XLOC_009759 (gene) - C. hemisphaerica

Overview
NameXLOC_009759
Unique NameXLOC_009759
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000267:480441..487416+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009759 ID=XLOC_009759|Name=XLOC_009759|organism=Clytia hemisphaerica|type=gene|length=6976bp|location=Sequence derived from alignment at sc0000267:480441..487416+ (Clytia hemisphaerica)
tttcagttgttactaaaaaaattgaattatatCTGTGAAGAAAGTTGATC ACTCAACAAGCCAAACATGGCGTTGAATCTCAGATTACAACAAATTGTTC TTGGGTTGAAGAATAAAAGCGAACAAATTCGTCATAGAACAGCCCATGAA CTTCAACACTTTGTAACAACAGAACTACGAGAAGCAACATCCGACCAGTA TCCTGATTTAATGGATACTTTAATTCATTTTATCTTTGATTTGGTAAATA GCACTGATGTAAATGAAAAGAAGGGCGGCGTTCTCGCTATAGGTAAGGTT GTATTTTTAAAGTGAACAATCTTCAATTGATGGAGAAGatagatatattt ttttcttaaaatatttttctaatgtctTGTTTAGGTTATATCCAAGCTAA AGGTTTTTCTGGATTTGCTTCAAGTTATATTTAAGCATAATCAAATGATT GGAAAAAACCCTAAAGTTTAGCCGAAATATCAGGTAGAAATTCTTATATT TTCAACAACTACAAGTTAGAAAttcattttaaacttttaaatttcaaaat gaaatcttCCCATCATTTTTGACAGtatgtttgattggtgttgATGGTGG AAATGCTACTCGGACATCACGATTTGCCAACTATTTGCGTAACATGTTAC CAAGTAATGATGTCAGTGTAATGGAGCTTGTGGCGAAAGCAGTTGGTCGG TTGGCTCAAGTTGGTGGTACATATGCTGCTGACTATGTTGAATTTGAAGT AAAGAAATCATTAGAATGGCTTTCAGGAGACAGACACGAAGGTCGGCGAC ATGCAGCTGTAAGTCACTCACCCTACTTAAATTATGTGCCcgccattttt ttgaattgccttttttatttaaagtgaCACTGCATTTCTTAAAGCATCAG AAATCATTGTAAAGTCAGCACTTTTTTACAGGGGAATGATAGCAGAAAAT AACCCATTTGGGTACCTCTAGTAGACAAGGTTTCCCTTTTCTAGGATTAC AACTTTACTTATCATCCTCTCAATACATTATCCTTAAAATACAGAAAATA GTTTTCCTTTGTCAAAGATATTCGATTATAAAAAATGCCACACTTGAGCG TGCTAGAAAAAAGAGATAAAACATTGACTTATTTTTTGTGATCATTTGAT AGTCCTGTCTCACGGTCAGAGAGAGAGAAGAGAACCCTCCGAATCATCCG AAATGGGCTCTATCCCCGGATAGAAACCTACCCTAGGATAGGGAAATTAC CACGCTTACCAGACACTGCTAACCCCTCGCTCACAACATGACAGAGTTAT TGGTGTATAGACGATGGTACTCGGAACTACACAGGAGGACATACATCTTC GCAGGTGTTGAACCTATGAATATCGTCACGTCACCACATGTAATGCCTCG TGTACTCCCAATACCCAGTTCCCCTCACAAGACATGGGTCGACCCGGGca aaggtacattcacttgccaagtgaatcataGCATCGTGTGAGAATCAAAC CCTGACCTCCCAGACGTGAATCAAGGTttataaccactacactactacgT CTAGTACATTTTTGACATGGCTTATACTGTAAGAGATTAGCCGACCTAAA CATCCCTTTACTTGCCTGCCTCTACCtttaagaattctttaaaaaatgat attaataaataatttttttatttttgaaattgtttttatttttcaggtaC TTGTTCTAAGGGAGCTGGCTGTCAACGCACCAACATTCTTCTTCCAACAT GTTCAATCATTCTTTGACAATTTTTACAATGCTGTTCGAGATCCAAAggt gatttaagattttaattttgtggACAAGAAGTGTTTTTCCATCTTCATTA AAGAAATTGTGACAATGTCACAACATTAGATGCCAATATTTTTGCCTCAT AGccttcttcaaaaacaaaaaagtttttgactGAGTTGAGGGTAACCCAA AGGTTGCCTTTTCATTAGCTGTCTACCCGAGAAGGTAGCAGAGGCGTTAC TCCACCCCCTGCATTTCTCCACATACCCTCGATCCTTCCACCAAGCCTGG GATTCAGTTCCTTTCataccgtagctggatgctctacctttatACTAGGG CCAAAATTTGCTCCTTATAATTAATAAGGGTTTTAACTTCTCTATAAAAC AACAAATATTTATGCTCATATCTTATGAACTAAATACGGGCATTCATTTA TGCTTTTAGTCGTctaaatttgatttgaaattaagGGTAAGGTGGTTTGA GTACGAATCCCCACTATTTCCTGGACCCTGACATAGAATTGCAATAAATT GAAATGTAACTGATGATTTCATTTCTATTCCAATTGTCTCATAGCCTGCC ATTCGTGAAGGTGCTGTGGAAGCTTTGAGAGCCTGCTTTGCTATTTGCGC GCAACGTGAAACCAAAAAGAACCATTACACCCATTGGTATCAGGTGACAA TAttatttataaattattttttgattttattattattcTGTGTTCCTCTA GTGAAACTCAAAGAACTAAATTCTTAGCTTATGGTGCTATTTCTTTCAAA TCCGACTCGAATGGTCTCACAAAATATTtcccaaaacttgtttttatttt ttaatattttttatttttaaggccTTTCAGGTTTTGAAAGTTAGCAGCAG AACATCTATGAAAGAAAACATTTGAATTGAAAGTGCGATTCCTCATGAAT TTAAGGCCTATCAGGTTTTGAAAGTTAGCAGAAGAACATCTATGaaagaa aacatttgaaaaattgaaaatgcaaTTCCTCATGAAAATGGCATGGTTTC TTCagaatgattttcttttatttgaatcGAATattcgaaagcagccggcg aggcgacctttttttccgatgtgttctgaaagTACGTTTCAGCTAGACAT TTTAATCTGTTCTGataattaatcagctagaaataatgttgtgttctgac gagacaggggtataatcaaggccATCTGATGTGTTCTTTAAAGAGCCAGG GGTATATAATCGAGAGAAAATAcatgtaatcttgttgcctagtaacccta gaaattttcagaacacatctttcgtggagaaaagaaatatcttacaagta tatcttggcaaaatgtttttcctagattttagaacacatccaaccataaa gtagtaataagtttagggagacaaatattGCGATAAAGGTtccctagaaa tcagaacacatcatctgtataaaaaattgaaggtcgtaacatgtggtctc ctagaggataagaacacatatttccaaaaattttctccgccggctgcttc tgaatattcacactttttaattttacagcAAGTGTACGAAGAAGCAAAGA AAGGTTTCGAAAACACAGCCAACACCAAAGAAAAGGGGACTGGTCTGACC AGAGATGATAAAGTCCACGGTTCACTCCTCGTTATGCAGGAACTCATCCG GAACAGTAGTAGCGAAGGAGAGGTACTTCATACATATATTCCTTCCAGGT GGTCTTACAACaactggaaaatttaaaaatgacgAAATAGTGAACGTTCT CAAGTTtaactaaaatatttgaaactagTTTGTTTGAGTCAAAAATCATA CTAAACATGTCTAATTACAAAACTCTAAAACTGGCCCATAAATTAATGTT TTTTCACAACCccctatatatatttttctggCCATTGCTTCGTATTAAAA TGAAATGTTTATGTAACTCGAACATATTAGCCTTTTGGCATGAGCTACTT CGCTGGACTTTTAAATTGACAGTGCTCTCAAACTAAGCAAGTTTACATTC TACTTTAATGCTCGAGTTTGGAGACTACTACGCTACTGATTATCATTTTT TGCTTCATTATTCAGCGTTTACGGCAGCAAATGGAAGAGACGTACGGAGA GAAACCTAACGACAACATTCGTTCAAGAGAAAtgactttttcaaaatcaa ccagATTTCTTGGAAACCACGGCCACCAACATCAGTTATCCTTGCTACCT CTATTGGAAAGTGGTAATCATCACATCCCAAACTCTCAAAGCAGATTTTG TAAAGATTTCATGGAATCAAAGTTTGATGAGATTTGCACATTGNAATCAC CACATCCCAAACTCTCAAAGCAGATTTTGTAAAGATTTCATGGAATCAAA GTTTGATGAGATTTGCACATTGGTTTTGAAGCAGAAGTCCTCAGCACGCA GTCTTTGTCAACATACTTTGCTGACTTTCCTGCCTCAGCTAGCTGCATTC AAACCCAAAGATTTTGTAAAATCGTAAGTTATATTTAAGATGTCATCCTA TGGCTTTATTGAGAGATGGGCTGTCAGTAAAAGTTGGTCGAAAAGAGAAG TCCtacgtattcatgatattcatgacgtaatgttttttacGAAAATACCC CGGTTTCAGcaagtagtggcaaatttaaactggacaaaagttgtatcaaa tttgccactactggcaaaaaccggggtctttccgtagaaaacattacgtc atgaatatcatgaatttgatgttttttgttgtttactatatttttccttt tcttttatattacttttatgctaaaaaaaaTCAGAAGGAAAATCCTCGAA CCACCAGAGTAAAATAAACAATAATTCTGAGCAAGACACGCTAGATGTAT GCTATCGAGTTGCTCCAGAAattcgaaatttgaaaataatgttgaaAGAA TAATACTATATATACGGGTGAACAGAACTTGCAGCTAACtatttataaca aaataaaaggtTACCGGCCCACACAAATGAGTGTGGGTGCACCGCCAGCC GTATAATGCATGCCGACGCCCGCCCAAGCGTTCTGACCATCTACTCAATC GTGTCTCTATATTTTCAGGCATTTACAAGACACAATCCTACACATGATTC AACAGACGAAAAAGGTAATCTGTGGCCTTTTAGTAAGAAAGGGATGaaca tttttctaaagtttgttaaCACAATCGCTTTCCGATATTTGAATTAGTTA TAGCTAATTagttttaaccctatttttatcagggggggtgttttccacca ggctggcactatTCTGCTAATAGCTCACTGAaaattttttttaacactct gaaagtttttgacttttaatataatcctattagcagcatgtataccaaat tttacaattatacaccgaccagatcaggttttaagacttttttgtgcagg cgtatcataaaatccagctaaaaccctgtaaaatcccaaaagctTAAAtg tagcataacttttgatctaggcttccaactgacttcaaattttgacaggt tttaggtatcaataataaattttaaaaaatatttaaaaaaatttcaaaaa ctgctgacgtcatcaaaaatgacgNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctcattttctgcat ggatttcaaacgtcaattttatcagtatgttaaaaaccggcaaatatgtt aaagatatttattttgccttttagaaattcaaaacagaattttaaaatct ccattcgttcaactttaattgctattttattgaatagtactttttcattg gtcagcgataagtgtgaaagtttgtgatgacgtcatcacctttatgatga cgtcatcaacccaaatttttttctatgaactccttttatggtagagaaca tttctgccaaatttcaagtccagaacttttctagatcaaaagttatgcaa ggctggtggaaaacacccccccttgagaatacaaaatccgaaaaagcctg ataataatagggttaattATAAATATTTAGGCATGTAGATAACAGAGCGC CTGATTAGATTCTACGTTCTGTCCGTTTggcaaattttcagaaaattgga cGAGAGCCCGATGTGGCTGCAAAAAAAGATGAATAAAAAAAGATCAGTTC AAGATTATTTTTTGGACCTTGATCATATGAACCCTCCAATCTTGAAAATG TTAAAACGACGTGTATAAACGTTCATTTATTTTAACGTTcttttaaagat attctttaaGCGCACCTTCTTTAATGACACAGCAGAGTCAACAGAAAAAT TGTCAACATTTGTTTTCACGCCGCATAGGAGTTGTTATATAGATCtatag agtcgatatttaacgtggatagcccagtaatctaggacttttaggtAGTT TTTCGTTAAGGCCTTCCAAAAACCAACAGGGAATATCTTTATTTACTCTC NTTTTAGGTAGTCTTTCGTTAAGGCCTTCCAAAAACCAACAGggaatatt tttatttactCTTAGGAAAGAGAAAGATCGGCTGCATTTGAAGCTATCGG TCTCCTTGCATTCGCtgtcaaaaatgacgtcaatatTGCTCATTGGCGCC ATTGGAGAGATGTGCTAAAAAGTATCAAAGCACTGCTCCCAAGCTCCAAC CGTGATCAAACTAACAGGTGAATAATATTgtttatatacttttttatcCT TTTAATCTTTTTGAGTAAGGTAATTGTTGGTAATTGTctttgtactagta ataacatagGAGGTTTTGAGGGTGATATGGGATTAGTTTGCACTATAAGC GTATTGAGTATGAGCAATTCATCTGAGTAtctttgataaacatttttttc aggaaaaagacGAACCATGTAGATCCAATGGTGTTTGCTTGTGTCAGCAT GACGGCGAAAGCTGTCGGTCCCAAGATGGCAAAAACTGATACccttttca aagaaattattgatAAAATGTTGATCGTTGGGCTCAGGTAAGTTTTTTTG CAGAAACCTTTTTCAACTTAAAAGCACATTACTCTACTTGGTAGATGTTT TAGGATGTCCGGCTAGAAATTTATAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017438TCONS_00017438Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017438-proteinTCONS_00017438-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000267supercontigsc0000267:480441..487416 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.23 5.15 2.99 2.2 21.41 14.65 15.05 18.66 12.7 15.32 12.55 11.41 11.76 12.56 9.69 16.32 12.81 13.82 7.69 10.84 14.16 14.22 6.63 12.1 16.97 14.78 8.92 7.39 6.58 6.28