XLOC_009638 (gene) - C. hemisphaerica

Overview
NameXLOC_009638
Unique NameXLOC_009638
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000261:132565..136252+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009638 ID=XLOC_009638|Name=XLOC_009638|organism=Clytia hemisphaerica|type=gene|length=3688bp|location=Sequence derived from alignment at sc0000261:132565..136252+ (Clytia hemisphaerica)
gAAAACTTCAGAATATTATTATACAACAACAGATACATTTGCTGTGTCAT
CGCTGATGATGTGAAAGTATTTAAATGGCTCACAAACAAATAAAAGTATG
TTCCAGAACGAAAGTGAATATCGATCACGTAAATATAAAGAGTGATCGAT
CGTTCAGAGAGAATAAGGTTGTAGAAAACGAAGCTTTGTTGTTTAAACTA
ATTGTACTTTAACCGACAAAAGCTCACAATCAAGGACTCAAGTGGTTGAT
AGACGCTTTGTCTAAACAAAGCTGACAGTAACAGTGACAACTTGAGTGAA
CGAGTTGCTACCAGCCTGGTTCATGGTTTATAACCAGCAGGCCTTACTTT
GGAGAGTTTGTGTGTGTGTCAAAAGACTTTCTGAACAGACCAAGACTGAA
TATTGATTGTGATTTCATAAGAATTTGTGGAGAAGTGGCTGGAAAGAAGG
AGAAGAATTGGTTGTAAAGTTAGTGATGCAGTTTATCAAAGAGTTATTGT
GTATCCCATCCAAGAAAGCATTCACTCTTTATAACGTTAATGTTCAAATC
GAATATGGGTAAGCTACTACTGGTCTCTGATACTATCTTTCGTTCTCACA
GACCTACTGcggaaaaattggcaaaaaaatcGTCCGCAGTGGAAAATTAA
CCTCCaacttttgtccccactgaaaacaatcaaataaaccCATTCTCGCC
gtaaaatatttactatttttcccatccccactgaattttccgactggaaa
ataaaagaattaaaatcgacagccataaaaaatatgaaaatattaatcca
catcgagtttcagtccgttatttttatctccaCCGGTCGAGAAAACTCAA
TCGACTTGGGtacttaagggaacttatttcggcgggaactaattttggcg
aattcggcgaatttagacaaagtattagttcccgccaaaatttagaaaat
tcatcaatagccaaaataatttttcgctaaaatttaaaatttttaggatt
ttttccgcccgtcaaaattagttcccaccaaaataagttcccttaaggta
atagaTATTGGGTCCTTACACGCAAACGATCAAACTAACACTAAGTTCTT
TACTTCTAATTAGAACCATATGAGGATACTTGGGTCGTTACATGGAATAC
GCCTCACAAATAAAGAAGAAGATTCCACAAACGACCGTCAAAGGGAAGAA
AGGAAGAACTAGTAAGTACTTTTCAATCTCCTACCTAGACGAAACTATCG
TCTACACATTatcactaaaaagggaataattcaggaggcgggcgataaat
ttgaaaatggaggTCAGTTCGGGCAGAGTAAACAGTGacggaggtgttta
cagtgttttGTTCCAAAGCTCTACCGCCAAtattttcccgtaaaccgcca
cGACTCTGCGCATATGtactttcccgcgtttactgaccctctaaacggac
gatagcatcgccTATCTCGTACCCAGAACTTTGGATTTACTTATGGAAGT
TGGTGAGCGCTTTCTCCTAGCCAAAGTACAATTTTtgcacaaaattttca
aaagtttataaaatcCGAGAATTATGTTCTTGTGAAACTTTCATTCATTC
GATATTGAAAAAAACTATTCTTTCAAAACATCGAGAAATATTCTTTctct
aaaatgaaaattagagAGTGACTTATTGTCTTAACGATGAATAAGCAGAT
ATAGCCCTCCTCAATCGTTAATTACTCTATGTGAATTTGGATCAACATGT
TTACCAGTTAAAATGCTATGTCATTTTCGTGATGGAGCTATCTCAATTTA
TCATTTATCTTATCATTTATAACAAAGCTAATTTGATGAGAGTTATATCT
CGTAAATTCGCTTGAAGAGTAAATCTTAGATTTGAAAATTCTAATGAATG
TATCACAGTTTATCATCAGTCAGAAGATCCTGTCCCAAACTATACATTCT
GTTCCTAACAAAAAACATATTTAAACCATGATATTTTCTCGTCATCAAAA
AATCTAATTGGGTTCGGATATTGAtaattagataaaaaattatgaTGTTT
TTCACTTTGGCCGAAAATTTCAATTGTACAAGTTTTATTTCCTTCTTACT
TCAATCAAAGACATCTTTGTTTAACTATTTAACcttactacacgtttttt
tcgtaaggaacacgtttataagcaacttgaggctgaaaatggtcccaAAA
AATACGGAATttttaaggaactgctcaggctgagaataagaaaacaagtt
aaggAAACAGTAAGGGTAAAACTTAAACTTGTACACATTTACAAAACCTA
AACAAATCCAAACTTATAGCAGCTAAGTAAACGAGAAAGTCGATAAGGAG
CTTTGAGGTTGAAACTCTCTGGAAAATCAACACTACTAGGGAATAAGACT
GGAACTATCCTTAAGTGGATTATTTtagcgtggatttaatttggcgattg
atcaattttgtgaaatttggcggggatttaatttggcgaattgggaATTT
GGAGACACTTAAATATATGAAAATTACTACAAAGTATACTAAAAAGGTGT
GGTTTTTCACATAAtactctttttgttaaatttggcgaatggccgatttt
tgaaatttcgacgaggatttaatttggcgaattttatGAAAATGCGGTTG
GCTCACTTTATAATGAAATTGTCAACCTTCATTCTTCTTGGAGGTTATcg
gatttttgacaaaaatcttatCTTTGTGTTAAACACCTAAAATTGAGAAT
CAGTCCCCTTAATAAATCAAGAACTTAATTTTTCAGAATGCAGTGCTAGG
TATTTACCATCCATTCTTCATTATTTCTTCAGGTTGCTTTGAAATTACCG
TCAACGGACAAATTGTCTTTTCCAAATTATCACAAGGGGGTTTCCCTGTG
ATGAAGAAGCTTATTCAACAAATCAAAAACGCTCAAAAGGGAAAACCCGT
CAGACAAGTCAGTAGACGACATAACGACATAACAAAGACGTTATTTTCAT
CAAGCAGTGACGACATTTGTAGATTATAGATCTCGATAGTAGCTCCTTAT
CACGTATGATTTGAGGTgacccagacggcacacaacgtcaaaacaacgtc
catgtgacattcttaacgtccaaataacgttatttgaacgttaaaacaac
gttgtgtgccagctggggattGTTTGCAACTTATAAATACAACTTTTCAG
TTCAAATGTAATCATACAAATCTTTGGAGTCATGTCTATTCAAGGATATC
TATTCTAAAGTTTAtttatcagaaattttatgcctCGGTCAACCAAGCAT
GTACCTATGACGGTTGTCAACATAAACTCCTGAATAAGCGAGGCGTTGAC
AACCCGATCTTTTTTATACATTGCAAGGAAAATCGAGGCGAAAATTATAA
TGttagggtagggcgtcaacagtcatttgtggggcaaagtcaaaaaattc
aagatgtagtgtttttttatgaaaatttaacctattgtgaggcattctgc
gcaatttttaaggtcagaagtccaaaattggccgNNNNNNNNNNNNNNNN
NNNNNNNtccaaaattggccgaacccccctgggggtactgattcgcacta
caggcaaaaattggaaaaaatggcattttctggccttttcaggcctgtaa
atatgtcaaaactattgcaaatcttatttttttcattt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017221TCONS_00017221Clytia hemisphaericatranscript
TCONS_00017222TCONS_00017222Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000261supercontigsc0000261:132565..136252 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.94	2.01	3.8	4.38	4.94	2.8	4.77	4.8	5.62	5.26	8.97	6.55	6.11	4.4	7.9	7.15	3.66	6.05	6.5	16.48	5.67	7.52	2	3.8	2.85	3.71	30.38	45.19	3.58	2.59