XLOC_010302 (gene) - C. hemisphaerica

Overview


Name	XLOC_010302
Unique Name	XLOC_010302
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000297:166447..172421+

gene from alignment at sc0000297:166447..172421+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_010302 ID=XLOC_010302|Name=XLOC_010302|organism=Clytia hemisphaerica|type=gene|length=5975bp|location=Sequence derived from alignment at sc0000297:166447..172421+ (Clytia hemisphaerica)
aGGCCTTCTTTTCCCgattttctaaatattttgttCCGATTTTGAATTCG
ACCAATCAGATTTGAGTATTCCATTCCCAAATATCCCCGATATTTTGTAA
GGACTTGGCGCTAGTTTACACATCCTCGCAATTTTTGTCTTTCGTATCGC
CcctcaaaaaatggcgactgACAGACTAGGAAACTACATAGATCCCAGAA
TGTATTCCACTGGGATAACAGGAGATTTACTCTTCAGAGGTCCAGGTTTA
TTCCAAAATGTCCAGTTCATTCCAGAGCGCATCACGCAGTTTTCAATCTC
AccggtaatttttttcatttctcggAAATTTAATAACAACCATAAGGTAC
ATTTTACACTAGGTccttgtttaaatttttactgaaatgtaaacaaaatg
atTGACAAAAAGCTGTTGCATCCTAAAGTCATGAGAATCATACCATGATT
GATACTGCCTACATCTTATATCAGGAAATGTACCATGTAAAGTAGGTTTC
TTTcatcattttaaagcttttccaTAGATTTTTGGATTAAAAATTTGTCC
TTTTAATATCTGGATAGCAAAAGGTTGGTGCTGGTGGATTCGGTTAGTCC
CATTCCCAAAATACCTAGGCGCTCTAGGCTAAAAAGGTAATTCCTGATAT
GGCCCTCCCCCAACTTAGGACTACCAGTCCTTCTAATCTAATAACATGGN
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NNNaagatcagttcattatgagtgcacacagCTACCTTtgtatcaactac
aaatattcgtgacatcctataacgatcattacttatgttcaaactgcgtC
CGATTAACGAAgaacctaagaaataaagtggggaaaaacactcaacatat
gatgcaaagtgaacttaaaaagaaagacgacgtcatacaaaaacttTTTC
GTAGGACAATTGAATGGTCTACTTtgtcaaaagcctttgaaaaatctagg
tACACAACATCCGCATTAGCATCTTTGTCCAATATATTTAGTATCAGGTC
AtagttttcggcaattattgccgtttttggaaagAGAGTTAAAATTGTTA
TTGAGCACATAGTatcgggtgcgccacaaaaaagtttccctcttaaaaac
aaattttctcgaaatctagaaattttaaaagaaccatatATACGTACCTA
TTCCATTGGAGAGAacaaagataaacttaaattttgatgagtcattgttt
aaattcagttcattagatcaaaagttatggtcaattgaataaaataataa
ctttctgaaagtggtcaaaagtgtaaaaaatcaacctttcaaattaaaca
gaagcatataATTGCATGATGCATctttattttcgtttcagtcattaaaa
attataattagctgtctaaatgacctctTGTCATATAAAAGAAGgatgaa
tttcaataaaaggaagaaaatttgttgaaaaaagccaaaaaaaaatttta
attgactttaaggttgttttttaaaattgaggATTGTGATCAATTCCGGC
TgtggaattttctaaaaatcaccaTGGAAATCCAgttttttgtgctcttt
ccaaTGGTATAGACGAGAGAGTGCCCTTTTTCCTAGTTTGGGAAATATTC
CCACTACTTCCTAAATAGGAAGTatcaaacaatagaaattttgaATTCTT
ACTTGAACAAGGTATACGccttgtttaaggtattacTCCTGACTGGTTTT
GGGAGCGGTaaggattttcagattttttgaaaaggtgggggttgggttAG
TGAGAAATTTCAGGAGAGATGTTTCCCAGTATGACAGTTATTGCATTATA
AAAAATGGCAGATTGACTAGGAAAAGGTCTGTAACACAAATTATGCATAA
TGAGCCTTAATGTTTTTTATGCTAAAgtatttaattattcaacaatgTAA
GTTGGTCTAACCTTTTgatttcatatttatttttcaaaatatatataaca
ctcaATCAATGACTCTGACCTTCATTATTCCATCAAAATTTGTGTTGTTG
AAGAGTGTTGATAACATCAGAtattttttgtccttttgtATCGGTGTGGC
AACTTTTCTTTCTCCAGTTGAGATAAAAACACACTTTTTCGTCTTAGCAG
TAAGagggtttttttttcagttaaataaccTAGATTTTTGTCAATATTCA
CAAAACCTGTGGTATCAGTGTATTTTTTCAGCCGAATAGAAATTGGAATG
ATATAGGGTGTAATAGGAACCTCCTTATTTAGGAGTTTATTAAATAATTG
GTCGTTGGTAATGCTATTATTTCTGACTCGCCAGGTGAAGGTGTCTAGAA
AACCAAAACCatagtttagaaaaaaagaataaattgCTAGAGTAATGCAT
tgtgaaaatcacaaaaaaaaaacgaaaaataaaacttagGCAGAATCCCT
CATTTGTTTACTCTAGGGGTCAGAAAACTAGTATCTGTAAACATTTTTCA
TGAATGTTACCCTGGGTTCTTTGTGCTGATGCAATTGAACAATCTTAAAC
CTGACTCATCTTAGAAAAATAACGTAGTGAATATTAAGTCCTCAAAATCA
TTCTTGATTAAAAACCCTTTATTATCCTTTATTGGTTTTCATAAAATTAT
AGTAAAAGTTTGACaagcttgaaaaatattttgtattttatattttcagg
aTGGGATTCGTTATTACAAAGTAGCATGGCAAGAAGCATGGTTACCTGAA
CACCAGCTTATCCAACACCAAACACTGATCGAAGCATACTGGCGCACACA
GAATGATCTAACAAATGCAAACAATGCAGGGGAGAGCTCACATACAATCA
CCTCAAATGCAAATAAGGTTCAGATTGCTGTTTCCANAGAGAGCTCACAG
ACAATCACCTCAAATGCAAATAAGGTTCAGATTGCTGTTTCCAACATCTC
CAAATCAACCAATGCCCCCTTCTACGGCAATCTGAACTTGACAGAACTGA
CAGCAGCTGCCACAACCAATGCCAGCAATGCAGGCGATTCACCAGAAACA
CAATCTACACCTGCTACAATCAAAATAAAGGCCAAAAATACAACATCTTC
TGCTAAAACACCGACAGGCTCTATCGTAGAAGCAACGGATGAAAGCGCAG
TAACAGCTGCAGCACACACTATATTAGCACAAGTGATGAAGGATAGTGAA
GTGGAGAAAGCAGTCGAAGGTGAGGAGGGACAAGATGAGAACACTTACAT
CGAAATCCCTTTGAATGTCGTTCTTGAAGCCACCATTGAAGCCGAAAACG
CCGCTACAAACGAAAGCACGCCCAAAGTTGAACTAAAACCACATCAGGCG
GCCTGGCGAAAGAAAGCCAACAGTTCTTCATTACAATTGGATGGTTTTGA
TTTGGTAAACATTGAAAACTCCAACGCTAGCATGGAAGAATTGGAAGCAA
ACGCACGTGAAACGTTGAGCTCGTTCCGTCGTAAAAGAGTTCGCTTCCCT
AACGGAACATCCAAACTTCCACAAGAATGTTTCTTCTGTTTGAAGAAGTT
GTCTAACCGAAAGAAGCTTCGTGAACATCAGTTCAGTGTTCATTTCAAAA
ACGTTGGTGAATTTATGTGTGgaatttgtaaacaaagatttgtgtTCGGG
CGTCAGTTGAAAGCGCACATGTTGGTTCACTCAGATAACCGCAACTATCA
ATGTCAGTATTGTGGCCTGACTTGTAAACGACGCTCACATCTTCACAAAC
ATGTTCAAACACACAACCAAGAGCGAAACTATCGTTGTGATGTGTGCCAT
ACGAACTTCAAAGTACAAGCAGAACTGAAAGATCATTGTATGTCTGATCA
CAAAAATCAGACCAATCAGTGTAACGTTTGTAAACAAACCCTACACACCC
CATTCTCTGTTTACATCCACAGCATGCGTCATTCGGGAACACGTGATCAC
ATCTGCGAAACGTGTGGCGCATCCTTCAAACGCAAACAACATCTCATCGC
CCACCGAAACACACATGCAGAACTACGCGAGAAAATAAAATGTCCGGCCT
GCGATAAGGAAGTTCCGGATCGGAAGTATCTCAGAAGACATATGGAACAG
ATGCACAAAGAATTGGCAGCAGANN

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00018373	TCONS_00018373	Clytia hemisphaerica	transcript
TCONS_00018374	TCONS_00018374	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00018373-protein	TCONS_00018373-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000297	supercontig	sc0000297:166447..172421 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
23.15	21.24	16.21	12.84	39.17	31.65	24.29	26.04	15.08	18.18	16.64	12.86	16.9	22.48	14.4	21.48	17.32	17.98	10.18	11.44	15.17	14.91	19.98	19.01	32.61	29.24	8.28	6.34	16.16	15.68

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XLOC_010302 (gene) - C. hemisphaerica