XLOC_009645 (gene) - C. hemisphaerica

Overview
NameXLOC_009645
Unique NameXLOC_009645
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000261:312394..315502+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009645 ID=XLOC_009645|Name=XLOC_009645|organism=Clytia hemisphaerica|type=gene|length=3109bp|location=Sequence derived from alignment at sc0000261:312394..315502+ (Clytia hemisphaerica)
CTTGAAAGTGGAAACCGTAATAATGTTATTGTTCAAAACGACCTACAAAC
TTATGTAAGAAAATAGTTCGCACTCCATCGAATTAGTGACAAAAACACTT
TATTTACTTGCAATGTTTCTTAACAAAGCTAAAGGAAGGAGAGCTCATGT
TACAGCATCATAATATTAAAACACAGATTTCGCATATATACTTAACaagt
cagcaaaaatttctcaatGAAATCAAATACACTATAAAAACAGAAATACG
AACTGACACTAGTCAGAGATTCTCTCAGAAAACACACAGACAGGATTTGT
GGATTCGAAAATGGGTTTACTTCATTTAGTAACAGTTGCTGCACTGGCTC
AACTCGGCCTAGCGGCACAACCTTCAGATCCAACACCATGGCCCGCACAA
TTCACACAAACTTTCAAAGAAACCTTCTATTACCCAGTAATTGGCACCCA
TACAACGACAGGGACCTACTACTACGATTTCAAGAACTTGCGATACCGTA
TTGACCGCGCGAACGGACGTTACGACCGCTACTGTGGATTTAATGGTGTT
CGCGCTTTCCAAAATACTCCTTGCTCTCAACTGGTCATCAAAGGACAAAG
ATGGTTGATCTACCCAGAGAAGAAAGACTGCTGCATGTGAGTATCCTATA
AGATATATGAATTAGAGTTTCTGTCCAACTACACTCAgtagatttgggtg
gcagagcaagtgtatgcatttcgtccttattgtGACTTGTGCGTATGCAC
CCTGAATAAAATATACGCACAATTGACATAGGATGGCTGATAAATTGTAG
ATTTACAGGCCGAAAGAATGAAATTGAATTGGGATTTTGTCACCGGCTGT
ATGCTGTTAGTTGGACAGTAGTCCAAGGGTCTGAGGAATTTATAGCTTAC
GGCTTCTGCGTGCCACTCCTGTCTCTTCTTGGCTCAGGCTCTTTCAGAAT
TTACCCTCATAAGTAATACATTTGCTAATGGCTGTAAAATCGTTTTTCCT
TAATCTTATTGAGATTTCCGACATTTGTTACTCCCGTCAGAATACAGAAC
AAGAAAAAAtcgatttccaaaaaaattcacgTAAAACTCACGGTggtctt
tttttatcaatttcaagCAGACAGATATATGTATCCCCTAACTCCCAATG
CTTCTTAAAACTCATTGTTTTCTTACTCTTGTAGGTGCTGCACTGCAGCT
CAAGGGTGCGGTATTTTGAAACCGGATTGGACCAAAGGAGCTCTCTTCGT
CAATTCTGACAATGGAATGTATAAATGGAACCAAAAAGGCTTACAGGATA
ATTTCTACATTGAACGCCAAAGCGATCGCCGAATGGTCCGAATCAATCAA
GTTCCCAACGACATCCAAGATTACGATCCAGACTCATTTAAACCAACTGT
CGACCCAAAAGTTTTCGAGCTCCCTTCATATTGTCAGCAAAAAGCATGCT
CGTACGCTTCCACTTGTCGCGCGGTCGGCCGCCGTTAAACCGCCTAATGT
GACTCGTTTGGAGCAGCATTTATTCCAGGCTTTACATTAAACgatttttt
aaaatgtttattatTCACATGTTACATACTCTGAAATATATTTCATTAGT
TTTAAAactgaatttgattttttttttcatctgtaTCAGTAACTCTttca
aggttttatttttacataagtgttcccgtttcataccagacatatatttc
atataaggacagtgtctgcctattgttatctTGCTCCATATCCGTATCAT
tgaatccaatgtgaaaaagcttgtaaattaataTTGATGAGTAAGGGAAC
GAtaccactcttatttaaaaacaaaacctttaagacaACAGACAACCTTA
AGCGATGTCCATTCTTTTCAGCAAccattttttgatttcaattttgattg
gGAAAATTTGGCTTAATGAACCTAGGCCCTAGATGTTTAGCTGTTTTAGT
TATGAGATAATTATTTCgtgttgaaattttcatttaacCTTTCATTTAGA
TAAATAGAGTCACAGTGGTAAAAAGTATTAGACAAATTCGGGCGAAATAT
Cgagagataaaaaaaagttattaggcacccagctggcacacaacgttgct
tcaacgttcatctaacgttatatggacgttgtgaacgttagatgaacgtt
gagacAACGTTGTGTTCCAGCTGGGCACGGAACAAACACCGTGTAGCAAT
TATAAATTAGTTCTTCATTTCTCGATTTGAAGTTTCCTCAAATATTAGAA
AAGTTGATTTACAGTGTATATATTGTCATAGAAAAATCTTGACAAAAGCA
AGAATTTACTAGAGCGAAGAAACCAGGTTATTTGTGTATGCCAAAACAAG
Aatagagaaaagaaaaaagaaatcgttgtaataaaaacattagaacccaa
gacaaacaaacaaacagctATAAGCCAAAAATCACAACCTATTCCTGTAT
TCAAGTATCAGATACACTGTAGGAGGAAAGAACTCGCTATGCTGTCTCTA
CAACTTCTCACCATTTTTGCTTTTGCGCAACTTGGCCTTACAGATCCATC
TAACCCTGCACCTTGGCCCGTCCAGTTCACTCAAACATTCAAAGAAACCT
TCTATTACCCAGTCATTGGTACCCATACAACAACAGGGACCTACTATTAC
GATTTCAAGAACTTACGCTACCGCGTGGACCGCGCGAACGGACGCTACGA
CCGTTACTGTGGATTCAACGGTGTTCGTTTTTTCGAAGACACGCCTTGTA
CACAGCTCACTGTAAAAGGCGAACGGTGGCTTATCTATCCAGAAAAGAAA
GAATGTTGCATGTCAGTATATATACTAATAAAAAGTGAAATCAactcttt
caaaatttcaaagctcTACCAAGAAGGATTCATTTATAGGATGGTGTCTA
AGAGGTTTCAAAATATATGAGTTTTTCTGAGCAATTTTGCGGGCAAAGGG
TCAAATTTAATGCTTATCCAAAATGAGGTAAAACCAATGACTCGAGATGT
TTTCGATTGATTTTATTCTTAGGTGCTGCACTTCAGCTCAAGGGTGTGGG
ATTTTGAAACCAGATTGGACCAAAGGAGCTCTCTTCGTCAATTCTGATAA
TGGAATGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017242TCONS_00017242Clytia hemisphaericatranscript
TCONS_00017243TCONS_00017243Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017242-proteinTCONS_00017242-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000261supercontigsc0000261:312394..315502 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.63	8.89	8.69	7.5	18.02	17.89	278.46	323.28	266.18	265.87	370.26	293.1	438.23	400.77	231.39	723.5	117.89	215.11	543.04	584.16	541.95	551.26	141.29	203	214.49	268.5	274.56	277.77	408.15	229