XLOC_010856 (gene) - C. hemisphaerica

Overview
NameXLOC_010856
Unique NameXLOC_010856
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000325:288045..291978+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010856 ID=XLOC_010856|Name=XLOC_010856|organism=Clytia hemisphaerica|type=gene|length=3934bp|location=Sequence derived from alignment at sc0000325:288045..291978+ (Clytia hemisphaerica)
ttaaaatgCCATAACTTTAGTTTCGCTTGTGCTACAGACTTGTATGAGCT
ctcatttttcagcattttttattgtgcatcctctgaattaaaatcattca
atgACAATCTCCACTTTATGCACAATATCCTTTTGAAATCAAGGTGGTCT
CTGgttccctttaaaataattttgccctaattcaatgtttaaaatgattg
atatttttatttacaGCATATCCACTCAACAACAGGACCAAGTTTCGATT
TAAGAGCTGCAATCTGGCACACAGGCAATTTCACTTCGCAGGTCAGTCAG
GTTTAATCATGTTGACATTATGTAATCTTTTTATTTAAGAGCAAATTATA
TTTGAACGAAAGGCTTCGAGGCGAAAACAATTAAGAatattctaagaaca
ttctattctaagaacattctgcTTCTAAGAAAAGTACCGTAATATAGTCT
CAgaatgtgaaaataagaacattttaagaacatttaggcttaaccccccc
ccccaaaaaaaaaaaaaaaagtaaaaaaatatgtaaaaaaaaaaacattt
taagaacatttaggcttaacccccccccccaaaaaaaaaaatgaacacct
caacgtttcaaaaatttcaatgttctattaaaaagaaacatgtagataAA
CGCATATAAGAACATGTAATTCTTGACACAGACTGGGCTGTTCttattaa
tttaaaaatttcaagtttatatggccatttctgaaatctggggctcagat
tgttcttaatttgttctcaggttttggccaattttcagcctcatgttctc
ataaaattgtATACCTTATTTTCCCAAATGAATTTTTGCTCAGTGAagct
attatacattatactgtaattttccttttatttttacatacagTCCACAC
TACTATGGCGAGATGAGAAAAACcgtggttggcaagataaaacgTCTTAT
TTTTGGCAGCTTTTACATCGACCAATGTATGGCTTAATAAGGTTAGTATA
ATCATTGCAAAAGCTACTATTCTGGCATATCTTTCtctaagaaaatgttt
ttttggtgaaatggctaaaTATGAAAAGTAAGTAAATAAGTTTGCGACCT
CAATCGAGGGTGCCCCGAGGGCGCCGACCAGGCCCACTCCTATCGCTGGA
TTTCTTCACTTActcttgatccgtctctttaaaTTGACTGGGGACCAAAC
TCATAACCCTGTTGAAAATCGCGTGTAAGTGCACTTAACACTCTTTTACT
TTCTAGTGAGCACATCCACTAAGCGCAGTTAAACACACTTTGGCGCACTT
ATGCGCGCATAAACGCAAAAACGCCTTAATTTTACAAGGCGCAATTAGAC
GCACTGAAACATACGTAAAAATCTTGATATTCCGACGCGATCATCAAATA
ATAGGCCTAAAATTCAAACTTTGACGTAActtttttcagttagaatagaa
acttgaaattttacatgcGTCTTAAACAACCTATTTCAAAGCTTTCctga
aagtttcatttttatagCTTTAGTGGTTTTAAAGATATGGAGATTTTCCT
AAAGGATGTGAAAATGTGCTTGTTTATAGATTTGACGTCAGTTTCTTTTC
TGAAGATAAATTCACGTTTTACAAAGCAGTACTTTTGATGATAAAACTAA
AGACAAAAAATGTAATGAGTAAATCCGCGATTTGAGTTCACGAATAATGC
ATCTTAATTGAGGAACCATTACATTCACCAACAGTGCGAACACGACCAAC
AAATTGCTTcatagattttctgatttcagGTAGGTTTCTCGCGCATTCCT
TCCAAACAGACTTGATCTTAGAAATGATTTCCTCCTCTGTTTCAAAAGGC
TTCTTCAATCTTCCTCAGTACACCTTGCGTTTAACTTCGTTCCAAAAGTA
GTAATATAAAGGATTACTGTCGGGACTCTTCGGAGGCCACTGATCTTTCT
TAAAGTATCGTCTCGGTATGGTTTCCTGCAAAAAGTCTTGGACAATGTTG
CTGGTGTGCGATGAAGCTCAAATCCATATCTTTGAAACTACTAAAGCTAT
AAGAATGAAACTTTCAGGAAAGCTTCGAAATAGGTTGCTAAAGACgcatg
taaaatttcaagtttctattctaactgaaaaaaagttacgtcaaagtttc
aattttaggccTATTTTTTTTGGCACACCCGGTACACCTCGTGTAAACAC
TTTTCACTTCTTTTTGAAGAGAGAGGGGGATTTTTCTATTGCGTATAAGT
GTGCCTCTCACTCCTTTTCCCCTCTGTTCCATCAAATCACTTTGTAGTGC
CAGTTAGTGTGCCCGGCAGATAAATGTACTTAAACGCGATTAGGTGCATT
GCTTCACACCTGTTCAAGATCTCATTTTTTTTACATCTAACTATGCACCA
AAATCTATTTAGGTTGAAAGTGTACAAAGATTTAGAGTTGATGGTGGACA
CGGGTTTCTTACAAAATGAAACATTGAAAGGTGGAAAGTTCGGACCATAC
GCATTCAGTCAAGCACGTATGATCTGGTCAAATATGAAGATCGAATGTAA
TGGTAAGTAATTTATTTTGTTACTGTACATTAAGGAGCAATGGTAGAGTT
GGCCAAGTCGTCAGCAcaattgatttcaaagccccgaaggggctagatct
GAAACACCCGGATGGGAAATGGAGCCAATAATTTCCCATCCAGATACGCG
ACccgtttttcgaaaaaattgcgTAATTCGGACAACaaagctacaatcat
ggtcgtagtatttgagaaaaaaggaaaattcctacgaaatcttataacca
caaacgaatcagaagcgctctaaattaggttggaagaagggtagagtttt
aactctgagttttaggatctaaaagttcaagaatagtTCGATAGGGCTCA
GAATGTAGCCttgaagtctataaacccctcccgaattaaAATAcccgaat
aaatttatcaattagctcAAAAGCgacattctcgcccgaactccaaattt
cgaaaaacgaggaaataagctatgttctcaatagattttgaccatgattg
tactttCAAAACGCCATGGTAGTTACAGTCAACtttttctaattcgaact
tctgttATTCAAACTTAAACATTGCTCCTCTGGCCTGAAAAGTCGTCTCC
TTAATCAGAATCCTTATCTTTGATTCGAAGaaaccttgaaaatcgaatat
aAGAGAGAGCCAACTGTATTTACCTCTTTGAATCTTCCCAATCTGGTAAA
TTCGAAACCAGCCTTATTGAGAATGAGTATATACTAACCTTAATAAGACA
ATCTTTCTACTGCTGGTTTTCtgttaatacaccttttcgaccgtagccgc
taattgccgcgcgggcaatttttaccaccctaaaaccgtcctagtctttt
tttcgcgcctGAAGACAATaggaaaaagtgtaaaaaaaggattggaccga
gtttagggtggtaaaaaatgcctgcgcggcaattggcggctacggtcgaa
aaggtgtatagccTATTTCATAGAATTCGTGTTTTTAAACGTGATATTTT
TCTACGTCATTTCAGTAATCAAGTTTTTATTGTTGAACACTCTTTTGCGA
ATTGAGATAACAAAGGCAATAACAAAgagttcttgaattcccaagcGAAT
TGAATGATAACAAAATTCAATTGTTTTCAACGTCTTTCTCAAAGGGAAAT
CTGCATAGACTTGCGCATTTTCCCCCTTTAAATTGATAGAAAATAGCATG
TAACAAATACGCGAATCTTATGAAATAGGCTTATGTTTACCAACTTCTTT
ATCCCATAGATGACCTTCCACCTGAAATCAAGATGcaaatgaatttgaaa
aagaaacgaAGTGCTTGAGATTGTTGATGAAAGAATAAACTTGAGATCGA
CCGATTTCTTTGTTTGGGACGAACAATTTAAAGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019322TCONS_00019322Clytia hemisphaericatranscript
TCONS_00019323TCONS_00019323Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000325supercontigsc0000325:288045..291978 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.24	1.11	0.64	0.15	7.64	10.27	10.93	23.19	7.16	7.84	6.32	5.66	9.05	8.61	0.06	0.23	13.19	18.75	0	0	25.75	27.26	8.45	10.04	23.73	30.95	4.28	1.66	2.52	0.64