XLOC_009856 (gene) - C. hemisphaerica

Overview
NameXLOC_009856
Unique NameXLOC_009856
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000271:305253..315874-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009856 ID=XLOC_009856|Name=XLOC_009856|organism=Clytia hemisphaerica|type=gene|length=10622bp|location=Sequence derived from alignment at sc0000271:305253..315874- (Clytia hemisphaerica)
CACGTTTTCATCTTTCCAAAAGTAGTTGGTAAGTATAAATTGTATTAAAG GGGTTACACACGAAACGAAAGTCTCGTGCTCGCAAGCGAAAGGTTTTTCA AACACTATCAACCAAAGCGAAAAGCACCAATCGCAAAAATTTGGAAAAGC CACTGTATTTTTGCTTTTGGATTGCTAGATTAGCTAGTTGGCTTAGGTTA GGGGGCTTGTGGATTGTTATAGGTAAGTACGGTACCGTAGGATGGTCAGA TGGTTAAAAACTCTCTCATTGTGGAAGAAAATTTCCGATTGCCAGTTTAC AACGGAAAAAGACCAAAACTTATGAACTAACCCCAAAAAACGCTACAAAA GTAGATTTAGCTTGTTAAGGCTTAAGCATAGCTGTCAACTTCGCATCACA AAAATGCGGGAGAGCAAAAATCAAAGTCGGAAAAATTTTCCCCGATAATC CGATTTTTCAAAACCAGAAAATCGGGAAATCGGGGAAATTTTCTCGTAAA ATCCGATTTTATTGGAATTTTTTTTCGGGAAATTGGGGAATTTTTCGTTC CGATCTTTCAAAATCCAGAAATTTTGCTGCTTGGTTTTTCCAAAATCGGG AAATTTTTGGAAATGCGGGAGATGCGGGAGAAAATCCCAAAAATGCGGGA GATTTGGCAGAATTTTCTTCACGCGGGAGAAATCGTTGACATGCAGGAGT CTCCCGCTCAATGCGGGAGAGTTGACAGCTATGGCTTAAGCGGGTTAGTA AGTTGTGTGTTGTCTACTGTACTACTTACACATAACAATAATACGAACGC TCCATTATCAAAAGTTCTGAAATCCCAAAAAAGCAACCTGAAATCAGATT GCGGTTGTTTTTCTGCCCAAACAGTGTAGCTCTAAAGCTCTAAAAACGCA TCTAATAACATGAAAACCAGAATATGATTCTTCAATGGGAATCAAAACTA TAAAGTGGACTTACAAACATCAATTTGTCAGATCTAACAAAATTTATAAC GGCACTGTCATCATTGACAATAAAACAAAAAATACTCTGTCAAGAGCCTT GTAAACATTCCAACAACTTCCATCGAAATGATCTATCACAGCTCAGTCTA CCATTTTTAGCGCAGTCCGAGGATTGAACCGAGAACTCTCGCAGAGCGCC CGAGCTCCCGCGCGGCACGCACCTTGGGGATGAAAAACTTCAATCTGTCA ATCCTTTTGTCTCAAGCGAAGAGTACGCAAAGCGATTCTAGCTTTACGAT AGTGCCGCAGATCATCAATGGATAGTATTCAATTATCATTATCCCTTTAT TTTCATTCCTAGAACTTTTGCAAAAAAAAGGAAAAATAGAAAAGTTGTAT TTCCTACTGCTCAATTCACATACTGAATTTGAAAGATCTTCTATGTGGCG TTTTTTTGCAAACTTCAAAAAACTGATTTTTGTCCCGCCTTTGCGGGATT TTGGCTCAAGTGCTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACAAAGTCCAAATATGCGTT TCCCGTAATTTTTGTATGAAGAGTTAGGTCTACACTGCCAAAGGGAAGCT CTAAAAAGGGATGAGTGAAAATATATAACAATCTGATGACAGATGCAGCC AACGAGCCCATTTCTATGGTGGCCCATGAAGGCCAAATTATTTTTTTAAA TTGAAATGATTATTTATTTCCTAAACTAACGAAAAAAGTCAAAACATATC CATTTTGATTTTCATTTTCAAAGTACTGTCCATTCTGGTCCATTTCGTAG CCCATAGACCCGTTTCAATGTTTTGATTTTTCGCGTTTGTATGCGCATGC GCCAAAATAGTTACGGTTTTTCAGAGGCAGAAAACACGAAGCGCTCGCTG GAAAAAGGCAGTTTTGATTTTATTATTCAAAATCTCTTCATCAGAATTTC ATGAAATTTTAGAATAAGAATCCTATATATAGTTATTAGATAACATACTA AAATTTCTATTCAAAATTCCTTCTAGATCCTGAGAAAATTGACATAGTGT GCCTCCAGCTAATGTTGTTGTCTTTTTTGCCTCTGAAAGTAGGGCCGTTT TGCGGGTCGTAACGAGCCGATGTAAACATGTGACGTCACATGAAACGGGC CTATAGATAGGGTGCGCACTCGTCGGGATTTTTTGCATGGAACGAGGAAG AATTTACAAAATTGCATTAGTACTTATCTTTAAATTATCCAAATCTGTTC ATTCTTTTTGCTCCGGCCTAGGAGCCTTTAATTCTCTCTTCCGACGGTCA AGACATTTTTTGTTTGTTTATCTAATCCGATAATCTATTCTGATTTAATA AAAACGGATTATCTGGATTTCGATAATATTGCGAAAGTATTTAGAAAAAG ATGGCTGCCGAAAGTGGGCTTAGCTGCAAATCTCAGTGAAAGATNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCATCATTATTCATG ATGTTTTGGACATGATTTATGAGAATTCTGATGCATACTGGTCTATAACA ATGTGGAAAGACTTTGGAGAAATTTTGGCCTTGAATTAAATCTTGAAAAA TATGGCTAACTTCTCTAGTTTTATGGACGCACAAAACAACCACAAAACCA TAACACATAAAACTCTGTGAAACTTTCAAACACACATCCATTGGAATTCG AAAGAGAATACTAAAATTACAACATTACAGTGCAAATTTGAAAACGATCT GAGCAGTTTTTGTGGTGTTATGTCATATGTGTATGGCTGAAAATGATCCT GTTTTGTAGGTATTCATCATTTTTTGACTGGGCGACCATTCCTTTTGATT TTTCAAACCCGACACAGATATTTTACAAACATATCACTATAAGAATTCAA TAAAGGATACTAAAACACAATTCCTGTGTGAATTTGAACAAGATTGGAAA AAATTTCACAGTATTATGGCTGAAAATGATCGTTTTTTAACTTTGTATGT TGTAATTTCATTGCGGCTGACGACCGTTCCTTTTGATTTTTCAAACCCGA CACAGATTTTTTATACAAACATATCACTATGAGAATTCAATAAAGGATAC TAAAACACAATTCCTGTGTAAATTTGAAAAAAATTGGAGAAATTTTCACA GTGTTATGGCTGAAAATGATCGTTTTTGGACTTTGTCGTAATTTCATCGC GGCTAGGCGACCGTTCCTTTAATTTTTCAAACCCGACACAGATTTTTTAC AAACATATCACTATGAGAATTCAGTAAAGGATACTAAAACACAATTCCTG TGTAAATTTGAACAAGATCGGAGAAATTTTCACAGTGTTATAACTGAAAA TGATATTTTTTGGATTTTGTCGTAATTTCATTGGCTGGGGCGACCGTTCC TTTTGAAGATTTTTCAAACCCAAAACAGGTTTTTTCCAAATATACCACTA TTTATTACATACACACTATTGTACCATTTTATTTGGTTTATCCTACTCTC CCCCAAGTATTATCCCAACAGAAAAAATAATGCTTAGCTAAAAGCCTGTG GCCTCTAATTTAGGCTATTTTTCTCCACGAAATTTTATCTGGACAATCAA ATCAAGAACTTGGAAATATTGACTTATAAATGTTTATCTCATTTAGCTCC AATGTTGAACTTTTTAGTCGAGAATGAGTGGGCGGGGGATGGGTTGGTTC TTTAGGCGAGAAAGTGCATGTGTAATCACTTAGAAGAGCTAAACTTCCAG CTGGTTTATTTATTCGTTAAGATTATTTCTCATACTCGCTCTGCAATAGA ATTATTACTTGGCTTTCTGATCTGTTCTGATTAGCAGTTTGTGGGCAACG TTCTAACACAACTAATTCAACAAGCTCATCTTTCACATCTTTTAATCTCT TAAGCCGGAGCTTCCAGCGCAGCTGGTTTATTTTAAATCAATCACGAATT ATCAGGGAAACAAGTAAAAAAAACTGCATCCATTATTTTCTTTCCAAAGA TATTGATGTTTTTCGACATCAAGGTGAAAACACGACTTAGGCGAGGGGAA TTTGATGTTCTGTTTACCGTCACGTTGTAAAAAATATTTGATGCAGCAAA ATTTTCATTATTCCTACCTAGTGCTTCCCATCTCCAACGAAGTTTAATTC CACAGTGAAATCGAGCTGCTTTCACTTTCGGAATCAAAATGACCATGCGC GTGAATTCAAACGCGTTCGAGACGCGTCTAAAACGCAAATTTTTAAAACG CCCTTGTAGCCGCCCACTGCTTAAAAAAATGCCTGCCCCATTCGCGGACG TGATTTGAACCATGTTTTTTACTCTAGGTGCACATTTTGTTAGCGAAGAT GTTATTTTTGATTCACTTTGAGTGTTTTGGATAGCTTGGCACAGGAAAAG AAGAAAATAATGAGTCTTTAAGAAACAATGAACTTTTTTGAGCTGCAGCT CAAGAGCATGCTGGCGGTCGACGGTAAACAGAACATCAAATCCCCCTCGC CTTAGTGCTGACCACAGCACCGGAAAATTCTCGACCCACATTGAAACAAA TGGCTGTTGCTAATGAGCTGGTTCATCTTTTCAATCGGGTTTTTTTTAGT AATCCCAGGGTAAGATTAGGCTACAATCTATCACAATACGCTTTATTTGA AAATCTACAGGCCGTCTGGAATTTTGAAAAATGGAAGAAATTGCGATTTT TTAACAAGATTGCAGATTTTTTCATTTAAACACCATACACCATCTGAAAG CTGAGGATTTCAGCTTTATATATAGTGGTGAAATTTGTTTTTAGCTATCA TTTCCAGCTCATTAGCAATAAGCTAAAGTTTACCAGACCAGATTTTCAGA CCACACCGGCAAAACTCTCCACACCCTGCCACACGGAAGACTAGATTTCA TCCGCCATTTTTGGCGCGGTTTTGATGCTTCAGAAAATTATTTCTTGCTG GCGTGGTAAGGAGGCGATTCTTTGAAAAGGTGATTTTTTTGTGTTTTGAA AATAGAATAACTTAACCAATTTTAATAAATGACCCCTCATTTTTTTCAGA AAGGTAAGGACTTTCAAATAAAAATTAGTTTGGTTTCTAAAAATTGAGGG GAAAATTTCGGTTAAGTCAAAAAAATCTACCTTGATTTCAATTTTTCAAC CGCTTTTTAAATGTTGTGTCCTTCATGGTCCATCGCGTGGTCAATTGAGG ACACTAAAATTTTGGCTGCCGTAAGATTATATTGTTTTGATTTTTATTTC CAAAATGGTACCTCTACATGCATGCTCGTATTCTCATGAAAATGAAAGAA GTCTTTGTCAGTATGTTGAGTATGTGTTGTTTTTGAACTTATGGAATCTT TTAAATGATTCGTTTTTATAATTACTATGTAGTTGTGTACTTCATTTGTG CACCCACAAACTATTTGATGAGCATTATTAATTTCAACACTGTAAAAAGA ATGAATGAGGGGTGTGCTTGGTTACAACATATTTATTTTTTGCTTCAAAC AGTTACATCAATATGTCAAAAACATTTTGTTCAACTACTTTTATAGGATG AACCATATTCATGTGGCTTTCAGCCTTGCACTCCATCGCAGAGGCTAATC AATTTTAATGACTTTTTTTACTAATGACCAAGCTTTCATAAGAAACTAAA TCAGTCATCTACAGGATGTATTTGCAACAACAAGGATGAGAGTTACCTGA ATCAAGTTCAAATTCCCCAGACAATTAATTAAAACTTGAAAACTTAAATG AGACAAAATGACCGGTTGTGAACGTCCAGCAGCCAAAATATCAACCAACC AAATTTTGTTATTCGATTCCCGAGACAGCGCTACAATTTTTAAGGCCTTG TTTATATGCTAAAGTAATTAAAAAAATTTTGCATATGTAAATGGGTCAGT GTTTGAGGTCTGGCAAAATTTTCAAGAAATAGTCTATCCGGCGGTGCGCG GATCTATGTGGGTTCTGTCTCCCCCGTAGATCTTTTTCTTGGGAAGTTGA TCTTCAAATTAGTTTTCAATGTTGCCTTGGCTCAAGTCTTTTCATCTATG GCTAAAATTTTAGGCAATTTCTCATAGTTTTTGAAAATATTAATTTCATT AAAAAGTGCCAGGTTATTTTTTCATGAATCCCTTTAGAAGTTTTGTGGCA CATTTTTTTGCTTGCAACTTAAGTAAACGATATAGCGCTTTCGCAGCAAC AATCTTTGATACGCATTTCGGCGGGACGCTAGTGTGACTAACTGTTGCAT TGGAAACAGATTGATGATTCTCGGTTCTGACTTCTGTAACTAGCTACCAT GAAGTCGGGTAACTTGCATCAGTGGAGGGAAACTTGCATAACCATCAAAT GAATGACCAATCAAAGCTTCACAATTTCAAAACAAATGAATTACGCAGCT CTGCTCACAGCTCTACTCTACCATTTTAGAATCTCATATATGCTGTGCGA GTAATTTTGATAATAAAAAATCATGGGAGATCATAAATTTAAAGATGGCT GGATTTCAGACGTTTCTCGCTGGCTTCTGGACGTGTAACCTCAAAGTTAA ACATAATTATGCATGACATCACTTTTGATTAGGAGATATACATTTTACCA CCTGCAAATTTTGTAAATCCGGTTTGTTTTGATTTAACTTTTTATTTTAA TGACTAGCCAAGTCATTCATTTGAGGGCTATGGAAGTTTCCCTCCACTGA TATGCAAGTTACCTGACTTCACGGTATTAATCCTAGAGATCCGATCTTTT GATATTTTATTTATCATTGAAGTATGACTTTTTGAAATTTAGTAGTTCCT AAAATTTCTTTTAAAGGTGTCCCGTAAATTTTGGGGTAATTACAGGACAC CCTCGGGGAAAATATGGGACAGGTATGACATGTTATTGAAAAATCCAGAT ATCATTCCAAAAGGTCGTGATATTTGAGATTTTGAATCCACTTGATGACT TAAAATCCAAGTGCTATCATTTAAAGATTTAGAGTGTAGTTATAATTCCA TCAAACTAGAAAATCAAGTTTGTAGTTTTCTTATGGTTTTTTTGACTTTG TTGAAAACTGGATTTTTCCTGATTTTTTGCATGGAAGTAGGGTACCATCA ACGGAAAAAGATGGGTGAAGCAGATTTTCTCAAAAAAACTTTTTCGCCAT AAAAATTGAATCTTTATCCATAAGAATCACTATCTATAAGCATACATTAA TGTTTTTAATTTTAGCCAAATTACTCAATTTATTCCAAATCCCTCCCTTT AAAAACCACCCCAATGTGCACGGGGGACTAAACAATAATGAAAACAAATG ACAAATTCTATTAAATTGTCACTATTTGTGTTCCGAATGATTGTTTTAAC GGTCACGCTCAAGTAGATATCAATTATATATGTGTTAAATGCATAACCAG GTAGGTCCAGGTATCACTTGTTTGTGGAACAAATGGTCGAGAGTGGAAAG CCCTAGGGCTACCAAAAATGTCTTGAATCTTTTGGGGGACTTAAAACTCA GAAGGGACCTAATTTTTGCCTGGGACCTAAACCCAGGCTGACGCTATGTC AATGCTGCACGCAAGTATTTAAGCTAAAGTCCCACTAAAGCTGGACAAAA ATCACGTTTTTTAGTGTTTGCAAAAATAATGCCACATATTGTATTTTATG ATTGACAGATTAAAGTTTTTTCACGCCCAAGGGAGTTCGCTGTTCTGAAG GAGTGGCTATTTCAACTTGAGGCCAAATTCTCTAACCATGCGAGTTGTTT TTAAAGTTTTTACAATATTAGAACTTAGATGCAGAAGATCTTACGGAACA TTTTAAATGTGGTTCAGCAGTTCAAAAGTTATAGTGTAAAAAAGTAGTGT AAAAAATCACTTTTGAAAAAGTACAAAAACACATGAAAAAAGGGAATCAT CGAAACCCCATTGAAATTAATGTTTAAGATAGATCATATTCTACAGTACT TTTTATTTAAGATATAAGTACAAAATAAGGAAATGCTAAATCTAGGCATA CTCTTCATCACCATAAATGTCTTTATGTTTGGGCAATCTTCAAAAGATGA AATTTATCTTGGTGTTGACCAATTTCAAGAATATTATGATTTGCCAGAAT TGCCATACAGTCTTGACTCTTTGGAACCATGGATAGATGCTGAGACAATG AATGTGCACTTTAAAGGACACCATGCAAGCTATATGGCTAAGATGAATGC AGCTTTGACTGAGTGGAGAAAATCTGTAAGTAATTTGTGTGACCTTTTAG TTTATATATTTATTAAGTATTATGAGAAGTGAGAATTGGGATCAGAAATC CTTATTAAATTGAGTTTCTCCTGAAAATGGTTTTTCCAGCTGACGAGCTC CCAAGCTATTTTTCCATATTTGATTTACTTTCGAATTAAAAAAAGGAATT CTTGTGAAGTAAAGTAACAAATGAATTGTTGATGTTGGTGAAAACTAGAT ATACTGTTTTCATGGTTTAAATTATGAAATTCATGCAAATAGCTTCAGCT TTCTCCCCACTTTTCTAGGAACCAGAGAATGAATTAGCAAAGAAATCATT GGTAGACATTTTGAAAGATGTGGATAGTATACCAGAAAAATGGAGGACTG CTATTCGAAACAATGGTGGCGGGTATTTAATTTTTTTTTCAGGCTCTCTT CGCATTGATAAAAAATAGGAGCAATTTGGGATAAATAGCCAAAGGTTAAT TAAAAGTTTTTCTGAAAGCTGTCTATGCAAGCTATTTTTAACTGAATGCA GTATGGAAGAAGAATCTGAATCGAATTGGTTTCCTTTTCTCCCAAAGTTG TTTAAATCTAATCTAAAGAATATTTTTTGGTCTTATTTTCTAGGTATTTA AATCACATCTTTTATTTTGCTACAATGAGTCCAAATCCAAAAGGAATGGA GCATACTATGCCATTAGGTATTTTAACAAATTTCCGCAAATCTTTTCACA ATTTCACCCACTTCCAATCATGGATGAGTAAAGAAGCAATGAATTTATTT GGATCTGGGTACGTTTGGCTTTGTCGTGAACCAAATGGTGGATTTTTTAC CATTTATGCAACAAAAGATCAAGCTAGTCCAATCACATATGGATTACAGC CTATCTTGGTCATTGACGTATGGGAACATGCTTATTATTTGAAACACAAA AATAAAAGGTAATTCTAATTTCTGGTATTGTTGATTGTTTTAAAAATTGC TGTCTTGAAATGGAAAAAAGAAAGTTCATTTTGATTTTTTATAAAGAAAT CATTATAGTGGTCTTGCTTTTTTAACATTGTGTAGTCTGGTGAGGTTATT ATGGATAAAAGTTGGGGGTGTGGATATTATTGCATGATAATGAACACGTT ATTGGTTTTTTAGGAAAAACTACATCGACAATTGGTGGAAGATTGTAGAT TTTTCAAAGGTAGAAGCACTTTTGAATTGGTGGTTGAATTTTGAGAAGAA ATCACATGATGAACTTTAGTTAGAGGACTGGTGTCAAAGTGTTATGCCGT TTCACTATTATAATAAACTAAATGAATAGCTGCAAAGAAGTTTTACCAAT TTGTACTTTATGGTTTTTAAAGATTCATATGTTTTTCACATTTCATCCAA ATCTTTAATCGGATTAACTTTCGCGATTTCGCGAATTTTTGCCATTTTCG CGAAATTGAAACTCGTGAAAACGCGTGAGATTTCTGACTCGCGAAATTAA ATCCACCACAAAACTTTTAAAATCGCATTTTCGGTGAAGAAACCAGTCCA AAGTCTCTATTTGGGGCAAAAAATGGCTATTTTTCAGCTGTTTTCAGGCC TATTCGCGAAATTAAATCCACGCGAGATTTTTCAAAACTCTGACTCGCAA AATTAAATCCAGAAGAAATTTAATCCGATTAAAGCAGTATAGTAGAAACG TTCTAATTGATCTTTAAAGTCGTCAACTTATAACTATTTATTGTCTGTTC ATGTCAAATACAAAGGTCTAAACAATATTCATAGACATGTTATAATCTTT ATTTGTATGTTTTGTCTAGTTAATTTATAATGATGGTATAACGTGATTTT AACTTTTATGATATCAAAAAAGAATTACTATTTGTAGATTCAAAGAAATA GAAGTAGAGAGAAGGAAAAACAACAATCTTTTATACTATTCATTTTGAGC CGTAGAGGGCTTGTTATAACAGCAGGTACCATAATTCAAAACGATTTGAT TGACACGCGCTTGTCTTAAAAGTAATTGTTTAAAACAACAGCCGGATCTC TTTCTTCTTTTTGAAACTTTTTATTTGTGAGTTGTTTCGATATATATCTT TTAATAAATAATTTTCATAATTAGCATAATTAAAGTTGATTTTAATATTA TGTTAACGATCTTGAACTCTCTTTCGAATAATTAAGAAAAAATAGAAGCC GAGAGACAAAATGTTTACAACCGAAACAAGACGACTTGAAGTCGAAAATT TCGCCTAGACTTTGAATTGCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017638TCONS_00017638Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017638-proteinTCONS_00017638-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000271supercontigsc0000271:305253..315874 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
25.22 22.47 15.33 14.8 22.69 15.22 29.1 26.32 27 24.06 22.18 24.25 14.53 12.16 15.23 15.42 17.24 16.86 14.4 15.65 13.75 13.85 25.73 23.06 10.77 13.26 13.94 11.91 20.15 18.7