XLOC_009656 (gene) - C. hemisphaerica

Overview
NameXLOC_009656
Unique NameXLOC_009656
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000261:371486..376978-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009656 ID=XLOC_009656|Name=XLOC_009656|organism=Clytia hemisphaerica|type=gene|length=5493bp|location=Sequence derived from alignment at sc0000261:371486..376978- (Clytia hemisphaerica)
CAAACACTCTGTTGTATTTCCAGTAATGAGGTTGAATTGACGTGAAAAGT CAGTCAGGAGTTGACCGTTTGGATTTTGTACATGAACAGAGGAAATACCT TCAATTTTAGTTTACCAAGTTACCAAGTTTTTAATTATTGATAACATTAA TAAGTTATGAAAAAATGAGTAATAAAGCAATTTTTTATTTTTCAGAGAAG AAAAAAAGCTGAAAAATGTTTTACGCAAATTTCGTATTGGCCAAAAAGGG TCCACTTGCCAGAGTATGGTTAGCAGCGCATTGGGAGAAGAAGTTAAGCA AGACACATGTTTTTGAAACTGACTTACAAAGCTCTATTGAGAGCATTATA TCACCAAAAGTGAAAATTGCCCTTAGGACTTCTGGACATTTACTACTTGG CGTTGTACGCATATATTCACGAAAAGCTAAATATTTATTAGCTGACTGTA CAGAGGCATTGATTAAAATTAAGATGGCTTTTAGGCCTGATGTTGTTGAT TTACCCATTGATAATCAAAAAGCTGCTGCCTCTGCAATTACACTTCCAGA ATTTCAAGAGTGGGACGCAATGGTCAACAATATGGGGTAAGTAAAAATTT TGAGATATGTTTTTAATAATAAATTTTTATCAAGTGTGCGCTATTCAGCT GTCGAAAGTGCTCAATGGTATCAAGTATTAGTGAAATTCAATGAATTAAG TCATTACATCAATATTTATTCATATTGCTTTTCTTATATTTCAAATTAAG TCCGTTCTTATTTTCAAGAAATTTTTCCTCCTTTGTCTGTCTGTACATCC CAGGGAGGCTACAGTATATCATTTCAACAATTCCAGGCTTTTGAACAGTC AATCAACATTCCCTTTGCTTTTTGGAATTAAGTTTGTGTTTATGGAGTGC TTTATATAAATTTAGAACAGTGAAATCATGGTTTCAATTCAATCACACTC CCTGGGGATTTTATTATTCCTTGAACACCTCATTATGCAGTGTGAAATGA TTTAGAGTTTTATTTTAAATTTGATTCAAATATTTGTATCTCTCTTACTT TTCACTCAAGAGTTTCGCTAGAGTTTAAACACATTTTTACCAAAGATGTC ATATTCATATTTGCAAAATCTCAAATCAATCAGACGAACATTTCAAAAGT CATAAAGATTTTTCGCTTTTTGGGGCCTCTTTACCCAAGTTTCTCGAAGG GTTAATTTACATACATTTTGCTTTATTATGTTAAATTAACTTAAGTATTA CAATTAGCTTGAATATATCAATGTTTCTTTACCTTTTTAGCAAATTTGAC ATCACAGTGACGCTCCAAAACAATCAATGTCGAGTTGAAGAAATCACAAT GAAAGAAGATTTATTCTCATCAAGGTTTGTCACTTTACCCACTCTCTTTT GCACTGTAATTTGAAATTGTCGGCAAAAATATTATAGGTTATTTCACTTC ATAAAGAGATAAACAGAATGCAAGATGATAAGATAAGAATCCATTGTTAG AGATTTCAGATTTTAGGGTTATCTCAACCTGAGAAAAGAATTAAACAAAA AGATTTGGAGGTTCTGGTTAGGACCATGAAGTAATCTACATGCAAAAGAT CTCAAACCAAATCAGATATTATCCCTTTAAAATGAGTACCTGTGTAGGTC AAGCATTTCTTCAATTTTTGGATTATCAGGACGTTGTTATTTGAGTGCTT AATTCATTGCAATTTTGAATTGACCAATTGTGATGAATCATCTTGTATTA TTTTCACCGTAGGTATCTGTCAAATGATAATTTCTTTGGTGATGTGCCCT TTGGAGAGACAAGTGATGGGGAAATTATGCGTGATGAAGTCACAATGGAT CACACTCTGAACAATTTGACGGCAGATGTCTCAAAAACACACCTTGAAGA AGATGAAACAGGACTCAAAGATAAATCATCCTTGTCATTGAACCAAAGTA ACCTAGGTAAATGGATAATCTAGTTAGTAGTAGATAAAGCAAAGGTTGTT AGATATACACTTTTCAATCTAGTAGCATCACAGAGGACTTGAATTCTACC AAGGTTGAATGGCTTTAAACTGTTATTGGTGCAAAGCGTGATAGTTATGT ACAGAAATTATAATTAATATTGTCTTTAATATTTTNAGCGTGATAGTTAT GTACAAAAATTATAAATAACTAATATTGTATTTAATATTTCCTTCAGAAC TTGCATTAAATGATCCAATGATGGAGGATGTTGGATTCGGAGCAGGTGAA GGGTTGGATTTTCTTGAAGATTTTGGTGAGGTAAACGGTCTTGATGAAGA TCTGGATAAAGTAGCTCCCATTGAAGATCTAGACGAAACTTTGAAAGATA AAGAAAAGGAGAAAGAAAGAGAGGATCAGGAAGCTGCTGATCGATCAGTT GCTGAAGCTGTGGCTGAACTAACTGGTGAAAAGGAGACAGTTGTTGACCC TGAACCTGTTTTAGATGAAGATGATGTGGATAATGAAGCAATTGTTCCTG ATCAACCAACTGGTAAGTGATTGAATTATTTCAGTAGTAAACATTCAGTG TCTTATAAGTAGAACTAGGAAAATGAAAAAGGAACCTGTTCTTATAGTTA TTTAACTATTGCAGGTGAAATGGAATATGAAATAGATATGAATAACTTTT GTGGTACTTTTTTCACAGTTGACATCCACCTTTTTAAGTGTTGTGTGACC AGTGTGATTTTGTTTGCCTAATAAGAGGAGAGGGTCAAAATATGAAATTT GCTACAGTATGTGCCCAATGAACATAATTCTCAGCTACCTCAACCATATC TGCAACCACAGTCGGAGGCAACCCGAAGGCTCCTCTTTCAATAGCTATCT AACCAAAGGTGCCACTCTTTCTCCCTGGATTGCTCCACTTACCCTTGACC ATTCTCTTAATTGCTGAGCATCAAGCAGAGGGACAGACATAAGTATCATT TTGAAAATTTTTGGTATGACCGGCTGAGGGCCGAACCCACAACCTTGAAC ACCATAGTAGGATGCTCTACCGCTGCACTACGGTCGCTATATCTATACAT GAATCGATGTAAATTTTTTGAGATTTCAAGTTTGGACTAGGAGAATTCCA TAAACATAATGTATTTTAGCTCTGTATCCTTTGTTGTAGACAGAGGCTTA TTCTATCAATTTTTCCCTAGAAACCGCCACAACTGGTATGGAGACGACAT TGTTCTACACTGAAGCCGTTGCATTGGAACCAGTGGAAGTGACTGTTGGT AAAGAGAAAAGAAAGAAGAGGAAAAGAAAGCTTGTTGTGGACAATGAGAA AATTATACAAAGAGATCAAATGAAGAAACAGATTGAGAGTTATGACGACT TGGTGAAGGCAGCTGTTGTGGCTCCACCCACACGATGGAGGTATTTGAAC TTTTCTTCCATTCCATAATAAATTTCAAATTTCCAGCCTTCAACATGAAA AAACTAACATGCATGTCACACTTCCCAAAATATTTCTTTATCCATATGAA TTTCAAGTCCCCACCTTATGCATGAGAAAACAAACGTGAATGCTACACTT CCCTAAAACATATTCAAATTCCCTATAGTATAGATATTATTAAGATTTTA AGAACTTGGGGTTGGTTGTGCATTCGTGCTTGTAGCTTTATTATTTTGTA TCTTTCATCTTTCGTAGAATGTCTGCACTCGATGTAACAGCTAAAATGTT ATTCGACCGACCCATCTCCTTCAAGAGCAAAAAAGCAAGACTAGAAGAGC TTTACAAAGCACATCAAACAACCAAAATTCCTGAAGATTTGATCATCCCT TCCTCTCAAGAAGACGAAGAAGTCCAACTCGAGGATCCTACAGAAATTTT ACGCGAGGCTGACGAAAACGCTACTAATCTACCGGAACTTACAGTCGAGA ATACAGATATCCAAGAGACCATCCTCCCAGAGGAACAAGAAGAAGAGAGA TTCGAACCACCGATAGACGATATACCTCCTCCTATGGACATTGATATGGA AAACCCAGACCAAGAGAACGATATAACCGTCCCACCACCCTTCCAACTTG ACGTGACCGAGAAAACCATAAACGAAACGGTGAACGAGAGCAGCGCAAAG GAGACTGAAGACGAAGAGCCGGAAGCTGAGAAAACTGATCAACAAGATAA ACGGTGGACCAAACGTACACAACAGACTCTCAATTTATTAGAAAAAACAT TGAAAAAGAAATCAGCTCCAGTAAATTTTAAAGACTTGACTAAGAAATAT AATCGTAAACAAGCGACACATAGGTTTTACACATTATTAACTCTCAGTAA AGAGAAATGTATTACAGTTGAACAAGATGGTTTGTTTGCTGATATTTTGA TCCACCCTGGGGAGAGATTCAATTCATATTCCTAAAACTGTTTTAAAAAC CATGCCGGATTATATTTTATGATGGCAGTTCTTTTAACTTATTGGTGTAC ATATACCGAACGACCAACCCGGTTTAACCTGAAAATCCTACCGGCCTTAT GCTTGACAATATACACCCGCGAGAAAACAACAATCGTACTAATTTGCTGC AAAAAAACGATTTACAAGATATATTATGATGATATTTTATTGATTTTAAC CATGTTCAAATTTTTTTTTCACAATTCATCAAACTCTAAATTTTTTCATC TCTATTTTCATATATACCACCATCTCTAACTCTAACGATTATAATATTTT ATCAAAAAAGTTTTTAGAATCCTAATATTTTGAACATTATTATATTTCTG TGATAAGAATAAGACACAGGCAGAAGGAATATTCCAAATCAATCAGGAAA GTAAGGGGCTTATAAACTCCTTATTTTGACCTTGATTTCATAGTTAGGCT TAGGCGTATTTTATGTTAATTATTTTGTTTTATAATTTTCGTTCTTAGAA ATTTTCCCTTTTATATTGTTTATTTTTTATTTTTTCTGGTATGTTATGTA GCAGGCAAGTTTGTGAAAAGGTCTGCTAACTAAATGCTTAGGAAAGTTTG CATTAAATCAATTGACAATACATTACAGCCTGAATGTCTCGCAGAATCTT GAACTTCTAATTCATGAAGAAGGAATGTTTCGGCTTTTGGGAATGGCTTG GCTTCGCCGTAATTGATAAAAGTTTACTGCACAGTAAATATTATATTAAT ATGTCATTCAAGGATCCTCTGCGAATCACTTTTCATAATAAATTTAGGTT TTGTACTAGTTGAGCATTCTAAAGAGTAAGTATCCAGTCCTTTCATCAAG TCTGTGTTTTTATTGTAGAGAATTTTTTAATGTTTAAATGCGTTTTAGCC TGTATCAGTTTTTTGGTTTGTTTTCATTTTTGGTTACATTGTAAGTATTA TTATCATTAGCATCAGCGATATTTTAAATCTTTCGATATTATTATTATAT GAAAATAAAAAGAAACTTGTATTTTGTATTTGCTCACTACTTACTTGTAC AGGGATATTAAACATTTTAAAAGAAAATTGAGTTGAAAAAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017259TCONS_00017259Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017259-proteinTCONS_00017259-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000261supercontigsc0000261:371486..376978 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RAD21double-strand-break repair protein rad21 homolog Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.63 6.12 33.36 51.68 148.55 111.95 48.37 51.79 27.22 33.87 25.23 17.7 13.69 12.97 15.56 19.12 35.79 31.82 7.28 8.01 20.34 20.11 13.51 15.47 33.22 37.29 11.53 7.66 10.09 11.22