XLOC_010635 (gene) - C. hemisphaerica

Overview
NameXLOC_010635
Unique NameXLOC_010635
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000314:128391..133461+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010635 ID=XLOC_010635|Name=XLOC_010635|organism=Clytia hemisphaerica|type=gene|length=5071bp|location=Sequence derived from alignment at sc0000314:128391..133461+ (Clytia hemisphaerica)
GTTTCAGTTATTAGATgataatcaaaaataaaacaaaatatgtCGTTATC AAAAACTTTCTCTGATTCAAGAATTTATGTTGGTAATTTGCCACAATTTG TGCGTCAAAGAGATTTGGAGGATCATTTTGATAGATATGGTAAAGTGCGG GCTGTTGACATCCACAGTAGATTCGATCCTGCATTTGCTTTCATAGAGTT TGATGATTCAAGGTAAGCATGATCGTTAAATCCAAAAATTTAGGCAATAT AGGTTCAGGTGTTGCGCTGTTTGCCATTAGTCatcattttttattgaaac gaACAATGTTGAAATTATTTTAATCATAAAACTTGTGACCAAGCCTTGAC CATTCTTTAAATCAGTGGGTAGGTCATGGGTCTTCGCCAACCAGTTTGCA CTGTGTTGGATTAGTCACAGATAAAACTTGCTATGAACACATTATAAACA CCTTATCACAGGACAGGGTAGTTTCTCAGTTACGAAAACAAGTTATTGAT TGAATATAACTTTCCTTCTTTGGTTTCACTTTCAGAGATGCAGAGGATGC AGTTTACGGAGAAGATGGAAAACGTTTTGACGGCAACAGAATCAAAGTCC AATTCCCAAGAGGCACACCAAGACAGGCTGGAGCAAGTCGCTCTGGTCGA AGTAGTTACACTAGAGGTCGACCATCAGGCGAAAGGCGTGGCCCACCAGA ACGGACCGATCATCGTATCACCGTCTCTGGTCTACCTGCATCAGGCAGTT GGCAAGATTTGAAAGATCACATGCGAGAAGCTGGCGAGGTAGTGTATGCT GATGTTTACAAGGATGGCACTGCTGTTTGCGAGTTCAGAAGTTATGATGA TATGAAATGGGCCATCAAAAATCTCGACGACACCAAATTCAAATCACACG AGGTAATTTAGAAATTGGGTCGAAACTTTAGTCTCGaccccgggtttttt tttttttatattactGATAATATTGACTGTATGTTTCAAATAGTGTCCAT GACCTCTTTTTCCtagtttgaaatgttttttttgctgaaaaaatacTTCT AATAATTTAAACAATCTGTTGTCCTATTAAATACCTTACACTTGACTCAT TTGAGTCCGAATTATCGAATGTTTGGCCAAAGTCAAATAGAAATTGTATT AAAGTGTACTGTATTTTCTTCCTCACTCTAGCTGGGAACCATTCTCTCAG TTTATACATACATACATCCCATCACCTGAGGGAGCTGTTTCCTGGTGCAT TCTTAGGCAAACAAACAACCCAGGATGCTTTGCAACTAGACAAACGATTA TTCCCAGAAGGCCATAGTATTTGGAGCCTCCACCTTTGCAATCAACTCAA GGAGGATGCTTAAGGAACTATCTAACCAAATTGTCGTAAGGTTGATGGAC CAAACCACCTACCCAAACTGTTCCTATTCATTGATGCCTGATAGCCTTTT TGCGAATTGCAACGTGTAGTTACTCATCGTAGTTTTCTCTGATAACCATA GGAACCATTCTATTTTGCCACCCAGAaaccttatgttaaagttgtttcAC GCACAGATTAAAATAACAAAGCAAAATTAGGGACAATATGGCGTTTCCTA TAATTTTCGCCGTAAACTTTTGCATCAGTTCATTTTGGTAAAAGATAGAC TGTTATGTAAAGTCTGTCAACTCAGATCTTCCTTCTTGAAGCATATTGAC CCTTTTTCCATTGGTGTGAACAAACGGTTCGCTCCGCCATACTCGAGTTG ATAAGGTATTTCAGATTATGCGACATTAAAAACAATAAAGCCAATCCCCG ATATGGAAGCACAAAAAGCAGCTATCATTTTTACGATAACTATCCGTCTG TTTGTTTGAGGCTTTCTAAgtataatttttaagaataagagTCGATCTCC TTTCTactgataaaaaatttattgattttttagaaCGAGACTGCTTACAT CACAATCAAACGCGATCGTCCACGGCGCTCACGTAGCCGATCACGCACAC GATCACGAAGCAGATCGCCAAGAAGGTAAGTCTTTAACAGTGATTAAATG ATGAAGTCCAATTAAACCGATTTCTGAAAGTCTTGTTTCTCACTTGAAAA TGATAACGAATCCAGTTGGATAGAATCTCTCGCTTATTGGATAAGGATTA CTATTCGATTATTCCTAAACTATACTTTCTATAATAAGAGGAGACAAAAT AGTACACTATTGAAATCATTAAAACAAATGAGTGATCACGGACATGTTAG CCAACGTTTATGACGTATTTCCTAGTCTATACTAGCCACTGACGTGACTT TTGATCACTTTACTGGGGAAAGAAGTCGTATCCTCAGGTACAGTATCCTG TTTATTTGGCTCACATGTcctagtagggggccaagcctggggttccgtga catcttttctacgacctaaccatttttagtctattccaaagaacattata ttacaagatatttttgagagggaggacgcggattaggcccgggtaaactt ttatgaccaaaatagtgacgccataggcaaaactgcaaagGAAAATAAgt gtcaaaataaacgaaaatgattggtaccatctgatagagcatgaaattct gagcaaaaaaatgtattacgacaactctctgactaaaacccaaagaaata cagccgcttgaagttcaaaaacataccgacgtcaaTACGATCAAGACagc aagatttgacgtcaaatcacagtagagttgacagttagttggtcttaaag cggctgtattcctttttgtgttttagtcagagagttgttNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNtttagtcagagagttgttgtaata caattttttgctcagaatttcatgctctatcagatggtaccaatcatttt cgtttattttgacttttgaaaataaggtATTTCTCTACCACTTATTTTCC TTTGCAGTTTTGCccatggcgtcactattttggtcataaaaagttttccc ggccctaatccgcgtcctccctctcaaaaatatcttgtaatatactgttc tttggaatagactaataatggctaggtcgtagaaaagatgtcatgGAACC CAAGGCTTGGCCCCTACTATCCGTGATCACTCAATTGTTTTAATGCTTTC AATAGTGTACTATTTTGTCTCCTCTTATTATAGAAAGTATAGTTTAGGAA TAATAATCCTTATCCAATAAGCGAGAGATTCTATCCAACTGGATCCGTTA TCTTTGAGAACATTGGGAAGTTGAAGTCTGTTGAGATAAATACAGACTTC TGGAGTACAAGGGTTGTTAAAATGTTGTGTTTTCGCGAACCAGTCCTCTG AAAACCGACCCTAAGAGAAACTTATTTTTTGCGAAAATGTGATCCTTAGA AAgtaaattttcgaaagatttcgTTACCATAgagagatttttttcaattt tcatcaaTGGTAGTTTTCATTTAGTACCCTAAAAAGACCTAAATAAAATA TGGAAAACCTGGAGTCTTCGTgagattttttgactttttggacctacctg gaggtcctataaattaacctgtgttcatCCGTCCGTCCgcccgtccgtct gttaccaacttttctcaggattgaatcataggaatcttttgatttttggt acaaaggtgcaaaatggtaatggccaaaatgtgacggaacccgattttcg gaaaaaaaattttttgggcaaattaggtctaaaaaacggttaaaaaacgG GTTtcttggactttgtgaaaaattggatcattaattttttctgaagaata tgtgtgtttagataGGAAATTTTGGTcgtttggcgtgtttttataaaaaa tataaccaaattcgatatttttttataagcacattatcaattacttaggt attagcttttctcgagattggctctttcaatctttatgattttttgcaca aaaatgcataactataaaccctcgaatgtgacggagcccgattttcgaaa gaaaatgtttttgggcaaatttgggccaaaaaacggctaaaaaaaaacgg ttttttgcatgaaagtaggtaaaagatggctcaggcagatttttgtaaaa aaaagaattttcaactcaaaaaaagcatctttatctataagaatcactat tgaaaagcatacatcaatgatcttagccaaattactcaattctttgatga gatagatgttttttttgctcacgaagtcttgaatatgaaagaatatttca agagcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNtttggtttctaaacgttttttttataagaaac aaacgactaattttaatagatcgtcactatttgtgttctgaatgattgtt tacagTCATGCTGACGTAGATGtcaattatatgtgttaaatgcataacca ggtaggtccataaaagtatcacttgtttttattgtaacctttagagagac ttgGGGGAAGGAACTGTGTCTGCACATTACCAGCACCTATTTTACGTAAG CCCTTCCGAATATAGACTGCATGTGTACTTTCTTTTTTCGTATTTGATTC AGATCTCGTTCAAGAAGTCGTTCGCCGAAAGATAGATCAAGAAGTCCTTC TCGTTCACCTCAACGCAGCAGAAGTAGAAGTCCGTCTCGTAGCAGAAGTC GCAGCAGAACACCTTGATGTAGAACGCCAAGCATTGGTTTACGACTTGTT TTTATActgttaaaatatttcatttcatgGTTGCACGGACGGATTAGTGA TATTTGAACCAATTTGGTTTAGTATAGTTTTTTACGCTCACTTAGATACT ATGTTAAATATTTAGACACAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018966TCONS_00018966Clytia hemisphaericatranscript
TCONS_00018967TCONS_00018967Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018966-proteinTCONS_00018966-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000314supercontigsc0000314:128391..133461 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SRSF9serine/arginine-rich splicing factor 9 Homo Sapiens
SRSF1serine/arginine-rich splicing factor 1 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
138.21 128.01 181.4 200.68 178.48 147.78 176.8 182.72 116.11 97.75 102.8 88.43 45.57 37.39 120.12 97.56 236.28 196.22 37.17 35.97 117.1 108.81 103.84 91.15 178.25 152.83 85.35 51.3 72.94 65.2