XLOC_009233 (gene) - C. hemisphaerica

Overview
NameXLOC_009233
Unique NameXLOC_009233
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000241:66181..72242+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009233 ID=XLOC_009233|Name=XLOC_009233|organism=Clytia hemisphaerica|type=gene|length=6062bp|location=Sequence derived from alignment at sc0000241:66181..72242+ (Clytia hemisphaerica)
TGATGCTCTTGAATAGCTTGTTGATGAtcattaaattttgagtttgatga aaaattgaaagaaacatAGTCATCGTTTTTTGACATCAGAAGACTTTGGA TAAGTTTCAGTTTATACACTTTTAGAgtctttatttttataattttagtg agaattgaaatcattctacAAGCCTTTGGAGACTTTCGGAACTTGTAATG AAGAGATGGAGTCTtttattttggatattttgtcaaattcaaggtagttt ccttttattttgttgttgtttgataGGATTTGAcaaattgttttaaataa ttattttaatttaaGTATCTTTTAAACTGAAGATTGTCATCATGTATTGC ATGCACTGACggggcactgacctttatatatccctggaccaagcaatatc cacaatctttgatcggagtatATAAAGGTCAACTTTTAATATGAAGTATG AAGTTTATTATTTAACTCGTTTTCTTTACACAAACTAATAAACCAACAGT TTGCCATAAATTTAACATCATCTTTTTATTTCTAGGTGCATTTCAAACGC CAGTTTCAAGGCCTAGGTAAGTATAGCATCCATTAATGGGAGAAATttct tctgaaaaaaaaattcttctaaAATGAGCATTCGAAGAGTCcatttttct cttaatacaaTATGATAGTTTTTTAGTTGTTGGAATGATACGAAAAATTA GATACATACGCAGATAGGCAAAAAGGGGATTTGCTGAGGTATAAGAAAAT GATGTCATGAAATACAATCTTTTGATAAAAGAGGGGTGCGAATAAATGTT TAGCACCATCTTAAAAACGAACTAAAAGAGTGATCACGTATAAAATTCGA AACCTGAAACATTCAACTTTGGATATTCTACTAGTCTCCGTACTTAAATA CGTAATCTCTCTCGACAGATCAATCACAATCGAATCCTCACAATCGACAT TAAACTCCATCAGTAGAATCCAACTGATTAGAAGTACCTCATCACCAGTC AAAACAACTGCTCAATTAAACTCTACCAAGAGATGCAATGACAAAACTTG TCAGCAATTTCATCAAAGTCCAACTTGCTCTCGTGTTCTTGGTCTGACCA ATCAGACGACAGTGAAACGAGACTGTCGCTATGGTAACAATGAATTGGAA TACCATATCTCACGGATTATTCGACTCGTGGATAAAGATAGAAGTATAGA TGGTGCTTGCAGAAATCTAACTCATTGGTATGCTTGGATCCTTTTTAAGA AAAGGAGACAACCCGAAGGGTACCCTTTCGATATAGCTACCTATCTGAAT TTAGGGGAGGGTACCACTCTTTCTCCGTGGGTAACTccatttacccttga tccttctcatTAATTGCTGAGCGTCAGGCAGAGAAACATGAAGTACCATT TTTTAActggtacatgtttttttttataagcataacgcttataagcatat gaaggctcagatttgcagaattcctaagcataacatgagcatatatgtca ggctaaaatatttttcaagtggtcatttttatctgtttaaaagggtttgg tagaggtcaagtaaaaaataagacatttcaCGGCTAGCTAACATTCCACT Gcttccaaaatctgaacaaatttttacaaaatttctgaaatttcattaaa aacttggctcggggtgaatcataagcatgttcttaagcatataataagca taaaccatgcctggatgctttgagaacttaagcatgcacgagcctgacca aggggcatacacttgcttataaaaaaaaacatgtactggTATGACCGTTt gcacacccctgtctcggagccccggtggaacttttttcctcaatggggac aaaaatttatattgaaattctagtggggatataaattctattgttctaaa gttaaaaaatcatattgggatggttttagagtgtcatttaaaaaaattga atttcgaatggggatgaaatcaaagtaaatttgAGTAGAGCtgaattcca gggtattttcccaacggggacgaaatttttgccaaattttccagtggggc ccagtggggctggggtcccagtgggtctgtgacacaacaGGGGTGTGTTT GCTACCGTAACCGAACCTTCTACCTTTGCACTATCTGATTATCATAATCC CAGGACTGCTGTTTCAAAAATATAAACTAAATAATCTTTTTTGTAGGTTT CTATGCAGCCTTGTCTTTCCATCATGCAAtgttcaaaatggtagcttgTT ACCATGTCAAGAAACATGTAACCAAGTGAATGATTGTTATAGCAACATCA AAGAAGTCATTCTTACTCACGATCGAACTTTTTATGAACATCTGAGAACT GATTGTCTTTTACTTGGAAAACAAAAAGATGGAAAATGTGCTTTTAAAGC TCTGCGTATGCTACCTTTTTATTTCATCCCTTACTGATAACTTCCTATGA ACTTGATCAAAACCTCAGAAAACATTTTGCTTTTTTGTTATAATTGTTCA AATTGCAAATACTTTTTAACGTTTAGCTAGAAAATAATAGTATGATACTA TTTTTTATGTAAGAACCAAATTTAAATCGACATAAACAGACAAAAGGTTT TACTCAGGATCAGAAAGTATCCCTGAGCCTGCCAACCATCTtgaattctt attttttgcttgtACTCTCTTCGCTGTGTATATTCTATTCTCACAGCTCA ATTATTTAGGACAATCTTCTAGATTTTAGCATGATATcgtcttttttctt tagaacGACAAATGAATACAAAACCAGCACCCTTCAAATTCGTAACACTC ATCGTAATCGGGACAGTTATTTGGGTTGTCCTCATATTTCTCGTCATCTT GTTTATCATATATCGGAGGCGCCACAATAACGCTTTTTCTAGAACACTAT CACTCCACGAAGTGAAAAATGTCCATTCAAATCGTACAGTCCAAGTTAAC GATAATTTCGAAAACCTTGGCATCACGAATCCTAAATATGAAAGCGTTAT CAGTTTGGTGACCACACTTGGTTTGACTGTCTTTTCTAAGGAGAATTTGG TTTTTGATCGGAATCTTGGAGAAGGTGCTTTTGGAAAAGTATGTATATCA TGGTTGACAGTCCTGCCTTAATGGCCTTAATGCTTTTAATAAATTTGCAA CAAGCCATATTTTGAATTAGAAatttagatgttttttttcaaagagcACT TCTTCTTAGGGAAAGCAATTCTGGAATTTATGTTGTTCTTCTTGTCTTGA CATTTTTTAAAGGGTAGTTATTAAGTGTCTTAAATCACATGCATATTTCA ATCTTCAGGTAGTAAAGTGTCGCACCAAGAGCATTGATCATCCAAAACTC GGTACTGTAGAAATGGTGGCCGTCAAATATCTTAAAGAAAACGCGGAAGC TGAGATGGAGCTGACCTTTCAAAGAGAACTAGAAATATTGTCCAATTTTG ATCACCCCAATGTTATACCTCTTGTTGGTGTTTGTCTCGATAAGTCAGGA CCTATGTGTTTGATATTGGGTAAGCATGCACTAAAAACGTAACAAGGGGT TCAGCCCATTGACTNTCAGGACCTATGTGTTTGATATTGGGTAAGCATGC ACTAAAAACGTAACAAGGAGTTCAGCCCATTGACTttcaagcccgaaagg ctagactCATTTTCCTGGATGGAAAATggagctacttatttcccatgcAG AACGCCCACGcttggtttttacacaaacgctggattgaaaataaaatcta tcgctagatttcgaaaaaaaagtagtcttcaaaaacaaaggaaccacttg atacaatccgtcgtcattaatgcggcgcgttctaggcgcgttctggatga gaaaaaagtggcttcactttttcttgcataTGCGAAAGAtaagagattct actctagcccttcaggctttaaactcaatggttcagCCCTTTTGGAATGA GAGTTTTCAGGAAAAACGCTTCAAACCATCATATTCTAAAAATATGAGTG CATGAGTGAAACGttgagcaaaaatattttactttttaaagtACATTTTT TCGTCTGGAATAAGTTAGCATAAGTTAATTTTTCAGACGGTTCCGAGTGT AGTTGCAGGATACATACATTACCAACCAAATGATAAACGTATAAGAATTT CTTAGGATAACAGGTCATCTGTTTCTGGGTACCAATGTTTCGTTTCCTGG TTTCTTCTAAAAGTAGCCTATCAACATAtcatccttttgtattttccaGA ATTCATGAAGTATGGTGATTTAAACCAATACATTCGATTGAGGTCCGGAT CTTTTCATGCGGTCGCCGGAAGTTGCGGAGATCTCCCGGACGGTGTTGAA TTCCAATCACCTGAGCTTTCATACCACAACCTTCTGAGTATCACAAGTCA GATTGCTGATGGGGTAAGTTACCTGGCATCAAAGCGATTTGTCCATCGTG ATATCGCTACGCGGAATATCTTGGTTGGTGAAAATCTGAAAGTGAAAATA TCGGATTTTGGTTTGGCGCATGACATCTATGGATCGGATTATTACAGGTT GGatattatttcttattttagTTCGGTCTTACCAAGGAGGTCtcttctaa aattcgaatgttCTTCGATNTTTTATGTCTTATTTTAGTTCGGTCTTACC AAGGAGGTCtcttctaaaattcgaatgttCTTCGATTTCTCAGGTTCTCG AGATACTAGCGTACTACATATATAACTGGAACGAATAATGATTCACCCCC TTAACAATCCTGTTATGAAAAACTACTTAAGTAGAAGCCCTGCACTTTAG GTATTTCATTTGGGTTGTCCTCTTTACATTTTCAACTTTACCAAGATTTT AGTTCTTTCCGAGCATCCAATGAAATGAATCTCCCAACAACTTCTACATT ATATCTTAGAGTGAGTTCACAGAAATTATTACCATTGAGATGGCTTTCAC CAGAAGCGTTGAGTCTTGGCAAGTTTACTGTGTATTCTGATACCTTCGCA TTCGGTGTGACCATGTGGGAGATCTTCACTTATGGTATGCAACCGTATTA TGGATTGAACAATGAAGAGGTATTGAAATTAAGTGACTTTGTAAATTGTC TCCTTTTTACCATAGACCTATTTTTAATACAAGCAGTAATGATATTGTCG CATAAAGGCCTAATGATCGATCATCATCATGGATTTGATACAATTCTAAT GAAGTGTACGCTTATAGTCCCTGATGTTGGGAATTATTGATTGGAGCAAA GGCAAGTGTTTTCTAACGGCAAACACTGAAAATcctttgctgtttttaat ggAAACTGCTTCGTTATTCCAGCGATTTCCTTGTATGAATTTATGAGATA TTTTAAGTTTCAATTACATTTCTTTGGATCTTTTAGGTTTGTAATATGAT TCGTGGACACAAATTATTGGAACGCCCTTACTGCTGTCCGCCCAATATAT ACGCCCTTATGAAGTCATGTTGGAAGTTTGAACCACGTCATCGAAAAGAC TTGGTATTTATCCGAGATACAATCGACTCTTGGCTTGAAGCGGATGAAAC TTTCATAAGGGAGTCATGGAAACGGTTGATGCTTCCACCGCTGTCAGAGC GACGACCTACCatcttgaaatcgaaaaaattcaACAGACTGATCAAAAGA GATATTACTctgtaaaatgaaattttctgtcaGATATACTTTCCATTTTG CATGCCATCTTTTCAGGAATAATTGAAAGTGTCTTAGAAACTCTGCTgcc gattttttttccgtataccatAACATAACgacataccgccatattttcct gTCTTTACTGTAACAGCGACAATAACATCGTCTAGAATAAGTGTATCTTT ATTGAAAATTACCTTTTTTGTAGTTTTCCCAGTTTGGTCAAACCTCCATT CATGTCCATTATTAGGACATAGTGGATACCCACTGGGATTCCACCAAATC ATATTTTGTACATAGCTGTTTCAGTTCCTCTTTATAGGTTAATTTCTTTA GAatattgtattattttttacCATATTGTACATAAGATGTTCTAACTAAA ATATCAATTCCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016517TCONS_00016517Clytia hemisphaericatranscript
TCONS_00016518TCONS_00016518Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016517-proteinTCONS_00016517-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000241supercontigsc0000241:66181..72242 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.41 0.43 0.21 0.19 0.63 0.48 1.51 1.85 3.03 10.33 4.92 3.96 9.64 8.52 10.02 13.17 2.45 3.57 4.68 3.56 0.82 1.15 0.59 0.65 2.26 3.83 0.19 0.28 5.22 5.66