XLOC_009348 (gene) - C. hemisphaerica

Overview
NameXLOC_009348
Unique NameXLOC_009348
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000248:149157..160946+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009348 ID=XLOC_009348|Name=XLOC_009348|organism=Clytia hemisphaerica|type=gene|length=11790bp|location=Sequence derived from alignment at sc0000248:149157..160946+ (Clytia hemisphaerica)
aaacAAAGAACTGAATTACCATTTAGCAtaattagtgaaaaaattataaG CCGCATTGCTACCAatgtttcttcaatttttcaaaactggGGAATTAACG CTGAAAACTATactaaatatttcaatttgaaatgaCAGGTAAAGTATGTT CCAGTAGGAGTCTGTTCATTTTTCATGAAGGTAAAAGACATACagccaac tctctctaattctaATTTTTCTGTAATTCCAGCTAAAACATTGATCCCCT TAATTGGAGATTAGTTTAAAAtgctctctttaattcgaattcttctctaa ttcgaagaaaaggtTATAATATGATATAAAATAGTTATAGTTATCTCTTT Aagatcgaattacagagaggcaactgtaatagacgatatcggctttgccg aattctccccgaatgattgcccatgatgcattgcgcaaaaaaattcacgg acgataaccctaaccctaacaatgcatcatgggtaatcattcggggagaa ttcggaaagccgatatcgtctatttaaAGAAATAGGACGTTGGAAAGGTA ATTTTAAGCAAATATTATTTCCCTCAAGTGCAATGTATAAAAAGTGAAGA CTGTCATTTGTTTGGAACAGCTTTTATTTATTACCTTTGACTAGTCCAAA TACAAGAAATAGAAGATTAGACTTATTGATCTTTCTGACCATTGCCCATG CGCATAAGCCTTAAGTttaaatttgtgtttctctTTCAAGCACAAAACTC ATATAAAGGTTTccacatacacgtttttataagaacatccaaagattttt aaaccttcagatgttcttaacatgttcttaatttcaccattttgtgagta ttttgatccattttcctaagaaattgggtctgcaaagccttaaaatattc ttaacttattcttaaaattgaggctatcgaagccttgtgttcatatagtt tgttcttataaaaaagaaaacttgtaTATGCCACTCGTTACAATAGGATG AAGATACAATCGACATTGATTCCATTAATTGTGGTGATTCCTTTAATGTC ATGCTTCGTTTTCAAAGGTAAATATCTTGCATTCATTGAAAAACCCtggt gtcacagacccgctgggaccccactggaaaatttggcagaaattcCGTcc tggtgggaaaataccctgataTTTCAACCCCGCTGGGATATTGATTTTAG CCCAttagaaattcaatgtttaaacattgcactccaaaaccatcactgga ttttttaaccttggaacaataaaatttcccattgggattttgataggagt ttttgtccccactaaagaaaaaagttccaccggggctgtgagacagggtg taTTGAAAATACGCTGAATTAAAATATGTAGTTGAGTAGCAAAGTCCAGG GTTACTAGGGTTAGTTACTAGTCCCTTACTAGTTAATAGTTACTTTTGAA CCTCGGACCTcggaaattttgtgaattttacgatccttattgggactaat ctgaccaaatttcttttcaggagaaaaattgaaattttcctattttccca ACCCTATGTGggtctgaaatttgatttttccaacccttagtgggactttg gaaggaaagtccaaaaaaggtacccttaagggtggcacatacccgtaccc cCTGTATGAATTTGGGGTTGATTGAAATAATGCAATCTTAATAAGGCTTT GTTTGTAACGActgaaaaaagttgaatatttctaaatttaatgaaaaatc caATTATAGGACTTATATTTgcacaaatttggaaaaattgaggaaaattt gattgataaattaatttgaaaattgaaatacgGAGAAATTGGttagttga aaaatcaaacttaggaaaaattgaaaattatactACCTACTTGAAATTTG GCTAAGATGACaaattaaacttaaaaataGCTTAGAAAATtgcatgaaaa atgaaattgtgcATACCAGATAGACTAGGGTAAATGTTGTTTAAAGCATT CATTGATCTTGACAATGTacgaaatcaaaatcaaagtaaaCCAAAAAATT TGTAAATCAAATTCATCTCTCAAAGTTGTTTCAACGCTCTCTTGTTAACG ACAATGTTTAttctaattaaaaatttgagtGAGTGACGAGAGAAAATGCT GAGGTGCATATActcgagtgacttagggcaagtctcaaaaacctagCAGT TTACCCTAAGTTCTCTGAATCTGACTGCTATTGGTAGCGACAATAGCAGT CAGATTCAGAGATCTacttagggctctaaagtacctctataccttaaggt ttcagggcccggttgttacgtaattaaatattaacctaaaaattaattat taaagaaattgtaatcgtgacatcataatttgatcgaatttggtgacgtc atgaatcgtataatcgctataatataaaaaatacatgtcaaatctttccc aaatttgaaccaaagatgcatctaactgaaatgtagctttttgaaaaaaa ttttttggaaaattttgatgacgtcagcaaaaaatagcatttttcgattt tttgtattttttgctgacgtcatcaaaatcttcacaaaatttttcattgt GATCAAAGAAAAGTTCGGCACCATTAAGATGcgtctttggtccaaatttg acaaagatttgacatgtgcttatagagttagagctaatttacgatttatg acgtcataatttgatgacgtcacaattcaaactttctttaataattaatt tttaggttaatatttaattacgtaacaccgggtcctgaaactttaaggta taggtcatctaaaaatccataagtgaacccctgagaatgggtgctattgg tagcggattcgggatttgtgatttttttaaatctagacacgccctaactc acccgagtAGCTGAAGTAGAAACAAGTCCCTAAAGGACGCGTAAAAATAA TTCTGATCATAATTAcctattataaaaaaacaattatgcTTGATTTTTCT TGACATCAAGGCAGAGGAGTTCTCTCATAGGGACTAAAGGATGAATCCTT ACATTCCCCGGAGCATAACTAGAAAACCTTcatcaaaattgaaacatgAT GAGTTAGTGTAAATGTCCGCAATATATTTAGTATCGGAGCGATAGATTTT TGGGACCTGGTCTGGGATCTAAAGAAATTGGAAATCGATATTATAGTATT TATTGCACCCATTTCTTTTCTGTAGACTACGAGGACGATTACCCATTGAA TGTGATTACAGTATGGGGACAGAATTACGCGTCCAAGAAGATTGGTGTTC GAGAACCAGAGCTTGAAACACTGTGCACCAATTCCCcctatgacgtcatc attattgGATATGTCACCAGATTTTTTGATACTATTAATTCACATAGtaa gaaataaatttttattgacaTAACCCTCTAAACAGAAAGGTTTCTTTTTG TAAAGATCTGTGATTCAGacaattttttggtttttcgaaaaaggAAATTA TCATTCATTTCTGAGCACCAGAAAACCAATTTAGGTAGAAatcgaatttt ttttccgtcTGCACAAAATAGTTACGCCTCATTTGGCACTGTATTTttta taccctgagtatcagaggttaagttttcaaagaaaatagtaacctctgaa gacaaataatagaaattttatcgcgcatgtgtcaatctaatcactgcNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcg tcatggttacttttgtcttcgttgattgtgcgatgaatagaatctcgatt cgtcggcacagcgtaaatatatgattttgagctgtgcttttcacggtata ttttttactttgcaaATGATAGCGGACCCTCCTCCATTTTTTCTTGTTCA TGTTATTATTTCCTTCTTTCTCTCTCTCTTGTCTATCACAGCTCAATACC CAGGAATGGACTTTTCAATTCActgtaaataaattttggttttaaaaatg aaaataagtaaTTTGCGACCTTTGGCACTATATTTCTGACCCCTCCACAG CCGAGGGCcctgttgatatttttctttctatcacTTCTTTATTCTTTCTC TattctttctctctctcttGTCTATCACAGCTCAATACCCAGGGATGGAC TTTTCAATTCActgtaaataaattttggttttaaaaatgaaaataagtaa TTTGCGGCCTTTGGCACTATATTTCTGACCCCTCCACAGCCGAGGGCcct gttgatatttttctttctatcacTTCTTTATTCTTTCTCTattctttctc tctctcttGTCTATCACAGCTCAATACCCAGGGATGGACTTTTCAATTCA ctgtaaataaattttggttttaaaaatgaaaataagtaaTTTGCGGCCTT TGGCACTATATTTCTGACCCCTCCACAGCCGAGGGCcctgttgatatttt tctttctatcacTTCTTTATTCTTTCTCTattctttctctctctcttGTC TATCACAGCTCAATACCCAGGGATGGACTTTTCAATTCActgtaaataaa ttttggttttaaaaatgaaaataagtaaTTTGCGGCCTTTGGCACTATAT TTCTGACCCCTCCACAGCCGAGGGCcctgttgatatttttctttctatca cTTCTTTATTCTTTCTCTattctttctctctctcttGTCTATCACAGCTC AATACCCAGGGATGGACTTTTCAATTCActgtaaataaattttggtttta aaaatgaaaataagtaaTTTGCGGCCTTTGGCACTATATTTCTGACCCCT CCACAGCCGAGGGCcctgttgatatttttctttctatcacTTCTTTATTC TTTCTCTattctttctctctctcttGTCTATCACAGCTCAATACCCAGGG ATGGACTTTTCAATTCActgtaaataaattttggttttaaaaatgaaaat aagtaaTTTGCGGCCTTTGGCACTATATTTCTGACCCCTCCACAGCCGAG GGCcctgttgatatttttctttctatcacTTCTTTATTCTTTCTCTattc tttctctctctcttGTCTATCACAGCTCAATACCCAGGGATGGACTTTTC AATTCActgtaaataaattttggttttaaaaatgaaaataagtaaTTTGC GGCCTTTGGCACTATATTTCTGACCCCTCCACAGCCGAGGGCcctgttga tatttttctttctatcacTTCTTTATTCTTTCTCTattctttctctctct cttGTCTATCACAGCTCAATACCCAGGGATGGACTTTTCAATTCActgta aataaattttggttttaaaaatgaaaataagtaaTTTGCGGCCTTTGGCA CTATATTTCTGACCCCTCCACAGCCGAGGGCcctgttgatatttttcttt ctatcacTTCTTTATTCTTTCTCTattctttctctctctcttGTCTATCA CAGCTCAATACCCAGGGATGGACTTTTCAATTCActgtaaataaattttg gttttaaaaatgaaaataagtaaTTTGCGGCCTTTGGCACTATATTTCTG ACCCCTCCACAGCCGAGGGCcctgttgatatttttctttctatcacTTCT TTATTCTTTCTCTattctttctctctctcttGTCTATCACAGCTCAATAC CCAGGGATGGACTTTTCAATTCActgtaaataaattttggttttaaaaat gaaaataagtaaTTTGCGGCCTTTGGCACTATATTTCTGACCCCTCCACA GCCGAGGGCcctgttgatatttttctttctatcacTTCTTTATTCTTTCT CTattctttctctctctcttGTCTATCACAGCTCAATACCCAGGGATGGA CTTTTCAATTCActgtaaataaattttggttttaaaaatgaaaataagta aTTTGCGGCCTTTGGCACTATATTTCTGACCCCTCCACAGCCGAGGGCcc tgttgatatttttctttctatcacTTCTTTATTCTTTCTCTattctttct ctctctcttGTCTATCACAGCTCAATACCCAGGGATGGACTTTTCAATTC ACTGTGATACCTCTAACACAATGAATGGTATACAATGTCCTGACATTCAA AATGCTATTGAAACATGTCACCGAAACAGAAAGAAAGTCATTCTTGGAAT TGGTGGTGCAAACGCTTTAGAGGAGTTTACAACCTTCACTGATGGTATTC AGGCTAAACGATTCGCATCGAATGTTTGGAATTTATTTCTTGGTGGACAA ACAGACGCATCCATTCGACCATTTGGAAAGTAAGTCATTGCTGACATTGT CTCTTATACTAAGCAGCTAttggtcaatttttgaaatatgaagcGTCCGT GGAAGttatatattcgaaaatattggacagcaaagaagccaatgaAATGT CGgtatttacgcgcgtcggataataaaCCCTCTTATGTACCAATATCTCT GTGACCCAGTGAGAGTTGTGTGCACCTAAATATGAGCTAAATGTCGATCA ATATTCTCTTGTGTTTTATTGAGTGTATGTGGCTTAATTTTGGTGTGGTA TTCTGCTGTGGTTTTCTGACGGGGAAGAAATTTTATGATAATTCATCATT GATCAGTTTACCAGTGGGCCCTCTACTCATTGCGGGTCTATTGGTTGTAA AACATTTGCCACATATGAACTTTGTCCCACATAAAATGCCCTAGCCCGGA AAAACATCCGaaccttttaaaattttccacccgaGGCTTGAACTGGAAAA CCCTGGGTTGTTTAGTATTGACCATCATTAATTCATCGTTTCTTTCAATT TCTATTTTAGCGAAGTGCTAGACGGTATCAACATCGAACTTGGTCACGGA CAGTCGCAATATATGAACGTTTTTATGCAACGTCTCCACGAATTTCGTAC AGCACAAGCGCAAGTTCAAGACACTTTAATCACTTTCTCGTCAAAATGCA GTTACCCGGATGCATATCTTGGTCCTGATCCTGGAAAACCTTTAAGTGAT GCTTTAGCTACTGAACTTATCGACCAGGTGAAATTTCTTTTTACCAATAT TAATAATATaccaatttttgtctccactgaaaataataaaataaacaaat cctNTCAATATTAATAATATTccaatttttgtctccgctgaaagtaatca aataaacaaatccttactgcaaaatattatgttctttttcttattcccac tgaattttctgacttggaATTCGAATCCCGAACCATAAAAACAAGAGAAT CAATCCACactgagtttcagtccgttatttttaccaaaCTGACTAAATTA ATCTTACCGGATCTGTGAGAAAGAATCCAGTATACGCAAAAATATGTCTA ACTTGTACTCCGATTTCTAGATTTATGTCCACTTTACCCAATCAGCGTGT TGTGTTATTGGAAGCCCTGGGTTCACAGCATCCATGCAGAAATGGAACAT GTTGTCAGCAAAGACTAAAACAGATTTAGCCCTGGGTTTTGCATCTAGTA GATATGcggttgaaaacaaaaattgctTTAATTCTGGCAACCGAGTTGCA GAAGCAATTAAGGTAATCGATTATTCTAGCTGTTCTCTTTTCATATACTT TATTGAATAGGCCATTATTCACAGTCTAAATGAATCNGATTCTAGCTGTT CTCTTTTCATATGATTTATTGAATAGGCCATTATTCACAGTCTAAATGAA TCATAGGTAATCAGGACTGGTTGTGCTCTATAGAAATGACTGccggttgg ctagacgcaaaaatcttcaaaatttttcaaaactttggaccaataataGT Aagatagtaagtcgtcattagcgcacagtagtcctgattacccattacgc tttgtgACTGTAAAATGGTCTAtataaatgggcttttccaatAAATTTCA AGATATCGGTTTACATAAGTTGACACAACAGTTTGACAAAAGTATTCCCA TACGacatttatttcaaaatctgaaaaaaacgaaagtggtcctTCCTACT GAGTATCGTTGTTCTAGAAGTAAACAATTTTGTAAAAACCTTTTTGATTA AAGGTTTTGAGCATATAAACGACGATGAATATATTGGATGAAATCTTTCC TAATATTTGGAACTAATAAGAAATAGACCCTTAGTAAGACTGAATTTCAC AAgaaagtgcattttttgtatGATTATGATATTCTCTATAATTATCATTA CAAACAGCCTTGGCAGCAACGAAACCCTTACTTAAACGGTGTGGAAATCA TTGATAATTCATTCGATATCCACAACAGACGAAGATATACATTCACTCAA AGCATTAAGACATATTACAGAGCACCTGAACCACAGCCGCTTCCGGAAAT CCGCCCAACACCACCTATACAAATACAACAACCACCACAACCTGCACTTC CGTCTACCCCTTATCAGCAACAGTCTCCAACCTACCAGCAGCATGCTCCC GTCTACCAGCAACAGATGCCTACCTATCAGCAGCCAGCTCCAATCTACCA ACAGCCTGCTCCAGTCATTCAACCAATAGTGAGCATCCCAGTGACCCCAC TTCCTCCAACAGATCCCCCTGAGGAGGAGGAAGAAGTAGTGGAGGAAGAG CCCCCTATCGACCCACGACCTGATCTTGTTGCTACCACTCTACCACCTGA AGTAGTACAACCGGAGCCTGATACTGAAACTGTTGATACAGAAGTGATTG ATCATGAATTACCTTCACCTGTAGCCAACGAAACAGACAATTTGATCATA GGTATCTGAATGTGATTTTTATTGATGTTTAGAATTTTGATGCTTTAAAG GAgtgacagtttgaaaaaaaggtcAAGGAACCTAAAGAGCTTTTTGATTG ATGAGAAGATTAGCCCTGCAGCTTTCTGGATTTTTATCTCCTGTATAAGG TGATTCTgataaattttggcgaaatattgacgtcaattttaagtaggcgt agtggtatagtggttatcatccttgactcccGCCTGGGAGGCCCTAAATC GATGCCCAACCtgtctctacgattcacttggcaactGAATATACCTTCGT CCGgatcaacccatgccatgtgaggggaattgggtacctttactctgata caagaatGTGGGTAGATTAGATAGATATTGTGAAGTGCcgtggcactcat aaggttcggcctCGCGCGAGCATtgctctcccagtgtcgttcgagtgtca tggtatacgccatggcttagcagctcgcgtctgtcaagtcgcagtgtctg tcagcgccgtgattcctactccttcgtgATTAGGACCCgtcccgaatgca ttcggagggctcatatctatctatctattctACTTTTTTAAGTTATCGCA TGACAGTTTTCTAAAGAATTCAAGTGTTGGACTAGTATAGGTTACAGCTA ATTAGGCTTTAACTTACAGCATTGAGAATATATAGtacttttatgttcaa tttttagATAGTTCAACTGAGGGAAAGATTGGTCACGAAGAAGAACAGGA AGAAACAGTTGACGAGAAAATTGAAAAGGAGCATGAAGAGGTAGAGAAAG AGCATGAGAGAATTGAAGAAGAGCATCTTGAAAAGGAGGAAGAAGAGCCC GTTGTTCTTGAGCCTGTAGGTCCTGAAGAAGAGGAAGAGGTATTGGTCTC GACCCGACCCCCTGCTACTAGGGCACCACCCCTTAACCCTGATTTAGCAG CAGGACGCATACCACCGAACTGGGattttgcacaagctgctgaaATTCAA AAGAAGAAGAGAGCTCATTGTAAAGGCAATTTTTCTAATGGAAGATGGCA ATTAAAATGTGCAACTTCACGTGTTTATCACCCGCCTCCTCCGTCCCCAG TGAATAAAAAGAAGGGTGTTAAAATCACGTTTAAGGGACCATTCAAGCCT GGATACATACCAAACACAAAGGCTCACCATAACAAACATCGtaaaaagaa aacgaagaagGCAAAACATTCGACGAAATCGAAAAAACATCTCAATGCAA AACGTGTGAAACTACATAAACATGTTCAGAaacttaaacataaaaaaact cAGAGGAAGATTGAACCTAAGGAGACATTCAAACCAAGTTACATTCctaa aacacaacaaaaaagaaagaagaaacatCATCGACGAcatagaaaacaaa agattcgACATAATCTCCAACATGCTAAACACCATATCAAGAAATTCCGA AAACGAAAACATGACCGAAAGAACAGAAAGACTTTGAGAAAAGATGAAAA ATCATCCTTCAAACCGAAATATATTCCGGTTACTAAAGAAAACAAGGAAT TTTTTAGAGGACTTTGAAGTCTTTGAATACTGAAAGGTAAGGCTGGTGTG CATATTGTTTGTGACAATGCAGTTTGATGCATAATATTGTTAAAGACAAT GAAATGAAGCTATAAAATAgaacaaataaaatttaaaattgtcgaggact tattttggcgagagagctaaatttttgaattatattttatGTGAATTTGG GCTAGATTGGCGACGCCACATATACCGTTACTACATAAACGGAGCCCAGA TTGTAGATATCCACAACGGTTATAACCAATTTGAAGGAAGAACCACACAA AATcgatgaataatttttttttccggtaaaaaataatttgaaaaattgat cattaaGTAAGGGTCATTTTCGTATTGTAAATAGATTTCTTTTGTAATTT GATTGCTGAAATATATACAGCCTTTAGCCTTTTATTTCATTTGCGATCTT ACACAATCTTGACCAATTAAATGTTTATTCGAGATAAGTAATTCAGTATA CAGCCTTACGTACTAATTGTTTCAAAATCATTATTAATGATACCCAACCA ATGTCATTGTTTCAATTATCCATTCTTTTAGATAATGAACACTGGCATAC ACAGTGTACTCATTCTCATTGGCTCCACATGATCTTGATCCCCAACTCAT TACACCTTGTAATTCCCAATGTTTGCCATCATAACAAACAAAAGGGCTTC CACTATCACCATGACAGCCACTCATTCGTGTATTTTGCAGACCGGCTGAA CATAAACTATATTGACCAACTGAGAGGGGTGCGATCATCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016719TCONS_00016719Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016719-proteinTCONS_00016719-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000248supercontigsc0000248:149157..160946 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04 0 0.04 0.03 0.65 0.59 11.96 13.18 3.48 3.63 3.4 2.14 5.1 4.31 2.95 8.13 4.3 3.86 0.06 0.08 1.82 2.39 1.13 1.19 1.49 2.12 0.31 0.05 0 0.03