XLOC_009209 (gene) - C. hemisphaerica

Overview
NameXLOC_009209
Unique NameXLOC_009209
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000240:112952..121577-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009209 ID=XLOC_009209|Name=XLOC_009209|organism=Clytia hemisphaerica|type=gene|length=8626bp|location=Sequence derived from alignment at sc0000240:112952..121577- (Clytia hemisphaerica)
AGATAATACTAAAAAAATAAACAAACGAACATCGAAATGGCTGCTGGTGA GGGTGAGATGCACACTGTAATGGAACCTTTAGATTTGATCAAATTCAGTC TGGATGAGAAAGTATACGTCAAGATGCGCAACGATCGTGAATTGCGCGGT AAATTACACGCGTACGATCAACATTTGAACATGGTGCTGGGTGATGTGGA GGAGACGGTCACCACTGTCGAACTGGATGAAGAAACAATGGAAGAAATTT TCAAGGTATTTCATTTATTCACATAATAATTCATAAGACTATATTGGGCA TTGATGTCAGTTAGAATGTTGGGAAATGGTGAAAAAGGCATTTTCAGATA ATTGATTATGAGATAAATTAGAAATCCGTCTACTCCTGGAACTGATGTGA TGTGAACCATTACAATGAGTTATTCGGTTGTTTCTCGAAGAATTATCTTT CCTCGAAAGTTTTCTTTTCGTCTAAAAAAATGCATTAAATTTGATTACTC GATTTTTTTCTTTCCATGTTTGTCTGAGTTTCAAGGAAAGGATAATTGGC CTTTAATTTCTTTGTTTTTGTGATGAATTTACCTTGCAATGACATCCGTT GGTAACGCGAAAGGATCTTCCTCCTTGCTACGACGAGGCTGCGTTTTAAT TAACTTTTTTCTTTAAAGTAGTGCACATTCGTGAATATTTTCGTTACAAC AATTTCCTCAAACGCTGATAGATTTTCTTCTGTATACTTTATTATATCGG ACTGCGTATTTCGAAATCAGTGGACTTGACTCACTTCAAATATATTTCCC CTGCCAACATACATCTTCTCACGTTTTTGTGTTAGGTGGAAGCAAGTTTA AGGGGCTGTATGGGTCACGAGTTAAGTGATATTTAGGTTGATTTTTATAG AAAAAATTGATACTTTCATTTATTAGTAAAGTAGTAGTTGGCCCGAGGGA GTACTAGTGTTGTGAGCTGGTATGGGTGTGCCGCTTGACTTTCGACTCTC GAACCCTTAGCGGAACTAAACAGGAGGGGGGAGGAAAATTTTGTGACTTT TACTACCCTTTTTGTGACTAATTCAACCAAATTTCTATTTTGTAAAGAAA TCGCGATTGAATGTCGATCACCTCAAAAAAAAACGAACGTACACTGACGA ACTTGACCCCCCCCCCCTTCAGAGATTTGGGGGTACCTAAAAAAAAGTGT TAAAAGAGCCAGGTACCTGGAAGTATTCTTAAATTTAGGGGGTACCTGAT ATGTTTGGGGGTACCTGCATTTTCATTAGTGGGGGTAGGGGCTGTTGTTT TTGTATGAAGTCATCACCCTTGAATTCCTTGAAGCACTTGGAACACCCTT GAAAAGTCAATATTATTTTGGGGACCTTTGAAATGCAAGATTTATACCCT TGAAACCCTTGAAATGCCAAATTTTGTGGCCATTTTTAGCCGTTTTAACT TTCAGAAATACAAAATTTTTCCCATTGCGTGGGATACAAACATCGCAGTG ACTTAAAAATGAGAAAACATACTTTTGGAACCCCTGAGACTCNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAGACTCAAG GGGATATTCCACGCTCATTCTTAGGGGGTTTACCTTTTAACCCGTTAAGT GCCACTGGAATTATATGAGATTGGCAGGGCTGGGGGATAGAATGGGTGGT TGTAAAATTATCAATTATCAGCCAATTTAAGGGCCCTCCTTTACACAAAA ATTGAAAATTCAACCGTTCTCCTTTTGTTGACAGATTTCCTTGAAATCTT TGAAAACTAGCAAAGATCAACTAAAAATCCTTAGAAACCCTTGAAAGTTT GTGGTATATAAAAATCTCTTGAAACCCTGGAAAATTATAGAAAAAAATTA CACCCTTGAATTTGTTGAAAAAGAAGGCCGCCATGGAATTATTTTCCCAG GAATGACAAAAGAGCAAAAAATCCCTTTTTGTATTTTTAACAATAAAAAA ATTAAAAAGGGGGTAACTCAAAGTTGGGGGATTACTTTAGTTAGAATTCT AAAAAAATTTGGGGGTACCAAAATGATTGGGGGTACCTGAATTTTTTGGG TGTACCTGAACCCTGGAGGACCCTATGCCCGTTGTTTATCGTGCTATTTA GACCAATTATGTTCAGCAAAATACAATTATCATTTTGATTACGCATCTAG TTAACTTAAAATTAGTCGGCAAAAACATGTATAATTAATTACATAATTAC AGAATTAATTAGAACTTGATTAATTATACATGCTGATTAATTCAAGCAAT TATTGAAATAAAATCTTTTTCTAAACTCACTTACACAAAACTGAATTACT TTTTGCAAACGTTATTTGAATTTGAATAGATGCGAGCAATGATTAGATTT GATAATTTGACAAATTATTATATCTGACAATTACTGTTAAAAATACTCTA GAATAGCATTCTTAGGTTCAATTTCCTAATCCCATGAATAATATTCTTAA AGTCCTGTTTCAATATAATTTGCAGCGGAGACGAAAAAAACTTTTGATAG AATTCTAATTAGATAGCAGTTCTGTGCTCGTTAAAAGATATTTTGGAGTG GAATATTGTCAAAAAGAAAAAGATTTAAAAAATGGAAAAGTTATGATGAA AAATGAAGAAGAAAATGAACTTCTTATAGAATAATGGGCTCTTCCAGAAA AAAAATTTACATGGGGGGGTGGAGGATATATTGTCCGGGGGTAGCAAAAA AACATCAAAATTTGCCTTGTCCGGCGTGTAAATTTGCTCTGTCCGGGGGT AATTTGGTGTGCCCCGGGGTCAGCAGATGCTTGCCCGGGGGGTAAAACCT ATTGTCCGGGGGGGGCCAAAAGTCACCCTCTCCGGGGGGGGGGGGAAACC GCACCCTCGGGGGGGGGGGGGGAAACCGCACCCTCGGGGGGGGGGGGGGA AACCGCACCCTCGGGGGGGGGGGGGGAAACCGCACCCTCGGGGGGGGGGG GGGAAACCGCACCCTCGGGGGGGGGGGGGGAAACCGCACCCTCGGGGGGG GGGGGGGAAACCGCACCCTCGGGGGGGGGGGGGGAAACCGCACCCTCGGG GGGGGGGGGGGAAACCGCACCCTCGGGGGGGGGGGGGGAAACCGCACCCT CGGGGGGGGGGGGGGAAACCGCACCCTCGGGGGGGGGGGGGGAAACCGCA CCCTCGGGGGGGGGGGGGGAAACCGCACCCTCGGGGGGGGGGGGGGAAAC CGCACCCTCGGGGGGGGGGGGGGAAACCGCACCCTCGGGGGGGGGGGGGG AAACCGCACCCTCGGGGGGGGGGGGGGAAACCGCACCCTCGGGGGGGGGG GGGGAAACCGCACCCTCGGGGGGGGGGGGGGAAACCGCACCCTCGGGGGG GGGGGGGGAAACCGCACCCTCGGGGGGGGGGGGGGAAACCGCACCCTCGG GGGGGGGGGGGGAAACCGCACCCTCGGGGGGGGGGGGGGAAACCGCACCC TCGGGGGGGGGGGGGGAAACCGCACCCTCGGGGGGGGGGGGGGAAACCGC ACCCTCGGGGGGGGGGGGGGAAACCGCACCCTCGGGGGGGGGGGGGGAAA AAACTAAAAAATGTTATATCCTCCATCCCCCATGTAAAAAATTTTTCTGG AAGAGCCCAATGCTATGATCTTCATTTTTATATTAGAAATTTTTTTTTTT AAATCTATAGTATAGGTAGCACGGACAAATATTACAAATCTACAGGTTCC TAGCCTCCCGCAAAAGGACCACAGATCATACCGCCAGGAGGAAGGAAACC CAAATAAGCTAAACAATAAAAACTAACTACATAGGATAATTATTAACAAA ATGAAAAACAAAAAGAGCTAGGAGAGCAAAAGACTAGAATAACGGTCCCC CAAAACTTCCAGTATCCCAGATTAATTTTATTGTTATGCTCAATATATCA TGATTTTGGACAACGCTAAAATCGGGGTCGCCATAAAGAAGTATTCTACA CAGTGTTTTGGGATTAAATGGAAACAAGGTCATGTCAAGTTGAAGAAGGC TGTCGAACATAACAAGTCTGTCATTGGAGTAATCAGAGCAATGCATCAGG AAATGTTGTGTCATTTTGAACAGAATTACTTCGACAGTTGCAGAATGGGT CGATTGTGTCTGCAAAGTTATGTCTAAATTTTTGGTCCCGAAGGTGACTG AAACCAACCCTTAATTGGTTAAGTAGAACCACGCCATCGTTGTCACTAGC CCTGAAAACTGAGTTAGTGCAAGGTCTAAAAAATTTAAGAATCGCTTGTT TGAATAATGAAATAGAGGGAAGACTTTGTATATTTTCGCCCAGGTTATTC CATTCATTGATGCAAAAGGGAAAAATGGAGGCACGGTAACGTTCAGTCCT ACAAAATGGTGCCTCAAATGGTGGTTCTGGGTTGTATCCTCCGCCCTGCC CTACGTTCTTCCTCCCCTCTTTGGGGAGGAAGAACATTTGAAAGATAAGC AGGTGCAAAGCCATTGATTATTTTGTAAAAGTAAATTAGTCTTCGACTTA GTCGCCTGTCCGACAGACTTTCAAGACCTAGCTCAAGATAAGTTTTTTCT CTGGATGTTCCTCTGAAACATCCAGTTATTGCAAGACAAGCATCATATTG AACTGATTCTAGATTTTCAGAAAAAGTGGAATTACCTGGACGATCATACA CGATCTCCACAATCTAGATGTGGCCTAACATGGGTTTTAAATATCGTGAC TAGTGAATCTCTAGGTAGGAATGCACGAAGCCGACGAATAAGCCCAATAC CTTGATCAAGTATGAGACCAAGATGTTTTTGATGATCTTGTCGAGCAATG GCTGCATTGTTAAAATAAATTTCTGGAGCATCAGGTAGATTTATCCTCCG AGTGAAGTACACTTCAACGGCCTGTTTAGAAGGGTCAGGCTTGAAGGTCA TTTTCCATTGATGAGCCCACTCACTAACCTTCTACATGTCACTGTTCAAT TCGTTTTGGACAGCGAATATGATCAAGGATAAGGGAGAATATTGACGAGT CATCAGCAAAAATTTTGATCATGGAAATAATTCCTTCGGGGAGGTCGTTA ATATATATCAGAAAGAATAGTGGTCCTAGAATAGAGCATTGAGGTACACC GGCCAAGACCTCCGTCCAATTGGAAGCTTGGCCTTCAAACCACCCGCTGC AACCTACCTGAGAGAAAATTTTGGAGTAATGAGAGAAGGGGCCCGGACAC ACCATATGACTTAAGTTTGAAAATCAGCCCATTGTGCCAAACTCTGTCAA AAGCTTTGGAAATATCAAGAAATACTCCACGAGTATATAGAGGTGGATTT GAATCGAAACCTACCAGGATGTCGTGCGTTATGGACAAAAGCTGAGACAC ACAAGAGCCACCCTTGCGGAAACCAGACTGGGAATTAGTAAAGAGATTGT TATTTTCAAAATAGGTGTAGACAGAGTCAAAGATGCATTTTTCATAGATT TTACCAAAAATAGGTAGAAGAGACACTGGCCTGTAGTTTTTTTAACACGC TCTTGTCCCCTTTGTTTTTATAGACAGGGACAACTTTTTTTCCAATTCGA TGGAAAAACACAAGAATCTAGGGAAAATTGATAAACTTTCATAAGAGGTT TAACCAAGGATTCATTACAGATCTGAATCATCTGTATGGAGATGTCATCC CAACCATGCGCTTTGTTAGATGTAAGTGCACGTATAAAGGGCTAAAATCT TTGCTTCATCAAGAGCGATATTGTTTATTTCAAGATTCGTAGCAAAGCTT TGTTGTGGCAAAACACTATCAATGTCTATGAGAGAGCACTGATACGCAAA AAAATTGTTAAACATATTTGTTTTTGTTGGAACATCAGCAATAAGATTAT TGCTGGAGTCTCGAACAGGGGGAATCCTTGGCGACTTCCTCTTATGAAGA AATTGATTTAAAATGGGCAAGTATCTTTTCGTTCCCAGATTTGGATCACT TAGATTAGTTGCTAAACGAGAAAAATAAGAATTTTTAGCATCTCTGACTG AAATTCTTAATCTTAGCAACGTCACAAATGCGAAAAAGAAATTCAAAAAA TATTTATTCAGTCTGGTTCATTCAAAAAAAACATAACTTAAAACATTGCC CTGGTTGACTTAAAAAAGGGACCTTTTTTGTTTTTTGATGGTTTTGAAGT CAATCAGTGATAAAACCTTATATTAGAATATATCTTTCAATGGAATAAAT ATATTTTAAAATTTATTCCCATTAATGATGTTCTAAGATCAAAGATTCAC TTTTGTGAAAATGATAATCATAGCACAATTATTTAAGAAGTTGATTTTCT TCTTCTTCATTTTAAATTTTAAATTTTCGAGATTTTTTGATTTTTTTCTT TATTGCGATATTCCACTCCTGTTTGTCTTTTCAGCAAACACAAAATCACT ATCTAATTCTATCAAAAGTTATAGCCTTATTTGTCTCCGCTGCAAATTAT ACTGAGACAGACTTTAGTATATTTTTTATTAAAGTCATATTCTTAGAGAG TATCATAAAAAAAACCCTGTTAAGGTGGTCATTTATTTTCAAGCTAATGT AATCATCTAAGACTCGTATATTTTCGCAATATGACATCATTTTTCTAGAC TAATACAGTAATTTCTGAGCTATATTTCTTTATCCCTCGAAAACCTTAAA CAAAAACGTTTTCCTGTTTTTTAAGTATGTGATATTTCGTGAACAAACGT GTTTTTCACGAATTCTTTTGTCTAAACAAAACCTATTTAAGTCTTCATTT CCCAAGGAATTCTTTACACAAGTTTAGCTTGATCTGGTCATTGAAAGATG ACGTTTTGTACCAACACTTTCCTTCTTATTGTCACCTTGATGATGTGTGC ATGAAAGGACGTGCTTCATTGAAAACAAAGTTCTTTGCAATGTTTTCCCC TTTCTTCTGTCAAATGCCATTAACTGACTCATTTGATAAATCAGAAAATA TTACTTTCAACAAGTTACTGTCACAAAAGACTTTGTTACCGTTAATAACT GATTGGTCTTAAAGCGTTAAACAGCTTCCTGCGTAGGACAACCTCTTGCT TTGCGAAACGAATTTATTGCTGTCACTTTCCACGAAAGTCAGGTGTTTGG GAGGTGCTTCATGATTTATCTTGAGTCACCTTTCTGAAAAATAAAGTGCC TGATGGCCTATTTACACTGATTGCTTGTCATTCGCACTCCACACCTGGCA ATCTTACANGTGCCTGATGGCCTATTTGCACTGATTGCTTGTCATTCGCA CTCCACACCTGGCAATCTTACACAACCTTTACCATTAGCGGGCAAATTTC ACCCGAAATGTCAGTCTTAACTTGTTTTTAATAACACTCTGGATGACCAC ATTTTTTCGTTCAACGCATCAAAAAATATTTTTGGAAAAATACAAATTTG TTTCACCTGTCAACCAGGGTAGCAATGGTAACGATTAATGAATAGAGAGT AATTGTTTGTTTTACCCAAAGTAATTGCCTCAAATCGCAAAGCAAGAAAA AGCAAGAAAAAAAAACATACAGTTTCTATCACTAAATCGACCATGACCTG TATAATTTCACCCTGTTAAGGTATTAACTTCTTAAAGAAATTATTTTGGA TTATTTCCAACATGCGAGAGACGATCAATCATTGAGATTTTCGGGACTCT TTAGTGGTCGAGTGACTCGACTCTTATTCCAATTCAGTAAGAGGACTGCA GCAAACGGGCTGTAAAGCTGCTAGTAACTATGAAATTAGAAATTTCCATC TGAGGGGTTACACTCTCCAATCTCCTTTAAAGTCTCAAAAGACCGAAGAG AAGAGCTTGTTCTTGCATACAGTACCCATATACAGCAGACAGAGCGTACA CGTGCGGGTGATTAAATACGATCGCGCGGGATGCGGGTCAAAAAATTCCC GTGAGCAATCTCGTTATTTATCAAAAAGTATGAATAGAGAGTAATTGTTT GTTATACCCAAAGTAATTGCTTCAAATCACAAAGCAAGAAAACTGTTCGG GAGGAAAATTTAAACACTTTAAATCTTAAAAACATACAGTTTCTATCACA AAATGAACACAAAACTATTTTTCTGAATGACACTCATTCTATCGTATTTT TTTAGCAATCAAAACGTTCGATTCCGATGTTATTCATTCGAGGTGACGGT GTCATCCTGATTTCACCCTCTTTACGTGTCGGATTGTGAACATTCTGCGC TCCTATTGGTTGGTTGTGTTATCCGGTCATAATGGCTGCCATGTTGAAGA AGAAGACCTTTTTCATTGACACTGTATTACAAAAATAAAGGACAAACTTG CTTTGTTGTGTTCGGTTGCTATGGAAGGTATGACCTTGGGAATATCAGTT TTTTTTAATGTTGAATTTTTGTACATATTTTTACTTATTGCTTTATTATC TCAAAGGAAGAGAAAAATGATGAGACTCGAAATATTTTGCTTCAAAATTC AAACTCGCTCTTGAATAACTGAAATAAAAAGTAATTGCTCTTGAAATTTC GACTTAAACAATAAAATTGTTCTTTCTTTATTTGGCATTTATCGACAAAG TATGACATAATGAGACACAAAGGTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016486TCONS_00016486Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016486-proteinTCONS_00016486-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000240supercontigsc0000240:112952..121577 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
LSM3U6 snRNA-associated Sm-like protein LSm3 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
177.25 165.29 165.57 163.43 16.75 12.72 29.11 32.21 47.76 40.76 25.52 30.35 25.56 27.21 32.89 38.26 66.04 52.96 13.42 17.63 42.13 40.58 87.26 71.96 29.32 27.35 37.83 26.41 42.58 39.89