XLOC_009839 (gene) - C. hemisphaerica

Overview
NameXLOC_009839
Unique NameXLOC_009839
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000271:118226..122668+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009839 ID=XLOC_009839|Name=XLOC_009839|organism=Clytia hemisphaerica|type=gene|length=4443bp|location=Sequence derived from alignment at sc0000271:118226..122668+ (Clytia hemisphaerica)
TTGATTTGAATGCATCAGAAGATCAAAGATGTATATGCATCAAAGGTCAT
ATTTCGAGAATGTTATTGCATGGTATTAAAAGAGGATCGGAATAAACTTG
TTCTAAGGGGCATATTGTGTATTTGTTTTGTATAGACGTCGTTGACTTTT
GATGTGTGTTGTGTGGCATTTTTAAGATCACGGATAGAAATACCATCAGC
CTCGCGCTTATCTTGCGTAAAGCGTATGGATTACAGCAATGGATTTTGAA
TTTCATGTATCGGGTCTGTTACGGAAAGATTTTCGTCTTGCTATTCAAGT
ACGTCTTTTTAAATTGTTTGCCGATTTTCTAACCCTTTAGCCCTTATTTA
CTGGCTTTACTTAGGCCTTCCCTCTGACAAGAAAATACATGTCTTGTTGT
CTACGGGGGCACCCTGGAGACTTTAAACGTGGTAGATTTGTTTAACATTG
GGATGGGCTTTTTAACAAAACCATAtttgtcgaaaatttcgccttatATT
TAAACTGTATAGGAATAAACAGGTAGTTGAGATTGAAGCTAATTTAGAAT
CTACTACTACAAAGAAAAGATTGAGAGTTTTTGGTCATAAATTAAGTACG
GGATATATTGGTTGACACAGCCAGATAGATATTTACTTTATCTCACTTTC
AAGAAATCCATAtacaaattcaataaaattttcatgGATGCGACTCGAGT
CAGGAACTCATTTACCAAGTTGCtatagattttctttcttgtaAGGTTGC
ATcaataaggaaaaaaatatccaacACTCGTGTTTACTTTGCATGATGGT
ATGTAACTATCTGTTAAGAGTAATTTATTCAGGATAGACAGTCGAACGAG
AAGTTAACTTGACTCCCGAACGGTAAGATCTCCCGATTAGGTTTTGAAAA
TATCTCGGCACCCAAAAAGGAAGATAGAGAATTCTTCCTAATTCGGAAGA
TCTGCCGGTTTAGGAAGGTTTGATTTCTTCAAAACAGAAACGGGAAGTAA
gatagaaaaatgtaaacaatgaAACAGACTGCCCGATTCAGAAGAAAATC
CttctaaaattcagaaaatcgtCGCCTCAACATGAAGCACTTCATTTGTC
GTTTTTCAATCAAACAGTTAGTATGAACAATTTCAGgtgaaaaaatgttt
taggTATTTATTCTTTCGTTACCTTTCGTCAAATTTTATCCtctgatttt
tgattttcgtagcatgggattcttataaagtagactcttataagaaaaat
gaatatactcatattgtgcaccagcccttgtttacttcgtaagAACTAAt
gaccgaaaggtatattattgATTTGGGACATAATCAGTGTGAGAaaccaa
aaaaagaaaccatgagacacgcactttttttcttgtgttggtgggatgga
gcatgttgcattgcaccaacgcgaaaaaaacttctcgtgtctcCAAGCCT
TAAgtaagatgaaattttttttttaaataaaggaaAAGATACTAAAGTCG
AACTCAGTGCGGCgtgcacgttcgactatttcaAATGTAATTGATAATTG
AACTTTTAATGACTGGTTGTCTACTCTCACTCCGTTACTCACGTAATTTT
TTAGTTTCTATTGCCAATCGATTTGGAAAAGATGATCCGCCCGATGTATC
ACATGAAGTTAAGACTAATGATCTCTTCTTTGATTGGCTTCATCTATCAG
TGATTTTTATGGTGATCCTGAATTCAAATTAGTCCAGACCAGAGCCTCCC
ATACAAATGCTTCTTAAGACCTGCCCTCCCTTTGTTGATTAGCGTCTGAT
ATGTATCAAATGGTATTAAAGTCAGAACTTATTTCAAGCGCTCAATTAGC
AGTATTTTTATCAAAGTTGTGACTTTATAAATTAGCATTTTGAGAGAGGT
ACTAGTTTTTAATAGTGGTATGGTATTTTAAAATGACTTTATTAATTATC
ATTTTGAGAGAGTTTTCTAGCGATATCGAAACTGAATTCAAGTGGCTTAA
ACAAACTGTGGTTATGGGAAGTGTCATTTCAATGTACATTATACTGTTCT
TAAAAAGGAACTCTTTGTTGTTAGAAACTAAAAATATCCGAAACTCGTGG
TAGCAAACTCATCACTTAGTTATCTTATTTAATGTGAAAATTACTTATAA
TCAGTTTCAAATGATCTCTTATTAATTAACAagagttgatattttttttt
gcttgttgtCATGTTATGGTTTGTTCAAGATGAAGTCTTATGTTGACCAG
TTCGTAAAAATGAGGGCATGACTATGTATAATTTTTCAAACGGAATTCTT
TAAAGATGACTAATTTGTTGTGATTTGATAATCAGCGTTTCGtatacaca
cccctgtctcattagAGATTTAAAGATGCTGAGTTAAATCTCTGTGCTGG
ATATGGAAATTCTACTGCTGggatagactggagtcgtttataatgcgtgt
aatacagtagtataggcgttatatgataatacgattattgttactgGATT
TAGTTTGACTAAAATTGTTCctctattactttttgctttatttctactat
gtctgaattagtcgtctagctttcTAGACTACTGCTGGGATCGAGTAGGa
ttcaaaaatcttttgcaTGATTTTACGATCGATTACTTACCCGTTGACCG
ACCTGAACTTGTCGGCCTCCAAATGCGATTTTCcacattatattatattt
caatatagttttgagcgaccgtagtgcagtggtagagcatccggctatgg
gtcataccaaagattcccaaaatggtacttgatgcttctttgcttgatgc
ctctctgcttgatgctcagcaattaggagaaggatcaagggtacgTGGAG
ATCCAGGGAGAAatagtggcgccctcccctaccttcgggtagatagctat
caaaagaggagccttcgggtcacctccgactgcggtcgcagacttccTTA
CTTCAATAtagttttactttttcattGTTCATTTTCAGTGATGGAAAAAA
CAACAGGACATATCATTTCAACGTTgctttgtatatttttttccttattg
GATAATTACACAGACATTGCACAGAGTGTGATCCACTTCTGCAACCACAA
GAGATGGTATGGTCATCTCACCATGGCGCTTGTTGTGGCGCCCGCCCTCA
TCAATAGTGTGTATACCGCCTGTATGTTTTACTGTAATAAAGGACGGATT
GTACATAACGTTAAGTTCCCGTATCCAAAAGTTGTTTACGTGTTATGTTT
TCTACTTCACGGTCATTACGCACGTCAAATCATTTGGATATACGCACTAC
GTACGAAAGCGCTTAACGAAAGACTGGCCAAAGAGCTTGTTTCAACTGGA
CGAGATATGAGTTTTTATTTGGAGATATTTCTTGAATCGATGCCTCAAAT
GATGCTACAGTTATATATTATGACAGTCATTTACGGAGAGTTGCGTTTAA
TGGGATGCATTACGTTGTTTACGTCTTTCGTTGCGACGTCTTGGGGATTA
TTATTACTTTATAACGACGGCAAAGAACgatttttcgcttttttgatCAA
CGGATTCTGGCTTGCATCACGTGTTTTATCACTAGCCGTATTTTCGAGTA
TCCGACGATTTGCTATATTCGCTATTTTGTCTGTGCATTTCCTATTCGTC
CTTCCGTTATGGTTTTACGAAAGCAAGAGACATCCGTTAGCGGAAGAACG
GCTAACACGACGCGGGTTTTGTCATACGTTTGTTTCGGACTTCTTTTTCG
CTATCTTGTACGCCGTATGTAACACCGTCACGCCGATGATCACACGTTAT
TACTTCCCGTTGTCGTTCATGTTTATTATAGAGAACGTCGTATGTGCCGT
AACCGTTTATTACTTCGGTGAAGTCAAACGTATCGTCAATGGTGAAAAGG
CTTATATCAAATTCAAGAACTGGCCCTACGCGTCAACTTTCATGGTAGGA
TTTTATACGGTCACGATAATTGCGTTTTTATTAACACTTACAGTTCAATT
AATAAAATGTTCGAATCGAATTGATAAAACATTTATGCAATCGAACATTC
GAAAGATCATCAGTAAAATACGACCGATTGAAGCGATTAAGAAATCAGTT
TTCAGAAGACGTGGGACGAATAACGAAGCCGGTTTGAGAACAATCAGATC
TGAAAGTTGAAAATGGATTTTTCTGTATATATTACGAAAGTATACCTATT
TTATGGTCTGACTAGATtgtggtaaaataaaaattgtaaatatgatcttt
gtttataaataaataatgtattaaaaaataatgaattaattgTGATAAGC
taaattattttagtttctttCTTCGGTTTTTCTTCGGGCTAAAGGTTTTT
TACCacctattttattttgaaaaaaacatagCTCGAAAACTGAAGAAATC
GTAAGCCTGGACCAAATGTCGTTATAAGGGTCCACCCAATTTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017592TCONS_00017592Clytia hemisphaericatranscript
TCONS_00017593TCONS_00017593Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017592-proteinTCONS_00017592-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000271supercontigsc0000271:118226..122668 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.47	3.02	4.46	4.86	1.67	0.93	1.33	1.39	1.24	1.56	1	1.97	4.75	3.87	3.51	6.32	3.93	4.19	4.46	5.8	2.8	2.24	5.88	5.25	4.43	4.24	7.72	6.79	4.47	4.44