XLOC_010596 (gene) - C. hemisphaerica

Overview
NameXLOC_010596
Unique NameXLOC_010596
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000313:4047..8218+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010596 ID=XLOC_010596|Name=XLOC_010596|organism=Clytia hemisphaerica|type=gene|length=4172bp|location=Sequence derived from alignment at sc0000313:4047..8218+ (Clytia hemisphaerica)
acggtatattcAGTAGAGCACACAGTCTTATTTTTGCATCCATAAACTCA
GCATCTAACAACACAATTGAACCACAATTTCTGTAACAGAGACACCatga
caaatgaaatttcactgCTAGCACGTTGTTTCTAAtttcttttcattcaa
aatggccATCGCTGATTGGAGAATTGTAGAGCGCCCACTGCCAAACTGCC
CACTGCCCACCACCCTAAATATAATGAACAAATTACGGGTGTGTAATTTG
CCACTTGGATGACATTATGTGCTCCATCATGATGCTGCAAATTTCTTCTC
CTTCATTTTGGAGAAAGGCAACTTGGAGGAAAGTTGAAAATGGTACCAAA
ATTTAGCTCATGAAAGCTGCTACTCAATTTTACAAACTTTGAAAGCTCCA
CAACTTGCtctcaattttacaaaaaatcgaGCTCAAAATTGCACGGAAAG
CTGGACTGATATTATGAAGAAAATTTGGTTGGTTTCCCAACAAGCCAATG
TTTGACAGTAGATCGATTTCTAGACACTTCAAAAGTTCCTTCTGATCTTT
TTGGTTTTACCATACAAGTGACAAGAGTGTCTGCATGTcaagctaaaaaa
aaaaacatacaatCATTAGGCTAGGTATGGATAGGTTTTCTGTCTCACTG
TCTGAAAGCGCCTGCTGCTTgtgaattttatattttccaaTAAAGTCTTT
TACCAACTaaacaacaattttttatcaaccaatattttgaaaagtaaaat
gggtgcaaaatgaagatattttatTCTTGCCATGTTAATATGAGCTTCCT
TTGTCTATTTCAGTATTATTTGCATGGCAGTTTGGGTTTTGGTTTTCTTT
TAAACTTCAAGCTAAACTATAAGCAATGGGTGCGCGTACATATGTCAACT
GGGCTAGCTTAAAAAATTGGAACATTGAATTTtagaatcaaaataaaatt
tatttgtcaTCTCCTCAACAggtgaattttcagaagaataAGAAGAAATC
AATACATACAGTACAGATTTAGATTTTCTTTCTGAGTACTTTTTGATTGG
ATCAATCATTTCCTTTATATTCTGATtttgagtttaatattttctGCTTA
TTAATCAGGTAgatccataaaagtatcacttatttattttagttttttaa
agattgcgTAAAAGCAAAACATGAGTTCAAATCGCTCCATTGTTTCTCAG
GTAAAATTTTAATGTTGTAATTGATATTTATAATGTTTTCATTCTTTTTA
AGATAATTCATTTTCAATGGATTAAATACATTAAATACTCAATTAGTAAT
AGGTTTCGTTAGAATCAATGTTTAGTTTCAGCTAAAATTCTTGGATTGTC
TTCATTCAGGGAAAAGGATGTATATACAGTATTTTATTTCTTCACAATAT
AGATAGAATACTGTGAAAGAAGAATCAAGAGTTATGAAGATCGTCTGGAT
GACATTGGCATGACTCTCCGTAAAGATAAACTAGCAAATGAAAAATAGTA
AGTCCTTGATTTActgttataaaatatttttaaatttttcaatcagAAAC
ATTTTCATGAGATAATATTTCACCAAAACtctctttatttatttttatcc
ttTACATTCTTTCTTAGTGAACAGTTGTCTGAAGAGAGGGATCAATTAAC
ATCTACTGTTACTGAATATAGTAAGCTTGCTTCTTTGCATTATTTATGCC
TCATCATTGTGCCTTTTTGATGTGTAAAGTACaagttgaaaaatgaataa
atgaCAGGCTAAGTTCcaaatatcaaattaaaaaaactttcctGTCATAA
CCGTATTTTGGATGAGGTTGTTGCCAACTTTAAATATGTCCCAAACCTAC
AGCAGAACTAATTAAAACTGTGATAGAACTTGATTATTAGTGGGGTATTA
GCAGATAGAAATACCAGGTGTGCTAAAAATAAGTTATGTACCCTCTTCAA
AGTGCAATTTCTTGAGATCTCCAAATAGATTGAAAGTTCGACAGAAAGTA
AATTTAATCCATTTACGAGgcctttaaaatatattttaaatattttttac
tgCAATTAAACTGCTTTATTCAGGCAAAAGGCAATAATTCACTGTTCTGT
TTTTTAATATAAATTTGAAAGGTCTATTTTAGACCGGTCttagaattttt
agaaagtgatttattattttatttcagcttataacttttgatctactgga
ccaaatttgataaatgacgtATGAAAATTTGAGTTTATCTTTCCTCTTGT
AGATAAAAAGCCTTTGAAAAGTCatttaaattgagaaatttcacATCAAA
CAGGAAAACTTATTTCTTGCACACCTGGTAAATAAGTTTAATACATGGTA
AGAAATGCTGAAGATCTTTTAGAACTTTTTAGAACTATATATTCCACATG
AACGAATCTTATAACTCAGTGAAtctgtttttgaaaataaataaaattta
atttattgtttatttttagaAACCCAGTTGAAAGAATTGCGCCATGAGAA
CAGAAGAAGCATGATGTTGTCAATGGCAATCATGTTATTCTTTGTTATAG
CTTATTTTGCATTTGTACAAAGTTGAATGGGTGGGGACTTCTTAAATAAT
AAATCCTATTTGAAGGGCATTTTTGCCTTCATGGATATATCCTAAGGGCA
TGATGTttagaatttacaaaaaaaattgatattaatGCCTTTTTTAAAGC
AAGCTCATTCTGTAATTTGCTAAATCTTGTTGGGTCACAGATTTTTCATC
CTTACCTGGCAAACTCTTACCCATTCGGAAAAGAATGTTTTTGGAGACTT
TTTGTGTAAAGTATAAAATTCTGAAAACAAATACAGCCATTTGAAGCTCA
AAATTCTGACAGATATTACAATATAATTAATGTCATATTTCGTCGTCGAA
GCAGAACTTGATCTAAATTTTGAGCTTTATGGCTTTCCCTTATTCGATTC
CTTggatatattttatttatgtatagaactttggaaaatttcatatttat
gTAACTTTTGGTACAAGGTACATCATTTTGTATTGTTATATCTAGAGAAT
TATAGGGCTTATCAAATAAATCAaccaaaaaaattgtatttgtaTCTTAA
AATAAAAGGGATCTGCTGTTGTAAAAAGCTTGATTTAATTCTGAATTGAG
TTTAGCATTAAGCTCTTCACCATCATAGTAACGAACAGGGGAACTCAGAA
CTGCTCtctgaaaaagattcttttcaaaTGGATGAATTTAAAGTTAGGGG
TTGTTTAAGATTGAGAAGTTGAATATAACTTTAATCTATTTCAGCAGAAG
AAAGAAAATCTAGaattcaaaaacaaatcaaaaagatGCCtccaaagaaa
aaagtaaaaaagaagcGTGCAAAAAGTGCAAAAGCTAGTGAACCAACAAT
CGAAGAAAAATATCAGCAAACTATTCAAAAGAttacttctctacaagatc
atCTGGCAATGCGCACTGAAATAGCACGTCGTTCACAGCTCAAATCACAT
GATTTACGAGACCAGATGAGAAAAGCTAATGATGAGATAATTGAAGAACG
CAAAAGCAAACACGATATATCATCAGATCTTATCAGGCAATACAAAAGTA
TGCAAAAAGATTTGACGCATAAGACTTATCTACTGGAAAACAAAATCCTT
GATTTGACTACACGTTTAACAACTACTGAACAAGAATTAGCTAATGAGCG
TACCGAGAAACAAAGAATCATTGAGGAAAAAGATTCAGTGATTTTTAAAT
TAGAGAGGAGGCTTGATCATATTGAAAATGCatatgagaatattttacat
GATGCTTTTGATGCGATTGTAGATAAAATGCAAGTAGCTCGGAGTGCTTG
GCAAAATGAATCAATGGAAATTCAAAGTAGAAACAAAGCTTTGTTATCAA
AGTTTGGTTTGAATCCATTAGAAATTTAAACATATAGTTTGTTTTCTATA
TTAATTTCTTAGCCTCGGGCTAATTAGCTGAGGGATAAACTATAACTGGC
AACACAAATAACCATTGTATTATTTGCGTTATACTAGAGTgtaatatttt
ggaaaatttgtacATAAATAATATATCGATGATATTTTTATCAGATGATG
AGTACTAATATATTTCTAATATCAGAATAATGTGTTTTAAaattgatatt
catgatgtaatcttttatacag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018903TCONS_00018903Clytia hemisphaericatranscript
TCONS_00018904TCONS_00018904Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018903-proteinTCONS_00018903-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000313supercontigsc0000313:4047..8218 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
40.59	37.1	19.3	16.57	37.54	27.41	19.14	19.2	19.49	16.84	19.23	17.18	7.7	6.22	7.35	9.79	9.58	10.17	4.86	6.49	9.4	9	25.94	26.63	8.9	11.29	10.76	8.65	9.96	10.66