XLOC_011102 (gene) - C. hemisphaerica

Overview
NameXLOC_011102
Unique NameXLOC_011102
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000335:265626..271782+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011102 ID=XLOC_011102|Name=XLOC_011102|organism=Clytia hemisphaerica|type=gene|length=6157bp|location=Sequence derived from alignment at sc0000335:265626..271782+ (Clytia hemisphaerica)
ATCAGAGGTAAAGAAGTCGCACTATCCTTGGGATTAAAGAGATTTCGAGT ATGAAGGTATAAAAAGGCGATGGCATGTATGGATTATTCAGAAGTTGTAG TTGGCATCTTGCCTAGACAACACCAGAGACTCAATCACAATGACGAGCAT GAAGACTTCAACAGTAGTTCTTGCTATTCTGTCAGGTATGTAACAGTTTT TCTTTGTCACACCCCTGTATCAAATAAAAGAGGTAAATGACAATAGCGCG ATGAAAAACGCCTTTTTAATGGGTGGGAATTTCAAACTTCATATTTCCAG CTCGGAAATCAAGTAGAGCGATACTCAAAATTACAGCATATGTCGCAATG GGAAAGAGTAGTTTTCCAATGAGTGAAATTCTGTAGTATTAGTCTGAGGG ATTTTGGGTTTTTTTTGACTGGACCCAAAATTTGCATCCACatggaattt tttgattgaaatgagtTCATTAGGTCCCTAGGAGTGAAAAACCGTTGAGT GCCACTTTTCTCACCTTGGGCATTTCGCATAATGGTGGGAATGGTCCCAT TATGACTTTTCCAATGGGTAATCGAGGGTTCAAATCGGGAAAAATAGAAA GGAAGTACTCTCCGGGTTGTTTGAGTTTAAAATTTACGAGATAATTATTT ATTTTGGTTGATGTGTGCCATCATACGCAAAACAAAGAATCTCATCCAAG ACACACTTAttttaacttaattttttcatttttatgtagTGATCTTTGCT GTTCAAGGAGACCTTCCAACATCATCAACAGGCCCTTCATGTAAGTAAAT TACCCCACACGttatcttttataagaacatccaaaacttttgaagccttc ggatgttcttaactttttgagtatttttgtcaattttcctaagaaatcgg gtgttttagagtccagaAAGCCTTAGaattttcttaatttgttcttaata ttttgaccatcgaagtcttatgttcttatatagtttgctctgataaaaaa catgtataacgctaaaatgtaaaattttacatattttttgtaATGAGAAT GTTTACCTATCCATGCTCATATTCATATTCCAGGTCCAAGCACATTTTGC CAAGGAAAATCAAATGGTGCATTATTCAGGCTGAGTGAGAATTTCCCAAA TTATTACGTCCAATGCAGTCACGGTAAACCCTATTGTCGGCCATGTCCAC CGAAAACAGTTTTTGATAATGTTGTAAGAGTTTGTGTATGGGCATCTCCC ACAAATAACAATGGTCTTTACAACCCATTCCATCATGGCAAAAAACCTCA ACAAGCTTCAACAACGACCACCAAAAGACCACATCatccaacaacaaaac aaacgaCAACCACAACGACAACAACGACACCGACAACCACAACCACAACG ACGACACCGACGACAACGACTAGCACAACACCAAGTACAACAACAATTCA AACAACGACGACAACGAAAGCTCACGACCCCTATCACAAGATCAAACCGC ACCATCCTGCAACAACGAAGAAACCGTACGACCCTTATCATAATATGAAG CCACAACATCCGATAACAACAAAAAAGCCTCACGATCCTTACCACATGGT TAAACCTCATNATTTTTAATGGGTGGGAATTTCAAACTTTATTATTTCCA GCTCGGAAATCAATTAGAGCGATACTCAAAATTACAGCATATGTCGCAAT GGGAAAGAGTAGTTTTCCAATGAGTGAAACTCTATAGTAATAGTCTGAGG GATTTTGGGTTTTTTTTGACTGGACCCAAAATTTGCGTCcacatgaaatt ttttgattgaaatgagtTCATTAGCTCCCTAGGAGGGAAAAACCGTTGAG TGCCACTTTTCTCACCTTGGGCATTTCCCATAATGGTGGGAATGGTCCCA TAATGACTTTTCCAATGAGTAATCGAGGGTTCAAATCGGGAAAAATAGAA AGGAAGTACTCTCCGGGTTGTTTGAGTCTAAAATTTACGAGATAATTATT TATTTTGGTTGATGTGTGCCATCATACGCAAAACAAAGAATCTCATCCAA GACACACTTAttctaaattaattttttcatttttatgtagTGATCTTTGC TGTTCAAGGAGACCTTCCAACATCATCAACAGGCCCTTCGTGTAAGTAAA TTACCCCACACGCTAtctttaataagaacatccaacatttttggagcctt cggatgttcttaactttttgagttttaagcctggaaatgttcttaatatg ttcttattttcaccattttttgagtatttttgtcaattttcctaagaaat cgggtgttttagagtccggaaagccttagaatgttcttaacttgttctta atattttgaccatcgaagtcttatgttcttatatagtttgctcttataaa aaacgtgtataacgctaaaatgtaaaattttacatattttttgtaATGAG AATGTTTACCTATTCATGCTCATATTCATGTTACAGGTCCAAGCACATTA TGCCAAGGAAAATCAAATGGTGCACTATTCAGGCTGAGTGAGAATTTCCC AAATTATTACGTCCAATGCAGTCACGGTAAACCCTATTGTCGACCATGTC CACCGAAAACAGTTTTTGATAATGCTGTAAGAGTTTGTGTATGGGCATCT GCCACAAATAACAATGGTATTTACAACCCATTTCATCATGGCAAAAAACC TCAACAGGCTTCAACAACAACCACCAAAAGACCACATCatccaacaacaa aacaaacgaCAACCACAACGACAACGACGACACCGACACCGACAACCACA ACGACAACGACGACACCGACAACCACAACGACAACGACGACACCGACGAC AACGACTAGCACTACACCAAGTACAACAACAACTCAAACAACGAAAGCTC ACGACCCCTATCATAAGATCAAACCGCACCATCCTGTAACAACGAAGAAA CCGTACGACCCTTATCATAATATGAAGCCACAACATCCAGCAACAACAAA AAATCCTCACGATCCTTACCACATGGTTAAACCTCATCATCCTAAACCAC ACCACCCTCACGATCAGTACAACCCATATATGATGAAAACTACGACGACT TCAACTACCCCGACAAAAACTACAACGACGACAAAAGTTACAACGACAAC TAAGAGACCACACAACCCTTACCATGGAATACATCATCCAAACCCATTCA ACATCTACCACCCTGTGTACGTTGGTATTCATCCTAACAACCCTTACCAC CCTTTCCACCCGTTCCCAACAAAGAAACCGTATCCAACTGCACCTACAAC TCGTTATACCAACCCTACGACCAAATCAACGACTACACACTATACTCATC CAACAACAACCTCTACAATTACAACTCATCCCACTAAACCAACAACTCAT CCAACAGCTCACCCAACAACTCATCCTACAACTCACCCAACAACTCATCC TACAACTCACCCAACAACTCATCCTACAACAACAAAATCAACCACGACAA CTCACTACACTCATCCTACAACTCATCCTACAACAACAAAATCAACCACG ACAACTCACTACACTCATCCAACAACTCACCCAACAACTCATCCTACAAC TCATCCTACAACAACAAAATCAACCACGACAACTCACTACACTCATCCAA CAACTCACCCAACAACTCATCCAACAACTCATCCTACAACAACAAAATCA ACCACGAcaactcactacactcacccaaCGACTCATCCAACGACTCATCC AACAACTCATCCTACAACAACAAAATCAACCACGACAACACATTATACTC CAATCACAACAAAGTCGACAACGAcaactcactacactcacccaaCGACT CATCCAACAACTCACCCAACGACTAAATCAACAACTCACTATACTCATCC AACTCAGCCATCGACGACAACCCACTACACTCATCCAACCCAACCATCGA CAACAACCCACTTTACTCACCCAACAACTAAGTCAACGACCCATTACACC AACCCAACGACTACAACACATTATACCCATCCGACCCAACCTTCAACCAC CACTNCAACCCAACGACTACAACCCATTATACCCATCCGACCCAACCTTC AACAACCACTCACTACACACATCCAACAACTAAGAGACCATACCAACCAA ATCCACACCAGCCTACCTTTGATCCTTTCTTCCACTACTTGATCACATCA ACAACGAAGAAGCCAGACATCCACGACCCATTCGCACATCTGAGAATCCC ATATCATCCACATCCTACAACCAAGTCTACAACAACCCGACCAACACACC CACCAACTACAACCCACTATACCCACCCAACAACTAAATCAACCACCCAT CCAACGACAAAAAGTACAACTCACTATACCCATCCAACCACCACAACCCA CCAGACAACCAAGTCAACAACTGACTACACACAGCCAACTCAACCATCGA CAACAACTCATTACACTAACCCTACAACAACGAAGAAGCCATCCATCCAC GACCCATTTGCACATTTAAGAATCCCATATCACCCACACCCAACTACAAA GTCAACGACTCATTACACCAGACCAACACACCCACCAACAACAACCCAAT ATACCCACCCAACAACTAAATCAACCACCCATCCAACGACAAAGAGTACA ACTCACTATACCCATCCAACCACCACGACCCACCCGACAACCAAGTCTAC AACCCATCACACAAACCCTACAACAACGAAGAAGCCATATTTCCATGACC CATTTGCACATCTGAGAATCCCATTCCAACCACACCCAACAACCAAGTCG ACGACACATTACACTCGTCCTACAATCAAGAGTACAACACACTACACTCA TCCAACCAATCCAACAACAACCACTCATTCCACACACCCAACGACAAAGC CAACGACAACTCACTACACTCATCCTACTACTACGACTCCCTATACAAAC CCAACAACCACAACCCATTCTACCCAACCAACAACTAAATCAACAACTCA CTATACTCATCCAACTCAGCCATCGACAACAACCCACTACACTCATCCAA CAACTAAAAGTACAACCCACCCAACGACAAAGAGTACGACACACTATACA CATCCAACGCAACCATCGACAACAACGCAATATACTAACCCAACCACCAC ACGACATTATAAACAACCAGTGGCTCCAACAATCATCCCTTGTAAGTTTT TAAAGACCTTAAGGATTATTAGCTTAAAAACTCTGTTgtaaaaagtttca attttcaaaaatttaaaatgtatcGGACCTCAAGAGTTTGGTaacagaaa aagaagaagaaataagaatcttcattgtatattaGCCTTAACGAAGGAAC AGTATTTTTAATCAATATCTTAACCCTATAAGTACCATGGTCAtttgttt ctaaatttttataaaggaaatcgctagttcaaactttaaaggcttatatc tccggatctagaatgAGTTAGAAGCTGCGCGGACCTATCTGAATGATAAA AAGGTGCCCagtagtaaaacttcaaattaattcgctaGATGACAGAACCA AGTAAACAGGGccaattttggatgttcttaaatcccttgttgacaaaata tggtaaaaaaacggtcaaaatcttagaaaagtggatttttgtcaaatttt cgcCCTCCTATATGGGCCCGTGTCTAGTATACTCGTCATTGATACTTAAA GGGTCAAtgttaaacctttattattttttttcgatttcaggTCCAAAATC GTTGTGTTATGGATACAGTGGTAACACGTGGATATTCTTCATCTATCCTG GTCAACCACAATGGTATGTACAGTGTGTCCGAGGAACATCACATTGTCGT AAGTGTCGGGAAGGTACACTATTCAATCCAATAGTCAACACTTGTACATC ACAACATGTTCCTTTTAATCATCCTCCTCAGAATCATCATCCTCACGATA CAAGAGTACCTGGATGTCATGGACCAAATTGTGACTATGTTTAAAATcct aataaaataatttttttagaaaaataagaatctatcttttatctattttt ttttagttaTTTTAAAGCATATCCCTTATATGATATTTTTAGcgtatttt aaacattttttaggTGGGAATTTTTATATGACTGGCATTTATTGCCACAA GTGAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019735TCONS_00019735Clytia hemisphaericatranscript
TCONS_00019736TCONS_00019736Clytia hemisphaericatranscript
TCONS_00019737TCONS_00019737Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00019735-proteinTCONS_00019735-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000335supercontigsc0000335:265626..271782 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04 0.16 0.09 0.06 0.05 0.04 0 0 0.03 0.04 0.33 0.05 1.02 2.85 0.26 0.22 4.9 0.15 0 0.09 0.37 0.23 0.05 0.04 0.27 0.34 0.03 0 0.31 0.13