XLOC_010511 (gene) - C. hemisphaerica

Overview
NameXLOC_010511
Unique NameXLOC_010511
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000306:100868..110502+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010511 ID=XLOC_010511|Name=XLOC_010511|organism=Clytia hemisphaerica|type=gene|length=9635bp|location=Sequence derived from alignment at sc0000306:100868..110502+ (Clytia hemisphaerica)
ttaaagaaaaaaataataagataataataaaataatactGCAAAAATGGC ATCGAACGAGGATTTTGAAGAAATGGCACCCTCCATCCAACATTTATTGG ATCAAAAAGAATTACGCTGGGTGTTTGTTGGTGGTAAAGGGGGCGTTGGT AAGACAACTTGCAGGTATGGCGAGAAATATTTAGAAAGATGTTGAATGAG ATTGTTATTGCATTGTCTATTATTCTTTACATGGGACTAAGATGTTTTGT ATtagtctttaaaaattcttccGGCCTTACCCAGTTTGTAAGTTCAattt tgattgatatttttgtCATGAAATAGTTTTGAGGGTTTTGTTTGTTAAAG AccttttgaaataatttcttaCCTTCAAGACTGTTCATTGAAATATAAGA TAAAAACACTCTgtatttttcctcaaaaattgacttcattTGACGTANNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNtatctactttctaaatatcaaaactccaagcactttgggacatttgtt cggcctcaagacgtcgggaaacgtctgaactttttcgtgggtcacccggt atattaTGTAGAAATTAATTATAGGAATTAGGGTATATTATGAACAATTT TTGTAGGGCTTTTCGTGTATTAACCTAATTTAATTAgggattttttcttt cagtatGTTCCTGGATCGCATTAGCATTTTTCATTCATAGAAtggttttt tttatgtttttaattttttttatgtttccacttcattattttcgaattaA TTTATATCAAGTTTATTTTTTAGCAGGGATGAAAATAAATACAAGTAATT GAATTTGTGTATTATATTTATACCTTGTCTAGTGGCTGGGTTGAAATTAC AATATACTACTTTATGAAAAGGTCtcacatttcaaaatattttcttaaaa ttctttgtgtttttaagAAGATATTTGAAATTGAATTCGCTCTACTTTCC ATTGattactttttgactttttggttCATATTATTTTGAGGGGTGAATCA GTTTTCTCTTTGGCTGGATATTTGCTAGAGATCAAGAGTATTTCATTTTC ACAACTTTTCTCTCTCCTGCAGTCACCTAAGTTAGCAGTCCCCTTTTTTG gtataagaaacaaaaattttctctatttatttttacagaaaaaaataata agataataataaaataatactGCAAAAATGGCATCGAACGAGGATTTTGA AGAAATGGCACCCTCCATCCAACATTTATTGGATCAAAAAGAATTACGCT GGGTGTTTGTTGGTGGTAAAGGGGGCGTTGGTAAGACAACTTGCAGGTAT GGCGAGAAATATTTAGAAAGACGTTGCCTGAGATTGTTATCTTTGTCTAT TATTCTTTACATAGGACTAAGATGTTTTGTNGGCGAGAAATATTTAGAAA GATGTTGAATGAGATTGTTATTGCATTGTCTATTATTCTTTACATGGGAC TAAGATGTTTTGTATtagtctttaaaaattcttccGGCCTTTGGTTTCTA AACCGAAGTTTGTAAGTTCAattttgattgatatttttgtcatgaaatag tttttgtttcttaaagaccttttgaaataatttcttaCCACAAGACTGTT CATTGAAATATAAGATAAAAACACTCTgtatttttcctcaaaaattgact tcattTGACATACCCCCTCCAttacatttttaaacaaaataagaaaaaca aatttttctcccttccaCACCGGACGAGCAcaaattttgagcaattctat CATTTATAttatgctttgtcagcataataGACACGCCTCTattctatatc ataaaaaaatatatctttaaAGTGTTCCTTTTCTTTACAATTGCAGTTGT AGTGTTGCAATCCAGCTTGCTAAGCACAAGAAAAATGTTCTCATCATTTC TACTGATCCTGCACATAACATTTCCGATGCTTTCGACCAAAAGTTTGGTA GAAAACCAACTGCTGTTAAAGGATTTACAAACCTATTCGCGATGGTTAGT TTTATTGAGATATTCTATGTGAATTTTTGATCTCATAATGTATTGGATAA TAAGATCAgtgccattgagtttcaagcccgaagggctagaggcgagacta tTGGATGGGAAATGCCCATCCTACGCCCGCgtgtagtttttacacaaacg ccggattgaaactaaaatctatcgcttgatttcaaaaaatgtagtcttcc aaaacaaaggaatcggTAGATACAATCCGTCATCATGATTACGGTGTGTT CTATGTgcattttggatgggaaataagtggcttcaatttctcttgcctga gtaGGGTTAAAGTTTAcgtctctagcccttcggacttgaAACTCAACGAT CAGTGCTCACAAAATCCAGGCTAATTTGTTGTGTTGGAGTCTATTTTCTG TTTGGGATGAAAAGCTTTAGCTTTGCCTACTGATAAGATATAAACAGTGT TGTAATAAATTGGTTATCTAAATTGGTATTATAGTCATTTTCTCactttt tcttaggaaattgatCCAAATCTTGGGTTAACAAAACTTCCAGAAGATGT TCTCGAGGACCAGGGTAGAGAATCGATCTATTTTTATTGGGTTATCGTGA TTTCTAATTAAGTTTCTATGAATAAGGGTCATTCTGCTGGACTAATTATC GAggttgttcttttttttgttaatttttggacctaccccggtggggtgaa ggtcctataaattcacctctgtccgttcgtccgtctgtccgttcgttacc agcttttctcgagattgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgattg aatcataggaatcatttgatttttggtacaaaggtgcaaaacagtggtgg ccaaaatgtgacggagcccgattttcgaaaaaaaatgtttttgggcaaat ttgggccaaaaaacggctaaaaagcgggttttttggactttgtgaaacat tggatcattgattttttctgattttttgcagggaagtagggtaccatcat aggtataagatggctcagggagatttttgcaaaaagatttgttggctcaa aaaaacgcatgtttatctataagaatcactattaataagcatacatcaat gttcttagtcaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAG ctgtcaaaacaaatgtcagcCACATTTATCACCTGAagtgtaaaaaaatt gaaaaattgtcaattttcaaatgtcacactatttttgaccatgatcatat gtgttaaatgcataaccaggtaggtccataaaagtatcacttgtttttta ttgtttgataGAAGAAGAGGTTAGTTCAGGTTTGCCCTTCCTGTTCTATT TATGAATTAAATTGGGCAGTCTAAAGTCATTGTATCGTCCTCTTTTGact tatttcaattttatttcaagcaaaaacttttccaATTGGATGCCCAATTT TTGCCTACTGACAATTAGAATAGGTAGGAAAGTTGTCCGTCTATAAGCTA AAAGTTAGATTCACtttgaaatagattttcgaTCTCATAATCTTTTTGTG CTGTTTTACAGACTTCATGTCAATGGGAGGAAAGATGTTTCAAGACTTGT TGGGGGCTTTCCCTGGAATCGACGAAGCAATGAGTTTTGCTGAAGTCATG AAGTGAGTATCCCATTTATTATACCCTTTGTACAGTGTATtaactccata actcgaacacgtacAGAGAACACAcatttgttcgatttaaggaaATAAat agtaaggtttataaggcattgtttaCTTGTTCGATTTATAGAGGTTCAAA TAATTTAGCGACATTAACCATCNGTCATGAAGTGAGTATTGCTTCCCATT TATTATACCCTTTGTACAGTGtattctccataactcgaacacgtgCAGAG AACACAcatttgttcgatttaaggaaATAAatagtaaggtttataaggca ttgttgacttgttcgagttatagaggttcaaatAATTTAGAGACAATAAT CATAAAGAATGGTTCACTGTAAAAGTATTATCATTTCAAccaattatttt tacataacTCTCTACCAGACTGGTTCGCAGCATGGATTTCTCTGTCGTCG TATTCGATACAGCTCCAACAGGGCACACGCTTCGCTTAATATCCTTTCCC AGCGTCATGGAGAAATCTTTGGAGAAATTACTGGCACTAAAATCACGTAT ACAACCTATGATTCAACAGGTTAGTGTAACATGGTGTTAAGAACTTTGTT CATAGTGTGCAAAGTAGAGTACTTTTACGCAtacaaactttcgcgggcaA AAACTTTCGCGGTTTCCacaaattttggcccttttcgccaATTCTTGGAA GGGCCATTGGCGAAAGTTTTTGCTTGCGAAAATgttttgacaaaatagaa aatatttgtaaaactttaaactttgaaTCAAAtgtattttgttacttttt ggcCTAttataagactaataagtcaaaagaCAAAAGTTTCCAGCTTAGGA TGCCTTTGTTTAGGATGAAAATTTTACTTATTGAtacgcgaaagtttatg cttgagaagaatatttttttgtcaaattcggGATAGTAAAAAAATGTCGT AAACTTCGCGATTTTCAACCTCGCTAAAGTTTCTGAtcgtgaaagtttgt acaccAAAGTAGGGGTCAAGGTCCCtcaaaaaaacatttccagCACATGT TAAAAACCCGAATCAATCAAGCATGTTCTCAAGGCCCTCAATGCTGTTAT TTTATCTCGAGAAGTgtgtattttcttattttccctaTCTTTATCGTGAT ACAGACTTTTTGATATCTGCTATAGTAAAGTCCATCCGAATTAATTTAAT TCTCTTTCTTGCTATCATGTGGAGACCACTCTCAACGTAATAATTTCTCT GACATGGTTTCCACAAAGAAGTAATGAACAGTACGCACATAtaaagcgaa tggactttagAGTAGTAAAATAGATCTTGATCAAGCTGGCTGACGGACAA ACCTACCTTAACTGGATTAAATTTtgtgtggattaattttggcgattttC GCCGCGaaatttgaccattttcttgaaaattttagtcctcggaaaaaaat taaaacctaaATTTTGTCAAAGCCTCCAGGAAAATGAACGAAATTGGTTG AAAAAGAGGCCGATTCGCGAAATTCTGTCCATGCGAAAATTAATTCACTT AAGGTACTTTTTAATCCATCATTTTGTTctcattctttttctttctacAG TTCAGCACACTCCTTGGGATGCAAGATATGAACATGGAACAATTCACATC GAGACTGGATGAAACGCTACCAGTTATTAAAGAAGTATCGGCCCAATTCC AAAACCCTGTAAGACTCGAAAAATCATAGACacctagctggcacacaacg ttgtttcatctttatctaacgttcacaacgtccttacaacgttaaatgaa cgttgaaacaacgttgtgtgccagctgggcatgTATTTTAATcggattta ttttcaaaagactTCATTTTGCTTATTTGctaatttttgcctttttgcaA TTATAAGTTTTTGCTATTTGTGGCAAAATTTTGTCGCTTTCAGGATTATT GTTAACAGATTTTTGGCTGATTCTCAAAATTAAATCAATAGTAATTTTGC TTGAAGCTTGTATCACACCTGTTCACTTATTTGGTTTTATTCGATCGTCT TATCTGTAGTATGGGAGTTTTGAGCCCATTGGAAAGATTGATACAACAGT TCATTACAAGCACAAAGAAATCACCCTACACAAATTCGAAAAAGAGATGG ttggtttttgaaaagttttggtGTTTTAGATTAGTTCTTATTTGATAGGA TTCTTCACTATGCAATAtcctttttcaatattttcaggaCCACACTACAT TTGTCTGTGTTTGCATCTCAGAATTCCTTTCACTCTACGAAACAGAACAT CTTGTACAAGAACTCACCAAAATGAATATGGATATTCGAACTATAATTGT AAATCAACTGGtctttcctaagaaattgcaaggaggtatttttgaatttg ttttgattataaaGTACTGGCTAAAATAGTAGCGatgtatttgtattttt gacgacggtgGAGTGACAGAagcgattttggaaaaacccgcagttttgac ccacaaaattgaggacggtaaaagtgctgttTTACCGTCGTACTCAGTTG GCCAGGatctagaaaatttagaaacttACTGTCTCCACCACAGGAAACAC ATATACATAAACTCACTATAGTGTTAAGTTAATACTCAGAACGATATTCA TTGGAAATGctgaaaacaagaaaattaaaCATTCGGCTACGTTTCAACAG GTTTTCAGCCGGATCATGCTATAGACTTAagaaaatggtacttgatgcct ctctgctaaATAGGGGAATCCAGGGAATGGAATTGCGCCCTGGGTAAGCA GCTAAGAAAAAGGACGTCTTCGAGTCGCCCCAGGCTAGACTGCGGTCGCA AATTTTCTTACTACATCAAGCTCTAGCGACTCTACCCAGTGCCAGGGTCA TACAGTCAGAAACATGGCGTTCTAATTCTACAGGCCTATCAAGCGGGCAG ACACTTCGGTTTTGTGGGGGCTTAATTTTTCGAAGTCGTTACATTGATGC TTGTACAAAATGTACTATTGAGCGAGAATTGCTAGGTCTGGAACGCCATG GTCATAGAGGATTGATGCNGCTTGTACAAGATGTACTATTGAGCGAGAAT TGCTAGACCTGGAACGCCATGGTCATAGAGGATTGATGTTCGTATTCAaa ctttatcatttttaatcttttagGTTCGGCATGCGATTTATGTTCAGCAA GGTCAAATATACAAAAGAAGTACTTAGAAGAAGTAAGACTTATCTTTAAC AACTCTGGCGATTTTTCACTGACTCAAACCCTTTTTATTTTTGGCCTGTG ATTGggctttttctgaaatttcccGTACCCCCTCCCCTTTTGAGCATATC CATTTTTCGAGTTCCACAGCCCCCATGTCTGGCTTTAGAGACCCCTGGTG TCCAAGTCGACAGAAGGGTGGAGGATATCTTTGTGGTTTGTCTGTACTCC CTGAATATACAGGCATTTCGTCctgtaccccctggatatcctctctctCT CTTATAAGGTCCCATCCCTTAGATATCCAGATAGCATTGAACCAGTTGAT GTCCGttaccaaaaatggcccacttagaactctctcattcgttgcccgac ttcaattaagcaagccaggctTCCGACATTTTCAATAGGGTAAGACACGG ACTATTTCTTGAAAAGCCTATTTCCTGGATTCACTTATACTATGGATTTT CTTTCCAATAGTTTCCTGCGAGGAGCCGTTTTTACCTTAGCTTTCAccaa gaaaattacaaaaaaaacagccaCTCTCTTTCCAACGCGTTTAGCCTTCA AGAATTTTTGGAATACTTCTAGCCCTTCTCTCACCAAatttattggcttg tttttNTTTTTGGCCTGTGATTGGGCTTTTCCCGTACCGCCCCCCTCACC AAATTTATTGGCTTGTTTTCATTAGATAGCAGATTTATATGAAGACTTCC ACGTGATCAAGTTACCGCTTCTACCGAAAGAAGTTCGTGGACCACAGCAA ATTGAAACCTTCTCTGATTGGCTAATCAACCCTTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018770TCONS_00018770Clytia hemisphaericatranscript
TCONS_00018771TCONS_00018771Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018771-proteinTCONS_00018771-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000306supercontigsc0000306:100868..110502 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ASNA1ATPase ASNA1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
54.11 50.04 32.59 25.83 14.61 13.45 17.81 21.9 25.87 23.56 20.38 16.33 19.74 16.35 13.83 14.62 20.81 20.95 7.97 13.12 14.35 13.08 37.6 33.07 13.28 21.21 14.64 12.16 24.32 22.68