XLOC_009689 (gene) - C. hemisphaerica

Overview
NameXLOC_009689
Unique NameXLOC_009689
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000264:307846..311352-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009689 ID=XLOC_009689|Name=XLOC_009689|organism=Clytia hemisphaerica|type=gene|length=3507bp|location=Sequence derived from alignment at sc0000264:307846..311352- (Clytia hemisphaerica)
AGTCTTTTTTAAATGTGTTGTAAATTCTTCGGGAAAATATTTCAGACTGT
TTTGCAGAAGAGGAATAATTTATTGACTAATCAACCTAAAATGTCTAAAA
TTTAAACTTGTCTCTTTTTTGATAGTATTTCATATTCGTATTGTCAACTT
TTCAGCATTATGATCTTGCCAATTTTTCAGGTGAATGAAAGTGATGTAGA
GATGTTGTTCTCAGAGAATTTGAGTATTGTCAAACAAGAGTTAGATCGAA
CTAGATTCATCTTACAAGGAAGCTTGGATGAAAATAACCAACTTCATAAA
GAATACGCTCTTTATCAGGTACTAACAATATTATTCACCACTTCAGGTTT
TTTCTATCATTTTTTAAACCTCCGAGTATATCCCCCTCGTTTAGGTTTAA
AGTTTTCCAAATCTTTCTCAGAATAAATCATAGTCCGTATAAGAAACCCC
GGTCTGGATGCCTTTTGTTTCCTTTTATTGTTGCGAACTTGAACTTGTGT
CGAGAACTTATTTTGTTTTGTTCACTTTTTGATCATGTGATTAACTTTTG
AACCAATCCCAAGAGGAGTATTTGGTAACGTGACCAAAAACTGAGCAAAA
CGATTTTTATAACAAAAAGTTACAACAATGCGCTTCCAGACCAGGGTTTT
TTATACGGACTGTGAATAAATCAACTCAGAAAATGAATTAAACTGAACTA
AAGTGTCGAGGAATNAATCTGTGAATAAATCAACTCAGAAAATGAATTAA
ACTGAATTAAAGTGTCGAGGAATAGGAAAGATTTCCTATGGAAAACAACC
ACTAAATTAGCCTAGAGATCCAAGCTGCCAATTATTTCCTAATCTTAATG
GTTCTGCCATTATGTAATAAGTTGGAGTTTTTAAAAATTGTAATAAAACA
ATTTCCTTACTTTTTCTAAAGGACTTGTCATCTCTTCAAATTTATAATTA
TTAATGTATCTTATAAACACTCCAGCTCGTCCCTTCAGGAAAACCAGGCG
GGAAACCAGAAACATCAAAAATGAAAAAAAGATTACAGGCTGGAATTAAA
TCCAAAGTTTGCTTCCTTTCTTTGCGAGGCTAAGAGATTTTCCTTTATTT
TACGTTGTTAGAAATGTATGGAAGAACGAGATCGACACATCGATTTGCAA
TTATCCGATGTCATCTATCGAATTGAGATTCACATCGAAAGAAGACTCAA
TAAACGAAGATGTTGTTGTTTTGGTTTGAAACGTAGCGTACGACAAGAAT
TACAATTTTTACATACAGTTCAAAACCATTTGTATTACATACAGTCTATA
TTAAGCGTGGATTTTATTACAGATTACAAAAGTAAATTGACTAAAAGTAG
GAAAACAAGTGCTTCGTGTAAGGATTTGAGATCATACTTCGTTTGATGGT
ATCATTTTTCTTGCTCGTTGGATTGTGTCAAAATATTTTGAAAGAATGCC
GTCACATGATACGATATTACAGAGCAACACACTTCACTTGGAGAGTTCAA
AAGGTCATTGGTAGACTAATTTTGTGGTATAATGTGATTTTTTTCTCGAA
TTTTAACGAATTTGGTTTCAAATGTTTTTTTGTAATGAAAGAGGGGATCT
GCGAGCAAGACTGTCCTCCGAAGTCAAATATATAAATATTAATAACTGGT
CTTTTTATGTATATAAAATAAACTAGTGACTAGTGCAATCAAAGTCATAC
ATAATATTTGATTAAAAGGGGAATTCCCTGCAAAATTTTAAAAACTACAA
ATGATTTTTAAGTGCTCTAAGTTAATGCTGGAATATGTAGAGCTTCAACT
CTTAAGATCATACATTAGACTTAGGAAGGAAGAAGACCTTAGGATATTGG
GATTCAAAAGCTCAAAAAATATCCCAATGAAGCCGAGGCCACTAAACCAT
TAAATCAAAATATCTAATGAAATATAGCGGAAGTACTGAAATCACCGTTC
TCAACCGAACTTTAAATTCTGAAAAACGTTGAAAATATCCGAAATTCTCA
AAATGTTTTTTGAACTGACTGTAGGATATAGTAAGTTATATCTCAAAAAT
TTGTGCTCTTGTGCTTTCATTCTCGTGCAACAATACAGTAAACTGGATCA
AGTGTTTCATGAAATTGTCAATCACTCTCGATCCTATCTGCTATTTTGTG
GTTGTTTTGCATTTTTCAAAAACTTCCAATTTGTCACGACTTTTTGTTTT
GTCTTTTTAATTTCCTGCAGGGTCGTTTTGTTCAAGTTGCCACCGCCTAA
TGGATGGTGCCATATCCCATAATCCTCGACGACTTTTCCTGTTTTGGTGT
TCACGACTTTCAAACGGTATTTAGAACTGAATTCTGATACTGTGCACAAC
TCCGATCTTTTTGTAGTGATGGTATAATAGTTCTTTAAAGTTAATGAGAA
TATTGACGTTATACAGACTGTTTTGAGGGTGCCATCTTTTCGTACGTCGT
CTGGAAGTGTTATTTCGCATCTGCCATTTGGNATCAAAATTTTGTGCTCT
TGTGCTTTCATTCTCGTGCAACAATACAGTAAACTGAATCAAGTGTTTCA
CAAAATTGTCAATCACTCTCGATCCTATCTGCTATTTTGTGGTTGTTTTG
CATTTTTCAAAAACTTCCAATTTGTCATGACTTTTTGTTTTGTCTTTTTA
ATTTCCTGCAGGGTCGTTTTGTTCAAGTTGTCACCGCCTAATGGATGGTG
CCAAATCCCATAATCCTCGACGACTTTTCCTGTTTTGGTGTTCACGACTT
TCAAACGGTATTTAGAACTGAATTCTGATACTGTGCACAACTCCGATCTT
TTTGTAGTGATGGTATAATAGTTCTTTAAAGTTAATGAGAATATTGACGT
TATACAGACTGTTTTGAGGGTGCCATCTTTTCGTACGTCGTCTGGAAGTG
TTATTTCGCATCTGCCATTTGGTTGTTTACATTTTGTGATTTTGGTTGTG
ATTATTGGCGAGGCTTGATTTGATCCAGTTACTGTTACTTCATATGAGGG
ATTAAAACATTTCGATAAAGATGATTTTCTCCAAGATAAAACCCATTTAT
TTGTGTCAGATTCCTTGAATCGTATATCTCGAGCATCGTGGTTTGATATG
CAATCGAAAAGGTGTTGGGAAGGAACAAAAGCTTGAGGGTGTGTCAAAAC
TGTCACTTTTTTCGATCTATCGACAGCCTTTAAACTAGAAATTCTTTGTT
TCAACAAGTCTTTGTCATAAACACTCAACGGAGTCGGGCAAAAGAATTGA
TCTACCTTTGTCGAATAGAAACATGATTTTGTCTCGGTGACTTTGCCATT
GATGTTTGTCCATTGTAGAAAGATGTCTTTACTTTGACTTGCGAGAACGT
TAGAAGGTCTTTTGAACCGGAATATGATTTCACGTCCAGCACGTAAGAAA
CATAATGGCGCCGGAGATGTTGAGTTGACGTAAGAACAATGACGTAATGT
AAGAAAGATGGAAATGAGGTTGGTTAAAAATGCTGTTTTTGTTTTTTTCA
TTTTTGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017314TCONS_00017314Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000264supercontigsc0000264:307846..311352 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.58	0.76	0.21	0.33	0	0.33	0.17	0.16	0.23	0.19	0	0.06	0.28	0.38	0.13	0.5	1.38	1.04	1.02	0.6	0.56	0.66	0.62	0.94	0.33	0.76	0.54	0.2	0.45	0.13