XLOC_010811 (gene) - C. hemisphaerica

Overview
NameXLOC_010811
Unique NameXLOC_010811
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000323:17836..25518+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010811 ID=XLOC_010811|Name=XLOC_010811|organism=Clytia hemisphaerica|type=gene|length=7683bp|location=Sequence derived from alignment at sc0000323:17836..25518+ (Clytia hemisphaerica)
GGAACTTCAGGTTCGGAGCCAAATTAaggtttcttatagaaaaaacgtgt
attttattttctagatttttaaattttgatatttagaaaacTGATACGAG
AAACAAAATGGCAAATTCAAGGACAGTTAGATGTGTCAAATGGCTTGTCT
TTGTATTTAATCTTCTTTTCTTTGTAAgtatacactttttttctttatga
GACTCAATATTCACTCAAtattgctaaaaaattaagaatatgctaagaat
caTGGAATTGGAAACTGAACCTAAAGAACGCCATTTTCAGGGCAATATCC
CCGTAAATCATCCCCTAGCAATgctaaaatctttcaaaaaattcatgTTA
CATTTAGCCTCAGTTTAGTTCCTAACTAACGGTATGACCTCGTAAGAATA
CTTTAGAATTTTCCCCTAAAAGGTTAAAGATATCGGAAAAAACAacatct
tattaaaaaaaacgtgtaaaaaagCATTCATCAAGGTTCGCTAACAGGTC
AACACCTTTCTCCCCCTATTTTCTGAATAAAAACTTATTAATTGCGTTAA
AATGTTAAATAGCATAACGGAAAAAGATCTTGGTGAAAACGTGGGCAACG
TCTAATGGGTctttaaagtttgaagtttGACATATAGTATCACCCTCATT
CATTTCGACAggctgaaattatttttttccttctttccgCTTTTAGGAGT
TTCGGATAACACCCATAATTTACAGATATGtgttttttgtaagattttaa
aTCAATTAGAACAGCCAGTGGGATAGCGGACTGAAACACGATAGGGATTG
Atattacaatatttttttcatgactggggatttcaattcttttgttttca
aggtaaaaaattcagtggggatgggaaaaatagtaaatattttacagtga
ggaatttttttatttgattattttcagtggggacaaaaacagaacaataa
ttttccactgtggacgatattttagccaattttttcagtgagaaggggtc
ccagtgggtctgtgagaaggggtgtattaGATGTTTTTTATCTGTAGGAG
TATCAAAACTATAGCTTACGCTTACGTTTACTGAGCTTGTCGGGAAGAAT
GTTGATatacgtgttttttataagaacaaactatataagaacatagactt
cgatggccaaaattttaaaagcaagttaagaacatttttaggcttagaac
tcaaaaagttaagaacactaaaaagcttcaaaaaatttggatgttctcat
aaaaaaaactgtAAATTGTTTATTGAGCTTGTCCGGAAGAAATTCATTAT
CGTTTCGTCAATCGTCCCTCTTCAATCGAAACCAAAACTGTTTCATCAAT
ATATATTATTTTCCACCTTAAaattcttacgcgcacggtaaacctctgag
gGCGAGATGAAAATAGGAAGAAGAGGAAAATAGTCAATCTATAATAAGAA
CTTTTTGTCGAAAATTGAACACGCCCTACTTTTAAACACAATCacaaaaa
cacccccttctcacagacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaacttagtcggcc
ttaattattagtcggccctaattttagtcacctcgtcaaaatttagtcac
taagggccgactaataactaagttttggccatttctaaattgttagtcgg
cccaaattttagtcggccctaattttagtcaccaagccaaaatttagtca
cttagggcacTTTCAGAGTTGTGgatttagggggggggttcaaAAGTTGC
GATATTCACAGTATGTTTCTCAAAATTGGAAAAGTACATCGACATATGGA
TTTAAAACTCCCGTTATTCAGGTCGCAACTTTCCCATAACTCTCAAATGT
TATTTTACTTTCATACCAGCTTTCTGGTTGTTGTTTGATTGGATTTGGAG
TTTGGTTGAACGTTGCTAGAGATGATTGGCAAGGTATTTCAGAGTATGCT
TACATGTCCATCGCTAATATCTGCTTGGCCACTGGAATCATTATTGTACT
TGTTGCTTTTGTGGGATGCTGTGGAGCCATAACCGAAAATAAAATCATGC
TTCTCCTGGTACGTGTCGACCTCATTTCCATGCCTACTCTCTTATCTTTC
TTTGCGAGTGTTTAATAAAGATTACCGCCGGAGgagggcactcgattcaa
aaacgaccgtgAGAACAGCCCAGAATTAGGCCTTTAAAATCAGACCCTTA
cggtgcagagaaaattttgagcGAATTTTACACCTTTAGAGagcattttt
ctcatttttgccGATTTCAACCCTTACATTGCAcggaaaatataccctta
agggccgcacgtatgataggtcatttaccttgagtgccccctgGTATTCa
caaaatattttgtaataAACGATCTCGTATTATCggttttttatgcttac
tgatagcacaAAATAGTGCCCTGTGAGAATGGGAACTCGCCTACAGCAGA
GGATATTTTCTCGCATCAATTAATATCATCAGTATCCTTATCTTCTTCTT
TTGTTCTAAAGAGAAGGGTTCGAAATTTATtgtacttgaagaaaaattta
tttgggagagatttttttaatgttgaaaattcTCTTCAttttagttcttt
attttcctGTTGGTCATATTTTTGATGGAAATCGGATCTGCAATTTCTGC
CTACATATGGCGTGAGAAGGTAATATATTTATAAGtcttttgacatattt
tttctAGAAGAGGAGCATTCGAAATCATTATTCTCTATGATGGAATCATA
TGGGCCTTATGGATGTTTCATGGACGTTATTTTGACTTTctttgtaaaat
gtttttttgttgaaGTTTTGCAACAtgtgtaaaaatgtaaaaacgagtat
ttaaaaacaaattaagagTGGTCAGAAAAGGGTCGACTTAAGGCTCTaac
ataggcggttttagaccgcacatcgaacttatcagaggaagagatttgta
attgtaattttattgtcttttaacgagcgttacACTCTTTctcatgtttc
cgacgtacttgctctgtTCTTTTAAATCCGCCATTGCATAATTATAAGCC
ATAATTAAAAGCGCGTATAGTTGTTTTCCTGTGAAATTTCCCCTTcaatg
taaaatcaaaaatttaaagcATGAGTAGTGAGACCTCTGTCTGGCTTTAT
CCTACCAACTTCTTCATCTTGACTCTCGAATAGATTGGGGTCAGTGATAA
AATGTGGAAAAGTTTACAAATTAAATTACTGTAACCCATTAAGTGCTTCT
GGCATCATAcggacacccctgtctcacagctccgttggaactttttccca
cggTGGAGATGAAAATCTCCATCGAagttttttccattgaattttaaatg
tGGATGAAAAAAGCCTACTTCCCAGTGGTGCTGGAATTGTAAGGTATTTT
TCACGCCGGGACGGGATTTAGGTCAAATTTTACATTAGGATTAGGGGCCC
ACCGGACACATGGGTGTTTTTAAAAACTCTTTTCTTTCATAGATCAACGA
GGAACTGAAAGATCAACTTGAGCAACGAATTCCTGAGCGTTATTATACTG
AAACCGCTGTTGAACTTGCTGTCAACAAAATCCAATCCCATTTCAAATGT
TGCGGCTTGTATAACAGCTCTGATTGGGGAAAAACTACTGCGAGTACGAG
TAAGTGACTTAGTAAAAGTGTCCGGGGCACTTAGCTTAATGGTCTGACAG
AGAACCGTACTGCTAGAGTTGGCTCCGTCAGAAACAAAtatttgatagaa
tttgaaccCTGACAGAGGAAATTATGAACCTATcaaacaccaaattttga
acTTGATGGACGAATTTAGACCAGAGATTACGTTTTTGAAATTTACAAGA
GTTGCCAAATATTTAACTTGAAAGCCCCTCCTCCCCATCATTCTAAGACA
TTCTAAAATACAAACAACAGAAAGATATAAGGTATCATCTAATTTTAAAT
GAATGGTATTCATTCGATTGACCAaatcaaattttgacttttaaatggAA
AGGAATAATCTAATACCATCACATCATCAAACACTCCCAAAAAGATTAAG
ACGACACCACCGAAAAAGCTCATTATAAAacgtcttcttcattttcagac
GAGCCAATGATTGACCAGAGTTGTTGTATTCAAGACAGCGCCCATTCCAA
TTACAATTCCAACTGCGTTTCAAGACCCTGGGGAAGCATTCAAGCCGATG
ATGAAAAGTTGCTGAAAGAATATTACGAGGATGTAAGTTAAAAGTCATGA
TAAAGTACGACCTGTGCCTGGGTAAATGTAAAGAAAACTAAATCCTCATG
ATTTATtgtatatttcaaattttataaccTAAGAGcttgatttcttattt
ttttaattttattgccTCAGGGATTGATAGCCCATTGATTGAACGAATAA
TTCCCACAGCCGCTCCAAACTTACTTAGAAAGAcgattttatttgatttt
tacttacatgaaatattttcattttctttcgaTCACATCCTAATTTGGGA
CCAATCGATTACTTTTTGAGACAGtcaaatgaaatattttaaactatTAG
CCTTTTAGTCTATTAAGTCTTTTGAGATAATCTCCCAATGCCAGGTGCCA
ATTGACAAAAAACAGTAATGAGGAGGTTGCATAAATGGCAGTTTATATGA
GCCAAGGACCACTTTTCTGGACCAATTTATCCAGAAATTTCGGGAACCTC
CATCTTATCTCATTATATATATTTCGGCATTCAATTTTAGGGTTGTTATG
ACAAGATCAAGGActtcatcaaagaaaacatgTGGTTGTCTGTGCTCTTT
GGATTTATCTTTGCTTTCATACAGGTAAAGAAATTAAAGTATtattaaat
tttataaaaattcttaGGTCTGTTCAAAACTCTGGTTTGCATGATTTGGT
TCTTTTGGTCAAACTTTACTTTGACCAGATTGTAGTCGACATCTTACAAA
ATATTAGATATATTCGAGATGCAGAAGTGCTTACATGATAACTCCTCAGA
GCCTCCCTTACCCAAAGGGGAGATACGATACTGGTACTATATCTCGTCAA
AATAACCACAGTCCGTAACTCCGTATAGAAACctgctgggaccccagccc
cactggaaaatttggctaaaaactTGTCCCCGATGGAATTTCAGCCTTAC
Tgggaattgactttgatttcatcttcatatgaaattcaatgtttaaaaat
tgcactccccGATGGACTTTTTAACAttggagcaatagaatttctatccc
cactgaggaaaaaagtttcaccggtgTGTATAGAAACCCCGGTCTTGAAG
CGTTTGATTTCCTTCTATTGTTTATGACTTGAATAACTTTTGCTGctaaa
ttagtttgttttgcttactttttgatcatgtgatcaaGTTCTGAACCAAT
CCCAGGAGGAGGATTTGGAAAACATAGTCAAAAACTGTTCAATGCTANCA
AGTTCTGAACCAATCCCAGGAGGAGAATTTGGAAAACGTAGTCAAAAACT
GTTCAATGCTGTTGTTATCTTTTGTCATTAACAACTTACTATATTTTTTA
GATCATTGGTATGGTATTGTCAATGTTTTTGTATTGCGTGTTAAGAAGAA
ACGAAATGGTTTATTGATGATTTTGAATCACTACAATTTTAATGTAACGT
AAACAAGCTTGAGATCTGGACCTTGCCCACTTGAGAGCTGATATGAAGGG
CCATAACTTGGGAAAAATATGGTAGCtgcaaaaatgatcagtcaAAATGT
TTGATTCTTGGGGTGGTCTTGGTTAAAATTTCATCgtttattacacgttt
tttacaagaacatccaaattttttgaagtcttatgctttttgtttttata
taaaaaaacgtgtacaaaaaACATGTCACATTGATTTTGGACATTGAACT
GATGTGACAGTATTTATCGCCGAATGTGACAAAAATGAACATTTTATGAT
TATGATACATTTTATTTAATTAAAAGTaagtttaagttttttttctttgt
ttctgtAATTAGTGATTGCGtatttaacatattttatgattttataagAT
TTTATATTAAATTTACCTTTGGAAAGGCGATTTGATCAGGTTTTGGATTT
AGTTCCACAATTGTCCTTTACGAGTTAGAAAATACTACCGTGAGTATCAG
AGCGTATATAGTAAATTTAGATTCTATTCAGTGCGCGTTCAGTGACAACA
Aaaaaacgccaaaatttgttagaatggctatttatgcttcaatttacatt
aaaatatcatttttcagtagtaaactgtaaatgaatgataaaaaattaac
gccaCTTTCAAGTAAAATTTGCTAAGTTTTGGCCCTTTTAACATCGGCCC
TTTTAACAttggcccttattacgccaagagCCTAAGAGCTaagagcctaa
aaataacgccaataagggccggtgtaaaaagggcctaTAAGGTAATTGTA
ATGTGAACAAAACATGTGCGATAAAATCCTTATAGTTTGTCTTTGCATGC
TAAATTTCAGTGAAAGTTAAAATGTGGTGAGCGCTCACAGTAAAAAATTG
CCAGATTCATTttagaatatatttttattGGATATACTTGAATTTGTTGG
ATATCAAAATTTCTCTGAAAGAGAATAAGACACGCTGCATGTCCTCATAA
TTTATCAACAACAAGGTGTTTTTGCTGACctaagattttgcttggctgga
aTATTAAGATATATTTAGGTCATGGTTGTTTTCATTAATCATCTCGTGAA
AATTTGAGCATTTTAACGTCACATTTGAACTATTTTTAGTTTGTAATTAA
CTCCTGgtacaataaaaaagaaaaaagaaaatattgctAGAGTAtgaaat
caatttttcattcgcaaataaaccaatcctcac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019258TCONS_00019258Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00019258-proteinTCONS_00019258-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000323supercontigsc0000323:17836..25518 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TSPAN8PREDICTED: tetraspanin-8 isoform X1 Homo Sapiens
TSPAN4PREDICTED: tetraspanin-4 isoform X3 Homo Sapiens
TSPAN9tetraspanin-9 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.81	0.7	1.25	1.78	1.39	0.86	3.35	3.98	3.93	3.59	6.49	3.11	10.76	9.28	6.08	4.19	5.23	4.94	10.67	16.44	10.3	9.15	4.86	5.51	2.1	3.45	7.5	4.7	1.87	2.11