.42	6.58	1.59	1.92	2.83	2.68	0.94	1.13	23.09	30.05