XLOC_010544 (gene) - C. hemisphaerica

Overview
NameXLOC_010544
Unique NameXLOC_010544
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000309:235535..239614+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010544 ID=XLOC_010544|Name=XLOC_010544|organism=Clytia hemisphaerica|type=gene|length=4080bp|location=Sequence derived from alignment at sc0000309:235535..239614+ (Clytia hemisphaerica)
GTTTTGCCGGACAAAGAAAACAACGGACTCAGAGTTGTTTATAATAAGGT
AAGTTCTTCTAGGGGatatttgttttattgtttttgtcgATATTGAATTC
AACAAATAATTCTTGATAGCTTCAAACTATACCCGGACCACTGCCCTACA
GGAAAATTGGACTAAAATTTCATCCACGGGGAAAACATGATTTTGATTGA
AACTTTTATCCCCACCTGTGGGAAAGATTTCCATCGTGGCCATGAGACAG
GTGTGTACGTATTCCAAAGACAAACCTTTCAGAAATCTACTGTATGTAAA
TTTTTCTCATGTCCTCATGGTGTTTTAGCGGATTCCAGCTTGCACCAGTT
TTTTCAGTCTTAATCCTTTCCAAATTTTTATGTTCTTTCTTTTCTGTCgt
tcttatttattttgaatctttATCTTTGTTCACAGATCTACAAATTGAAA
GATGGAGGACATCATTTGGCTGCACACGAACAAAAGAATATTCCACTTGG
CGGAGGAGTTGTTGATATTCCAAATTATCATCATCTTCATATTGGAAACA
TCTTTTCGAAAGATCTCGAAGAAACACGAGACCATATGTGTTTGGTTGAA
ACTGTCAGAGCTGTAAATCTTGAAACATATAACTAAAACATTTTATTATT
CATTATGCTATTATAGAATTTATCTAGCAGTCTCGTCATAGTTATTTAGT
TAATCTTTCACTCATATGTAACACTTTTTGGATTTACTGATGGGTTTAAT
ACAGTTTTGAGTGTCATACACNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCAATAAT
TTACATcacaaattattttgaaaacaaagggGCTTAAAACAAGGTGGTTA
CTCTTGACAACTGGAATTAATTAATACATCAATTGAGGCCGAGTCAAAAG
TTTAGTATAAAAGGAGCAAAAACTTTCCCAGTGAATCATTCACAGAAGAA
ACAAGAATCAAAGAAACTTGCAACAAACAATCTCCAACCACTAAAACAAT
GGCTTCTGCAGGCGCACTTCTCTTAAATCAAGAAGTCCCATTCATCATGG
AGCTAGACGCTGAAGTTAACGGAATCAGATTTGCAGTTCGTGGCAAGGGA
ACAGGGGACGCAACAACTGGCATCATCGACACCAAATTCGTATGTACCAC
TGGTGAATTGCCAGTACCGTGGGCTTCAATCTCAAGCACAATGGCATATG
GAGCTTTGTAAGTATCTGATACTTTTAACGGAATAACTAGAAGACTACAA
CCAAAAGTTCTCAGTTCAAGTCCTCGTTCGATCCATAGATAGCAAACCCT
GGTCATTGTAAACCTTGTGAAATCACGATCGCTATGATTCCCCTATCCTG
GGTAGATCCATAACATTTGCATAGGGGGACCGTCCTTTCTTTGTAGTTct
attagcctatttcataggattcgtgtttttAGTACATGATACTTTTCTCC
ATAACTACAGTAATcaacttaaaaaaaatagaatgtAACAAATGCTCGAA
TCCTTTGAAATAGGATATCACCAATCTCTTACTCAAAGTTCTGCCTTCTG
TATCATTCTTATCAGTTTCtatatcattcttatcaaatttctttcatttt
tagatGTTTTGCCAAATATCCAGACAgtgttaaagattttttcaaatcaa
CAATGCCAGATGGTTATATCCAAGAAAGGACCATCAACTTCGAAAATGAT
GGTACATACAAAGTTCGTGGTGTAGTTACTTACGAACATGGTTCTATTTA
CAATCGCGTCACACTTAAAGGAGAAGGATTAAAAAAAGACGGACTCATCC
TTCAAAAACAATACGAATTTTGCTGTCCGAATAGTGCCGTTTACGTTTTG
CCGGACAAAGAAAACAACGGACTCCGGGTTGTTTATAATACAGTAAGTTC
TTCTTTTTACgagatattttttttattttttttgtcgatATTGAATTCAA
ACAAATAATTCTTGATAGCTAGAAACTATACCCGGTAGGACCATTGCCCT
ATcggaaaatttggctaaaagtTCATCCACGGGGGAAGACCCCACAACTT
CAGTCCCACTTTCaatttgatttcatccctatttgaaattcaattgaaGA
AATTGTACTCCCAAAACCGTCTTCAACTTTTATCCCACCTGTGGGAAAAA
CGTTTATCGTGGCCATGAGATAGGTGTGTAcgtactttaatcgtagaaat
tttagcgagactaattttagcgttttagcgagttttccctattttcgcta
aaataaatctcgctaaaacacgccgaatcgaaaGATTGcttgctaaaatt
tatccgctcgaaatttctggttatattgccttgatacatttttatcaata
tgaAGGATTTCAGtacaaagaaatgctagaaaacgaattcagtcaataat
gtaatacaagtcttcgctaaaatttatccatgcgaaattatttgaaaccg
tgattcgctaaaatattgctacgattaaagtattccAAAGACAAACGTTT
TATAAATTCATTGTATGTAGAGGCTTTTTCTTCCATGTCCTAATGATGTT
TTAGAGAATTCCAGCTTGCGCCAGATTTTTTCACTGGTGATCCTCTCcaa
atgtttatgtttatttcTGTCTTGCCTATTATTTTGAATCTTTATCTTTG
TTCACAGATCTACAAATTGAAAGATGGAGGACATCATTTGGCTGCTCACG
AACAAAAGAATACTCCACTCGGAGGAGGAGTTGTCGATATTCCAAATTAT
CATCATGTTCATGCTGGAAGCATCTTCTCGAAAGATCCCGAAGAAACACG
AGACCACATGTGTTTGGTCGAAACTGTTAGAGCTGTAAATCTTGAAACAT
ACAACTAaagtattttattatttattatgctaatataagatttattttgt
ttcctacaaatcttttttatctaaaaaggtATAGTATTTGTAATTTTCGg
tctttgatttttaaagaaagaaactgaataaaagataatcttttttacat
ttttaccaTGTGCTTTGGTTAATCTGAATCGCAGCAACTACCtggatata
cttcctatataggATCCGATCTACCAAGTATTAAGCAGCCTCTACAGTAT
AGCCTATTTTTTGGTCTGAATTGTCaagtattgaaattttcaatgtCAAG
AGATTTAATTCCTACGTAGTGTGGACACCTAAAGAGCTGCTGAAGTCTTT
CTTTTTCACTTTGGAACAAGGCCGCAATTATCTTGTTATTCTTAAATGTC
TTATAACACAGTGTACGtttctttttaagaacaaacaatacaagaactta
agggctctgaccatagtcggaaaattgattttagtatttgaacataaaag
ttatgttttaggttctttaacacatTCAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018822TCONS_00018822Clytia hemisphaericatranscript
TCONS_00018823TCONS_00018823Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018823-proteinTCONS_00018823-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000309supercontigsc0000309:235535..239614 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.43	0.36	1.07	0.73	6727.16	5554.55	4707.58	4151.54	696.92	1697.8	404.27	229.79	1.01	1.06	0.46	0.82	18.85	28.24	1.93	0.77	15.54	13.85	1.26	2.03	0.22	0.59	50.1	15.87	1.9	1.88