XLOC_010452 (gene) - C. hemisphaerica

Overview
NameXLOC_010452
Unique NameXLOC_010452
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000304:214134..220541-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010452 ID=XLOC_010452|Name=XLOC_010452|organism=Clytia hemisphaerica|type=gene|length=6408bp|location=Sequence derived from alignment at sc0000304:214134..220541- (Clytia hemisphaerica)
ACAAATAAAAAGTCAGCACAATCATGTATAGACTGCTGAGTAAAATCGAA TATGTTTATTAATCAAAAGGTCTTTTTTACTCATCTATGATATTATACAT TAAACACCTCTAATACGAAATCCGTTTGGTTTATCTTGCATTAGAGATGA AAAGAAGAGAAACTTGTGTTATTCATGTCAACATAGAATTGAGATAATTT GACCGTCATTCTTGCGGTTGTAATTCATAGAAACTCTCATTCGTCATTTA GACTGTCAAGATCAGTTTATACAGTAATGATCTAAGATCTAGAGAGAGGG AGATATTTGAGACATTTTATGGAGATATCCTTCTAAGTACTCAGGATGAC AAGGTATCTGGTAAGGAAGCAAATAATCGGTTTGGCTTTGGTTGTTTTTG TTTATGCTGGCTTATTGCAAGGTCAAGTTGGTAAGTTGATTTGATTTGAT TAGTTACTTATGATAAAGTCATATTTTTTCTTTATCAGCATCCGTGTTGT ATTCCCTATGATAGACCTGGAGAGTTTAATTGACGTCTTTTTCAGTTGCC AATCTTTGAGATTTTTGCCAACTGTCATACCACATACATTCTATCCACGG TGAGGAAAACGGAGTTGCCAACAAGGGTTACAGAGTGACTACTGATTCAC CAAATTGTAGAGTCATACTATATATCTTTTCCTTCCAGTGGACATCAAAA CGAAGAGCTTTGGATGTTATCTCGTCGGTGACAGTTCCACAATTACTGTC AACGGTACTGGATACCTCTTCATGCAAGATGGTATCAGTGTGCTCACTAT ACAACATACCTCCCCTGATACACCGCCTCTCATTGAGATCACGACAATCG GACCTGCATCGTTTCACGACGACAGCGTTTTATCACAACTGAACTCAACC CTGACATCAAGGTTACTGTTTTATTATTCAATCTTCTAGCCGACTTAGAG CACCAAGGAAACCAAGAACCTTAAATATCAATGAAGGAAGACATTGAATT TTTTGGGCTGAATCTTTAATTATCCCCCCTCAGCCCCTTGAAATTGTGAC TCAAAATTTGAAGCCCCACCCATTAATAGCAAAGGATTTCCATTCCCACT GGTACTTAACATCATAAATTTTCCCCCAGTTGGAAAAAAGTCATTTCAAA AACACTTAGACAGGGGCGCTACAGTTAAAAAGTCTGATAAAACGTAAATA CTCCACGCAAGCTTACCTCAATACATCATTTCTTCCAATAGGCTGACAAA GGAAGGGACAGTGCTGGTGATTGCCTTACAATCAACTTGTTTCGATGAAT ATGCTGGCTGGTTGAAACTGGTTCAATCTGTCCCTAATCTTGATATCGGG AAAAATGATTGGGACGACGACATATCAGCAGGTTGGTTAGATTCCTAATG ATTGGTCAATTTTGGTGCTGTATTCATGCTAGCTACCTTGTTCTCTCCTA AAGTCAGGAACATCCCTGTTTCACTAGCTGGAGGATTTGATTAATTTAGT GAAATGGTCTGCATGAAAGTTCATTCCAAACAAAAGTTTTCTAGCATGGC CTTGTTGGGAGTTTTTTTAAACACTGACTATTATAAGGTATATTGCACTT TAATCATCGTTACACTTTATATACCCACATCACCTTAGGTGTTATCATTG GTTGTTATAAGAAATGTCCGGANGAGTTTAATTGACGTCTTTTTCAGTTG CCAATCTTTGAGATTTTTGCCAACTGTCATACCACATACATTCTATCCAC GGTGAGGAAAACGGAGTTGCCAGCAAGGGTTACAGAGTGACTACTGATTC ACCAAATTTGTAGAGTCATATACTATATATCTTTTCCTTCCAGTGGACAT CAAAACGAAGAGTTTTGGATGTTATCTCGTCGGTGACAGTTCCACAATTA CTGTCAACGGTACTGGATACCTCTTCATGCAAGATGGTATCAGTGTGCTC ACTATACAACATACCTCCCCTGATACACCGCCTCTCATTGAGATCACGAC AATCGGACCTGCATCGTTTCACGACGACAGCGTTTTATCACAACTGAACT CAACCCTGACATCAAGGTTACTGTTTTATTATTCAATCTTCTAGCCGACT TAGAGCACCAAGGAAACCAAGAACCTTAAATATCAATGAAGGAAGACATT GAATTTTTTGGGCTGAATCTTTAATTATCCCCCCTCAGCCCCTTGAAATT GTGACTCAAAATTTGAAGCCCCACCCATTAATAGCAAAGGATTTCCATTC CCACTGGTACTTAACATCATAAATTTTCCCCCAGTTGGAAAAAAGTCATT TCAAAAACACTTAGACAGGGGCGCTACAGTTAAAAAGTCTGATAAAACGT AAATACTCCACGCAAGCTTACCTCAATACATCATTTCTTCCAATAGGCTG ACAAAGGAAGGGACAGTGCTGGTGATTGCCTTACAATCAACTTGTTTCGA TGAATATGCTGGCTGGTTGAAACTGGTTCAATCTGTCCCTAATCTTGATA TCGGGAAAAATGATTGGGACGATGACATATCAGCAGGTTGGTTAGATTCC TAATGATTGGTCAATTTTGGTGTTGTATTCATGCTAGCTACCTTGTTCTC TCCTCTAAAGTCAGGAACATCCCTGTTTCACTAGCTGGAGGATTTGATTA ATTTAGTGAAATGGTCTGCATGAAAGTTCATTCCAAACAAGAGTTTTCTA GCATGGCCTTGTTGGGAGTTTTTTTTAAAACTGACTTTTATAAGGTATAT TGCACTTTAACCATCGTTACACTTTATATACCCACATCACCTTAGGTGTT ATCATTGGTTGTTATAAGAAATGTCCGGTAAAAGTGTCCGGAGAAACGAT CCCTGTGACGGAGCTGGGTGATGATGACACAGAGGTTGATATCGATGTTG TTCTCGACCTTAATCGTAAGTTCTTTGCTTTTGGTTATAATTTTCAACCT TTCTACAGGACAAATACATTAACTTGCAAGCGGCATAGACCTATTTAGGA GTCTCGTTACCCTTTAGAATGAAAAGGTATATCTGGCATTTTGTTGTCGA TATTACTTGGCTAACTCGTGATCTATAGAGCTATAGAACTTTGTGTTTTC AACGTTTTCAATGTCGTAATTCAATAAAGGAAAAAAGTTAGAAAATTAGT CATTTGGGAAAAGTGCTTTAATTGGTGCTAGACACTTTTGATCAATTGAA TCATTTAGAAATTGTGCTGACAGAATGAAATACGACTAATACCTTAATTG ATTGTTCATCATTGAATTCTCAATTTTTGAAAGTGAAAGTGAAACTTACT TATGAAATATTGACTTAACCAGAACAATAACTGTCAAAATTACAATTGAT CAGTAATGCGTATGATTACTACTTTGCATAATATAGCAAGGGGGTAATAT GAAATAACCGTTCTATTTCTATGAACATCGTAAGAATTCAGATTATCAAG GAGCACTTCATCGCCTAAGATATTCAAGAGCGCAACAAGTTCTAATCCAG ATCTCCAAAAATAAATAGATGCAAACTACCATACTGCAATCGTATGTAAA AAAAATAAGTTTCATCCTTCTATTAAAACAGAGAATAAAGTAGGCTATGG TAATGAGATCAAAATACTGAAACCTACCATTCTCGATTACAGATCTGGTC GAGCCAGCGTTACCATCGCACAAGAAGAAATCATCGCCCAAACTTATTCT CTACATCATTCCCGTCATTTTCATCTTCCTTTTCATTGTCGTTTTCCTCC TCTACTTCTGTTGCTATAAGAAACGACGACGACGCCGATTGACTAAACGT CGAGAAGCAGAGGATTATGGGGGCGAATCGACCAATCAACAGCAAGAACT GAACCAATGTCTCCTCAATGAACTTCAAGAAGAACAAGTAACCATGGAAG ATAAACTAGTACCCAAGCTGCAAAAGCTTTTACATAAAGATGGGGATGGG AAACAAAATGAGTACACTCATCATCCAAACACCAAACGAGAAGATGAAAA TCATTTATATGAACCAGTCACCGAAGACCAAAGCTCAAAACCTCTCTTAA ATGCACCACAACAGAAACCTGAAGCAGAAGTCATTTACAAAACTCCTTCA GGGGCGTCCAATCGTAGCGGTTTCATTCGTCTACCAACTCAAAACCAGCC TCCTAAACGATACCAAGATTTGCATACCAGAGAAATCCATGACAGCCCTG GAGATTCTAACAACACAACTGATGATAATTATGAGAACTATGAACCACCT AAAGATTCTCCAATATACAAAGTTCCTCAAACAGCTATCTACAAAACCCC ATCAGTCACCACAAGCAACGAGGACAATACACCAATCTATAAATCACCAT CAGTGACCACAAGCAACGAGGACAATACACCAATCTATAAATCACCACCA GTCACCACAAGCAACGAGGACAATACACCAATCTATAAATCACCATCCAC AGGACATTACCAAGCACCTACCAAACATTCAGAACCAAACAACAATGCAC CAAAGACATTACCATCAAACATGAAATTACAAGCATCACCACCAACAACG AACATTGAAAAACAATCACCGGGAACCTCACGAAAGATGTTCCAACAGTG TGGTGACACAGAACCACAAAATGATGACGGTTTCGCTTCTTATATACAAC TTAATGACGAAGAGAACACGATATATAAAACACCATCAAATGCAAAGAAA CACGAGCCTCCTTCTGGCAACCCTGGTGCACCTGCCAGAGATGATGGTGA TGATGAAACTGATGACCATGATTATGAACCTCCTGTTGATCGGTCCAACC AGATCTATCAGAATGTCAATATTAAGTGATTCCGATTTCATATACTTGGC ATTTTTGGCCATTTACTATCGATCATACCAAATACACTAGAATGTAAATA TTGATTAACTTAAACTTTTTGGTACATTAGCTCAAAGCAAAGCCAATAAC ACCATTAACGTCCTCGAGGAATTCAATATCAATGATATTTTATAATGCTG GAAAGCATGAAAATAATTGTTTTATCAATCTAATAAATGCAATATTCAAA AATTCAGGTCTCAGAATATATTTACCAGGCNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCAA CAGAAGGCGAGTTAGTTGCCGCGCGAGTTACGTCACGCACTCCACCTCAG CGCACAACGAACGGTGTTTCAGTAATTATCAATAATTATAAGAATGTCTT ATGTGCTTAACTTCAGTAAACGNAAACCAGCCTCCTAAACGATACCAAGA TTTGCATACCAGAGAAATCCATGACAGCCCTGGAGATTCTAACAACACAA CTGATGATAATTATGAGAACTATGAACCACCTAAAGATTCTCCAATATAC AAAGTTCCTCAAACAGCTATCTACAAAACCCCATCAGTCACCACAAGCAA CGAGGACAATACACCAATCTATAAATCACCATCAGTGACCACAAGCAACG AGGACAATACACCAATCTATAAATCACCACCAGTCACCACAAGCAACGAG GACAATACACCAATCTATAAATCACCATCCACAGGACATTACCAAGCACC TACCAAACATTCAGAACCAAACAACAATGCACCAAAGACATTACCATCAA ACATGAAATTACAAGCATCACCACCAACAACGAACATTGAAAAACAATCA CCGGGAACCTCACGAAAGATGTTCCAACAGTGTGGTGACACAGAACCACA AAATGATGACGGTTTCGCTTCTTATATACAACTTAATGACGAAGAGAACA CGATATATAAAACACCATCAAATGCAAAGAAACACGAGCCTCCTTCTGGC AACCCTGGTGCACCTGCCAGAGATGATGGTGATGATGAAACTGATGACCA TGATTATGAACCTCCTGTTGATCGGTCCAACCAGATCTATCAGAATGTCA ATATTAAGTGATTCCGATTTCATATACTTGGCATTTTTGGCCATTTACTA TCGATCATACCAAATACACTAGAATGTAAATATTGATTAACTTAAACTTT TTGGTACATTAGCTCAAAGCAAAGCCAATAACACCATTAACGTCCTCGAG GAATTCAATATCAATGATATTTTGTAATGCTGGAAAGCATGAAAATAATT GTTTTATCAATCTAATAAATGCAATATTCAAAAATTCAGGTCTCAGAATA TATTTAACAGGCTTTTGAGTCAAACCCAAGCTAAGAATGACTTTAACTCG ATAATTTTGGAACAATAAATTATTAGTATCGTTACACCTTCCCCAATGAA CCCTCTTTGTAATTATAGTACAGTAATTAGGAATATTATAATTGTACATT TATGATGAAATAGAATTTGAAACGCCAAAATCTATATTATAATACGCTTA AATCGGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018691TCONS_00018691Clytia hemisphaericatranscript
TCONS_00018690TCONS_00018690Clytia hemisphaericatranscript
TCONS_00018689TCONS_00018689Clytia hemisphaericatranscript
TCONS_00018688TCONS_00018688Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018690-proteinTCONS_00018690-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000304supercontigsc0000304:214134..220541 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.23 1.55 0.57 0.34 4.17 3.93 9.85 11.23 4.41 6.4 2.8 3.03 12.07 11.39 1.91 4.14 8.73 9.45 14.55 22.28 11.87 11.68 6.84 8.91 16.8 16.59 45.53 38.46 6.43 5.08