TCONS_00018903-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00018903-protein
Unique Name	TCONS_00018903-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	212

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00018903-protein ID=TCONS_00018903-protein|Name=TCONS_00018903-protein|organism=Clytia hemisphaerica|type=polypeptide|length=212bp
MAEERKSRIQKQIKKMPPKKKVKKKRAKSAKASEPTIEEKYQQTIQKITS
LQDHLAMRTEIARRSQLKSHDLRDQMRKANDEIIEERKSKHDISSDLIRQ
YKSMQKDLTHKTYLLENKILDLTTRLTTTEQELANERTEKQRIIEEKDSV
IFKLERRLDHIENAYENILHDAFDAIVDKMQVARSAWQNESMEIQSRNKA
LLSKFGLNPLEI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_010596	XLOC_010596	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00018903	TCONS_00018903	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 151..171
None	No IPR available	COILS	Coil	Coil	coord: 62..82
None	No IPR available	COILS	Coil	Coil	coord: 119..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37

Blast

[Close]

BLAST of TCONS_00018903-protein vs. Swiss-Prot (Human)
Match: CC153 (Coiled-coil domain-containing protein 153 OS=Homo sapiens GN=CCDC153 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 3.647e-17
Identity = 54/199 (27.14%), Postives = 107/199 (53.77%), Query Frame = 0

Query:   16 MPPKKKVKKKRAKSAK-----ASEPTIEEKYQQTIQKITSLQDHLAMRTEIARRSQLKSHDLRDQMRKANDEIIEERKSKHDISSDLIRQYKSMQKDLTHKTYLLENKILDLTTRLTTTEQELANERTEKQRIIEEKDSVIFKLERRLDHIENAYENILHDAFDAIVDKMQVARSAWQNESMEIQSRNKALLSKFGLNP 209
            MPPK K K K++ + K      ++   E +++  + +   L+DHLA+R + ARR++     LR +++    E+   R     I +++ RQ  ++Q+D+  ++  LE ++  L  +L   ++E A  R E ++ + E+D  + +L   +  +E  YE ILHD+ D ++ K++  +  W   ++ + +R+K    +FGL P
Sbjct:    1 MPPKNKEKGKKSGAQKKKKNWGADVVAESRHRLVVLEKELLRDHLALRRDEARRAKASEDQLRQRLQGVEAELEGARSEGKAIYAEMSRQCHALQEDMQTRSKQLEEEVKGLRGQLEACQREAAAAREEAEQALGERDQALAQLRAHMADMEAKYEEILHDSLDRLLAKLRAIKQQWDGAALRLHARHKEQQRQFGLTP 199

The following BLAST results are available for this feature:

BLAST of TCONS_00018903-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00018903-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CC153	3.647e-17	27.14	Coiled-coil domain-containing protein 153 OS=Homo ...	[more]

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TCONS_00018903-protein (polypeptide) - C. hemisphaerica