XLOC_009599 (gene) - C. hemisphaerica

Overview
NameXLOC_009599
Unique NameXLOC_009599
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000260:202065..207958+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009599 ID=XLOC_009599|Name=XLOC_009599|organism=Clytia hemisphaerica|type=gene|length=5894bp|location=Sequence derived from alignment at sc0000260:202065..207958+ (Clytia hemisphaerica)
AATACAAAGGAATTCATAGAGTTCAAGAAAATCAAGTTCACCTGGTAGCT TTTTTGTAGGTTGACATATAAATGTGTTTCGATATACGtatattaaaatg tttttagcacactttatttattgatttttttaggtATTCTGAAGATAGAG AGGAGCCTTCCAGCCAATCTGATGAATCCAAACCAAAAATTCTCTTGATG GGTTTAAGAAGGtttgatttaattttcaatgttttctaGCTTTTCCATAC AAAAAATCTGCACATAAAATTGTTATTAGCAATGTTCAAAtatctttcat tattttcaatgtttttacaaTGTTGAATGCGTAATAGGGTGCTgagtaat tatttaaaaaaaggcaaAGTGTCCACGTCAGTTAGTGGAAATACCTCCAT TTAAAGCATGTTCAGAGTTCACAATAACGACTTTTTATTTATCACGGAAA CAAAAGAAAGGAGAACAAGTCATTAAAACTAAGAGTCAGCACTCTGTGTT TGTGGCGTAGGTTTTGTAATCGATATTCACTGTTTTTTATTTCTACGTTA TTTTTTAAACCTCTTAGTTAGGAGAACGTGTCATTCAGTGTCATtcaata aggaattttataacacttcatggcagatttaaaaaaagacaattagatag aaaacgaaagtttcttcgtttttcattttcgaattTATGGGGAAGAATAT TCGATATGAGGATTCCATTTCCGTAAAATTgcgattccccatggttgcCA AATGGTagctatgggtaattcctttgttcttttgctattttcttttgttc tgtgTAACGTAAAGACGCTTTGTAAATCGAAGTACTTTCACTAACTGCAG TTTTGAGACTGAAAAACAGAATGGAGTGAATGAAATAAAATACATAGCTA GTGGGTCAAAAATTAAACATTATATATCTTTTTACTGTTAGGATCAATTT GCTAATTGAATGTCTTGCAATTTTACAGGAGTGGAAAATCTTCCATTTTG AAAGTTGTCTTTCACAAGATGTCTCCAAATGAAACGTTGTTCTTGGAAAG CACAAATAAAATTGTGAAAGATGACATCTCCAACAGCTCATTTGTACAAT TCAGGGTAATGTCACAGTCTTATTGTCttctttataaatctttttacatt tttttacaattttttgacAGGAGAAACTTCAACTGATAAAACCTAGTATG TCTGATCTGTACTTATAATGGCCATCGTCCATAGAAACTAAATTCAAAAA AGGTCAATTACTTCTATAATATGTAATCAATCAATGATTTTAACAACATC ATTATTCCAAACTTTGGAGCTAATGGAGTAATTTACTTAATTATGACCAT AtctatgtttaaaaattgtgctCTTTTAGATATGGGATTTTCCTGGACAG ATAGATTTCTTTGGGCATGATTTTGATTCTGACCAAATCTTTAGTGGATG TGGTTCACTTGTATTTGTAATTGATGCACAGGTAAATTAAATGATTTTCT GAAAagcaaaaaaggtttgttcCTTACCAATTCTTACAAGTTCTTCACAA TGAACATCTTTTATTCAATACTTTACTTACTCTGAAAAATCCCTTCTTTT GTCAGGACGACTACATGGATGCATTGACCAAATTACATCAAACAGTTACA AGAGCTTACAAAGTATGTTATTATCTTATGGGACGAATTAATTTAATCCC AATTCTTTGTGTTTCTTAgggcttttttcaaaaatgtgagATTATGTAGT TTCTGTGAAATTTATTCCTTAGTTACCaagaaaattaattgaaattgcAT GAATTTCTTCCACTAACCAAGTTCTTTGTATCTAGTTCTAAGGAAAACTT ATTGAAACATTCAACTCTTTCACCTTTGAATCTTTTATAGGTCAATCCAA ACATTAAATTTGAAGTTTTCATTCATAAAGTTGATGGGCTCACAGATGAT CATAAAATAGGTTTGTTGGGTTCTTTTTTTTAACGATTTTATAAGCTCAA CAAGATAAATACAAGACAATCGTCTGTTTTCTAATAAACTTCATCTTGTT TTTGCGTTCTTTAAAATATTGGGTCCAAGGAAAAATTTCTCACTTGCAAT CTATAAGGGAAAGAAGACTAAAATCTTAAGTTGCTCTTTGATATAATTAA TCAAACTCAACTAGAGCTTTCTTTTTTGACAGTTAATCCtgtttttggaa atttagaTACACAAAGAGATATTCACCAACGTGCCACTGGCGAACTGGAA GATGCTGGTTTAGAAAATCTTCAATTAAGGTTTGTAATACTGTTGTTAGT TCTTCCAACAAGTaagcgtttttatttttcttctgttATGTATTTAAATG AATATATTGTTGGTTTTTAGCTCTAAATTCTCTGGAATCAATTTTGTCTA CTTTGAATATTTCAGTTTGGAgtgttttgatttaaaatcttttattcatt ttctttttttagcttTTACCTAACAAGTATATACGACCACTCCGTCTTTG AGGTATGGAATTCTCTCGAATTTAATGAATGAGTGGTTTTGAATTTGATA TTATAAACTCTTCCTTTCAATTCATTACAACCTCTGATCatatattttct aaaagaagGTTTAAAGTGTTGATGAATATAAATGCCACACTTTCCCCCTC GTTGAACTGTTGATATGCAGACAGGGTGTTATAACTGTacaatattcatt tttttcttttaggcaTTCAGTAAAGTTGTACAGAAATTAATCGTCCAATT ACCTACACTTGAAAATCTTCTTAATATCTTAATACAGGTTAGAGTACTGT TATTTCTCCACTCTTGTGTTACCGAGCTTCTAATCTAATTTCCTTGCTTT AATATTAGAAAGGAATGTTGTAAAGTCTTGTAAGAAGGAGGAACTGCCTT TTAAAAAATCAACACTAAATTCCCTTTTTACTTTATTTCAGCATTCTGCA ATTGAAAAAGCATTCTTATTTGATGTGGTCTCCAAAATATATATTGCAAC TGACAGGTATATAGTCAATTGTTTGTTTGCTACTTTTGCAACTAATCACT AATCAAGTTTTTCGCTTAATCTTCATAATAAATGTCAGAAAATCACACAT CCAGAAAATACTGCCATTCGTGAAATTTTATGTGTTTCGACGgaatcttt attttgaaaataaatttccaaaCAACGTTTTCAGAAAATAATGTCGTTTT TTAAAAAGGTGGATGAATTGACTCAAAAACAAAACTATTTCTCTTGGAAA TTAGCTTTTAACTGGTTCAAAGTAAACacgtttttcctttttttctattC AGTGCACCAGTAGATATGCAGTCATACGAATTATGTTGCGATATGATCGA TGTTGTTATAGACGTGTCTTGTATCTATGGGTAATTTGTTTTAATCTTTT CGAAAATACTAAATTAAAGTCCATACCTTCTGTCTGAGAGATATCgttga aaaatgttttatcaTTCGTATGCATGCCTAAGTCTCCCCCACCCCTGGCG TGGTAATAATAAAATAGATTCTTTCCACTTTTGACTTTCGAAAGCAATTA ATCGAAAGTGAAGTTGGGATTGGTAAATAGGTTACAGCTAAGGTTCTCGA AAAGCCATTACCTAGATGAATGGTACTCGTGCATCAGGTGATTGCGGCAC CCTTGAACTCTCAAAAAAGTCGCCCTGACTTTTTCTGGGTGAATTCATTT AATTCGTCTTTCCATAATGTCCGTTGAAAAACAGCTAGTCACCAACTATA ACCTGTCCCTTCCATCATGTTTTCTtcatgtctgaattagtcgtctagca tgctacgATGTAATATCGTGTTTTTCTACAGGTTAAATGAGAGTGGTGAT CCGAACGCGTATGATACAGAAACTGCTTCAGTTATCAGACTCAATAATTC AACCGTCTGTTATCTACGAGAAGTCAACAGGTATGACAAATTCAAATATT TACTTTAAAGGGACAAAACTTCTCAGATTTCGTAGATTTGGGTGTCATTC GCAAATTTAGGTCCCAatttaaacttcaaaaaaccTTAACTGCGAAAAAT CTTTTAGACAAAGTGATAAATTCCAACAACCAACAGATAGAGCTGGTACT GAAAAGACAAGTTTTTCCGATTAGTGTGACAATATTAATTCCTGCGAAAT TTTATTCCTAGCTATAGAGATGTTTACTTTGCTCAATAAAGATTTGCAAA GTGCACTAATTTTTGACACCATGTGAAAACCATTATTGTAATCAGAGTAT TACCTTTGATGATTGTTTCAATATAGAAAGTACACACTTAAAAAGTGGAT GGGCTTTAATGCACAAGAGATGGATTTAGATTTGGTTCATATAAAGTTTC CTTCTTCTTCCAACAGGTTTTTAGCTTTGGTGTGTATTTTACGTGAAGAT AACTTTAGCAAACATGGGTTGATTGATTACAACTTCCATTGTTTCCGCCA AGCAATTCAAGAGgtaaaaatcttcatttctcgGATAGTCGACTTTATCA AAGTTATGTAAATtgaaatcctcaaaactcaactgggcttacaattttac aattttacaattctttgttcaatcaatagatattcaatttccaattgaat aggtttttgagattgaaacATTAAGTATAAGAGTCATAGAATTTGGCATA AATTTTGAGGATTTCACTCTTATAGAAATTTgtcttttttgggacacact gtataatATAAGGGTAGTTAGAACGGAACAGgcgttaagaaaaaaaaatg gcgGAGTTGAAAAAAGTACTTTCAacaatcaattttaattcacaagcttt ttcacattggattgacatgaatgtggagcaagattgatcctgattgatca gaaagagggaaagaaaatcaattttttgtctaTTCAGTACAAAATCGAAC ACATTATAACAATAGGAGACACTGTtctgatataaaatatgtgtctgata tgaaacgggaaaacttatgtaaaactaaaccacagatttctgtaaagtcc gaagggctagatgtcgtgcttcaagctcttccaagctcttccaagcaaaa aaaagtgaatatcgcaaaaaatattgctgctattttCTTCGAAAAgtttc ttattggtcaagcgctgaaattctattgtaatgttaCATGACCTAGGTAG ggtttcctacctaacctcggcatacttttcagccaaagcacgatatctag cccttcgggctttataaatctatatgactaaaacctttaatataaaaaat ccttaaatttCTTATCATCTTTTCGCAGGTTTTCGATTTACGACAACAAG CACGCGAACAAGGCATCAGGGATTCATCATCAAGACCTAAAGGGGAATCT CTTGTCGTTTAAATGCAATGCACCAATCAAAAGCCACGCTTTAGCTGCTT CAACCACTTAANTCAAGACCTAAAGGGGAATCTCTCGTCGTTTAAATGCA ATGCACCAATCAAAAGCCACGCTTTAGCTGCTTCAACCACTTAAAAAAGA CTATGGTATCATGTGATATTGAGATAGCCAATCAAATGcatttaaaaagg ttttgttGGGATTGAGTTGAAATAGTAGTTATCATACATTGCACACTCAG TGACTGTCACTAGAACGAGAGAGAAAGAAATGACGATCTCTTATACCGTT TAGTTTCCTAAGTTATAATATTCTTAAAGACAGTTACGCAAAAGGgatat tttaaacaattttcttCTGCTAGATTCTGAGACTGTGTTGGGGAGGAATT ATGATCATAATACCTTACCGGCTCTTCTGACGCAGGTCCTTAAAACGCCA AAGACCAAAAAATTAGGCCGGcttaaaaagggccgataaggttaTAAACG TGACAAGAATATAATATTCTTATAGGCTAAGATTTTAAACTCGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017150TCONS_00017150Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017150-proteinTCONS_00017150-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000260supercontigsc0000260:202065..207958 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RRAGCras-related GTP-binding protein C isoform 1 Homo Sapiens
RRAGDras-related GTP-binding protein D Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
68.59 70.16 120.16 118.14 22.95 18.14 46.77 48.39 68.42 59.53 56.01 41.02 37.84 38.62 53.19 58.78 50.13 50.63 30.43 47.98 41.41 39.89 45.12 48.07 48.62 56.37 48.29 48.98 65.09 52.92