TCONS_00017150-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017150-protein
Unique NameTCONS_00017150-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length326

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017150-protein ID=TCONS_00017150-protein|Name=TCONS_00017150-protein|organism=Clytia hemisphaerica|type=polypeptide|length=326bp
MGLRRSGKSSILKVVFHKMSPNETLFLESTNKIVKDDISNSSFVQFRIWD
FPGQIDFFGHDFDSDQIFSGCGSLVFVIDAQDDYMDALTKLHQTVTRAYK
VNPNIKFEVFIHKVDGLTDDHKIDTQRDIHQRATGELEDAGLENLQLSFY
LTSIYDHSVFEAFSKVVQKLIVQLPTLENLLNILIQHSAIEKAFLFDVVS
KIYIATDSAPVDMQSYELCCDMIDVVIDVSCIYGLNESGDPNAYDTETAS
VIRLNNSTVCYLREVNRFLALVCILREDNFSKHGLIDYNFHCFRQAIQEV
FDLRQQAREQGIRDSSSRPKGESLVV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009599XLOC_009599Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017150TCONS_00017150Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006762Gtr1_RagA
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..173
e-value: 1.5E-20
score: 72.9
NoneNo IPR availableCDDcd11385RagC_likecoord: 1..171
e-value: 2.89382E-114
score: 330.338
IPR006762Gtr1/RagA G proteinPFAMPF04670Gtr1_RagAcoord: 1..223
e-value: 5.1E-69
score: 232.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..171

Blast
[Close]
BLAST of TCONS_00017150-protein vs. Swiss-Prot (Human)
Match: RRAGC (Ras-related GTP-binding protein C OS=Homo sapiens GN=RRAGC PE=1 SV=1)

HSP 1 Score: 506.138 bits (1302), Expect = 0.000e+0
Identity = 244/322 (75.78%), Postives = 279/322 (86.65%), Query Frame = 0 
Query:    1 MGLRRSGKSSILKVVFHKMSPNETLFLESTNKIVKDDISNSSFVQFRIWDFPGQIDFFGHDFDSDQIFSGCGSLVFVIDAQDDYMDALTKLHQTVTRAYKVNPNIKFEVFIHKVDGLTDDHKIDTQRDIHQRATGELEDAGLENLQLSFYLTSIYDHSVFEAFSKVVQKLIVQLPTLENLLNILIQHSAIEKAFLFDVVSKIYIATDSAPVDMQSYELCCDMIDVVIDVSCIYGLNESGDPNAYDTETASVIRLNNSTVCYLREVNRFLALVCILREDNFSKHGLIDYNFHCFRQAIQEVFDLRQQA-REQGIRDSSSRPKG 321
            MGLRRSGKSSI KVVFHKMSPNETLFLESTNKI KDDISNSSFV F+IWDFPGQ+DFF   FD + IF G G+L++VIDAQDDYM+ALT+LH TV++AYKVNP++ FEVFIHKVDGL+DDHKI+TQRDIHQRA  +L DAGLE L LSFYLTSIYDHS+FEAFSKVVQKLI QLPTLENLLNI I +S IEKAFLFDVVSKIYIATDS+PVDMQSYELCCDMIDVVIDVSCIYGL E G  +AYD E+ ++I+LNN+TV YL+EV +FLALVCILRE++F + GLIDYNFHCFR+AI EVF++   + R  G + S+S  K 
Sbjct:   67 MGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQMDFFDPTFDYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYGLKEDGSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCILREESFERKGLIDYNFHCFRKAIHEVFEVGVTSHRSCGHQTSASSLKA 388
The following BLAST results are available for this feature:
BLAST of TCONS_00017150-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RRAGC0.000e+075.78Ras-related GTP-binding protein C OS=Homo sapiens ... [more]
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