XLOC_009140 (gene) - C. hemisphaerica

Overview


Name	XLOC_009140
Unique Name	XLOC_009140
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000233:293700..303030-

gene from alignment at sc0000233:293700..303030-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_009140 ID=XLOC_009140|Name=XLOC_009140|organism=Clytia hemisphaerica|type=gene|length=9331bp|location=Sequence derived from alignment at sc0000233:293700..303030- (Clytia hemisphaerica)
CTCCCCTACAAAAATCTACCCAAAGAATAATATTTCTGTTTCCACAACAA
TATTGAATTAATAAATGTGATCGTCTATTCTACAAAATTTCAAGAAATAA
GGTATAAATTTCTCGTAAAATACAAAATCAGGCATATGAGAAAAACTTTT
AAACCACAGTATAAAGGTGTAATATAACTGTGTTGTTAATGTTCTTTATA
TCTGATTTATTTGGTGGTGCAAACGTCGTTTGGCCAGCTGTCACTGCATC
CTTTGGAGCTTTTGCGCACTCCAAGATTTCCATTCTTGTCACTGCAGACA
GGGTCTGGGATTCCATCTCCATCACAATCCTTGAAGACAAATGTTGATCC
TGCGTGACTGCACCATCCTTTTGGTCGAGCACAGACTTTGCCTTTCTTGG
TTGTACAGGAAGCTTTAGGCCAGACTGAAGGGCATCCTTTGGAACTTTGG
ATGACACCGAGATTTCCATTGGTATCTGAGCAAACTGGATCAGGAGTACC
GTCACCGTCACAATCCATCAACGTGTAAACAGATTTAGCATGACTGCACC
AACCTTTGTGTCTTCTGCAAGAAAGGCATGTTGCTCCTTTAGCTCTGCAT
ACTGCATGTGGCCATTCGGATTTACATTTTTGAGAGCTTTTGATGATTCC
CAAGTTACCATTGGTGTCAGAACAAATTGGATCCAAGATACCGTCGCCAT
CACAATCTTGGTAGAAATAAGTTGCTCCTGCATGACCACACCATCCTTTT
GATCGAGAACAAATGTTTCCTTTGGGGTTTTTGCATGTTTCTTTGGGCCA
TTTTCCTCTGCATCCATTTGTCAATCCGATGACACCAAAGTTTCCATTTT
TGTCTGAACATACAGGATCAAGTTTTCCGTCATTGTCGCAATCCATGAAT
GTAAAGGTAGCACCAGCGTGGCCACACCAATTAGGCTGTCTGGCACATGA
ATTTTTACATGTCGATACACCAGTTGCTGTATAGAACAAAAGCAAACTGA
AGCAGACTTTGATCCACATCTTGTTGTTTGTAGTGTTTCTGATGACTTGC
TATTCACTCGCTTTCTTGCAAACTGAATGATTTTTTTTGCAAGTTCCAAC
ACCTATAAATAGGGCACCATTGAAGTCACAATGAACTTGATTTGCATGAT
AAACGTTGAGTCCAAATAAGGTCATTGAAATACACAGAACAATAGAATTA
GACGCCCTAATTTCAGATATTTCGTAATAGACGTTAAGCGTTGAAAAAGA
GGAAGTTAAAGATGCTGGTTATTTACCGAGTGAATATCACCCATTTATTT
GCCAGTTTTTCTTGCTATGAACAAACATTTGTAGTTCCCAAGGCGCATAC
TTGCGTCAGAACTCTAGCCCGTAAGTCCAATTACTGTAAATTTTCCTAAA
TTCCATGTCAGTATGATGGTCGTACGAGGAAGAGATAGCATGTTCCTTGC
ATGCAGCCGCCCTGGAATCATTGAGTGAACCAGCAGGAAAGGCCCTATTC
TAGTGATGTATGGTGGTCCAACCAAGATGAAGATGTATGGAGAGATTCCT
CTCTACGATTTGAATGGGCCAGAAATGCTAAGTAGCTGGACGATACGGAT
TAGGGCTACTTTCACAGGCGGACTTAGGACAATAGAGCAAGTACGTCGGG
AACATGCGAAGGAGTGCTACGCGCGTTAAAGGACAATAAAAATCACATAA
AAATACAGTTAGAAATCTCTTCCTCTGATAAGTTTGACGTGGTCTAAAAC
CGCTTACGACTTTGTTATTAACAATCTCAGGATTTGTGTCTATGGAACAT
GCTACTCACCTGTACCTTTCGTACAGTTATCCTACATTTTTTACATTATG
GTGAAATTTCCGTTTTTAGTGTACCAAGGTTCATGATGTACATATAAACA
TATTCAATTTTTTCTATAATCTAGGACACCCCTGTCTCAGTGACCCAGCT
TTCCTTCTGGGGGGAATTAAATCGTCTTTAAACGTCTCATAGCCCTGGTG
GAACTTCTTTTCACAGTTGGGATGAAAATTTTTATCGAAATCCCAATGGG
TATAGAAATTCTATCATATTACATTACATGATATTTTTTATTTATCTTAG
AGGAGGTGACGTTGAAAAAATTGATTTTCTGTCATCATTGATAGACTTGT
TGGAATTCAGGAACTCTTTTCTTTTGCGTTATGCGGGGGGGGTTTCATGG
TTGGCGGAGGAGTGGAATCGGCCCTTTTTTCGGACGGAGNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTCAAAATTTGCGGAATTTTCGACAAAAA
TATTGAATTTCAAAGGAATTTTCGGTGACGGAATTTTGGTTCAATTTAAG
ACGGTTTGACGGAAATTGGCGAAAAAATTGACGGAATTGCGGAATCGGGT
ACCCCCTGAAACCCCCCCCCCTTATGCTTTTGTACGACTTAGAATCCCAC
TTTGCAAAAGAGTCCTTAACCGTTAAAAATTGATTATACTGCAATTACGT
AGATATATATGTATTAATGTAATATCATGTACTAAAACCCCGAATCCTAT
GAAATAGGCTAATTGTTTCGAGGTCGGAAAATCCAGTTTGGATGGTTTTG
GATTGTAATTTATCCATTGAATTTCAAATAGGGATGAATTTCAATTTTCC
AAAGGGGTTGAAATTGTAGGGTGTTATTTCCGCTGGGACGAAATTTTCGC
CAAATTGTCCCGTGAGTAGGGGGTCCCATATGAGGTTGTTTTCTAAAAGA
CAGTGAAAGTTTTTGAACCCCGACTAGATTTCTGAGCTATAAAAACAATA
GATTTCAAAATCATTATTGAAGAAATTTTCTACCCCCCCCCCTTCCACAT
TTCCACATATTGTTATATTATGACTCCTTAATTTCATCCTGACTCGATAA
AGAATTCTTGCACCAGGTCATTGAGATTGGGGTGTATTTTAACAAGAACT
TTTTGAAAATTCTGAGTTTCATAGAATCGTCAAAGCTGGTCACTGAAGGG
AAACATTTACAAAATCGTACCCAGACTCTTAGTTCGCTTTTAAATTTTTC
TCGTAATGTATGAGTTTTGAAAAAGATATTTTTTGAAACGAGATTTAATT
ATTTAACCGATTATCTACATAACCTTACCAACAAGCCAGCTCACTCATGA
ATTTAAGTTGAGGACTTCCAGCCCCATTGGCACACCCCTGTCTCAGTTAC
ACAAAGAGAAAGTCTAAATGCAGTATAGTTTTCTTAAAGATAGCATTGCA
GGTCATTTTCCTCACTGAAAAACATTTTTGACCTATCTTTCCAGTGAGTT
CTCCCACTGGGCCCGTGTGTTTCCTTCGTCCAGAGATGTTTCCTTTAGAG
CTTCTACAGCTATCTGTAAAAACCTCATCTCCATACAAATTTGCAAAAGC
TCCTCCTTTCATTAATATCTTCCTGCTTGAACCAGGTAAAGTTTCTGTTA
GCAGAAAAATATTGACATTGCTGCGAAATTATTGCACAAGCCTCAGAAAA
AAACACGTCAGATTTTATCAAGTAGAAGAAAAAGAATGCGGAAGAAAATT
TTTATTTTGCGGAAGAAAATTTTTACTTCTTTTATTATTTCTTGCTATTA
TCTGTACATTCATTCAGACCCGGTGGAACAACCGTAAAAGTAGGGAGGCT
GAAGGCTCAAAATGAGATAAAATTCGGTAGAAATTTGAGAAAAATTTCAT
TTGCTAAAAAGCAGAGAGCCTGAAGTCTCCCCAGTCTCCCCGCTCGTACC
CGGCAAACCTAATATCCCTCCAGAATTAACCCCACTAGCTAGAAAAATCC
CCCCTTCCCCAAGGGAGTGACCTACCATAGATGCGGCACTGTAAGGGTGT
TGGCAAAATTTAAGAAAGCTTGGCCATTTTTTGCTTTTGACAAAGACTAC
AAAGATTTTTAAGAAAATGCTTTACTCCAATTTAGCTAATTTGACTCTGC
ACTTTATAGGTCCAATTTCGAGATGCTAATTTTTTTCCACAAATTCGGTA
GTTTCCAGATCGAATGCCTTGGGGGATTTTCACCAGGTTACTGACACAGG
GGTGTCCTTAAAACCTAAAAATGCAAAAAAAGATTATTGGAATCAGTACG
ATTTTTAGAAATATCCATATGTGACTGACTACTTCCACAAGTTTAACAAT
TTCTAGGAATGTTATATTTCCTAGAAATTGTTAACATGTCAAATTCAAGT
TTGTATATTTCTAAAGACGTGGAAAATATCTGATGTCTTCTATATTTCCA
ATTTTGAATTCTATGAATTTTACTTTCAAGAATTGTTATGAAGGAAAATA
TTTTTACTGGCAAAAACTTGGAGAGTAGGTTGTCATCAAAGCAGACAAAA
CCTAGAACTTTGAATTATTAAAAACGGCAATTTCACCATGATTCATCAAA
AGTTGTTAAGGTATCACCAAAATGATATTTGAAATTCAATGGAAAAAAAT
TGCACTCTAAAACCATCCCCATTCGATTTTTTGACCTTGGAACAATAAAA
TTTCTATCTCCACTCTCCATCAAAAGCATCCGATGAAGTAACCCAGTGAA
TACCAAATCTTCAATCACTGTTGCCCAATTCCCTCATTTTTTCGCGAAAA
ATGGAGTATAAAATACAATGGTTCAGACTTTCAGCGCCTTTTTCCTGTAC
AAAGTAAGTCTTGAGCTGGCCAATTTTGTTGCCTACCAGAGGTATAATTT
GCCTTCCTACTTACTACACTTGTCCATTAACCTTTGGAAACGAAAGTCCG
GTCCTACAGTAGGATCCCTGTCTCACAGCTCCGGATTGAACTTTTTCCAC
AGTGGAGATGAAACTTTCTATGCAGCCGAATAGAGATAGAAATTATATTG
TGCCAAGGTCAAAAAATCGAATGGGGATGGTTTTGGTGTTTAATTTTTTT
CCATTGATTTTCAAATGGGGATTATAACAAAGTCAATTNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNATGCTTTCTATGCAGCCGAATAGAGATAGAAATTATATTG
TGCCAAGGTCAAAAAATCGAATGGGGATGGTTTTGGTGTTTAATTTTTTT
CCATTGATTTTCAAATGGGGATTATAACAAAGTCAATTTTCCACTTGGGC
TGAAATTAAGAGTATATTTTCTAGCGGGGACGAAATTTCTCCCGGATCTG
TTATACAGGTGTGTTTCTATTATTTCCTTTCACACCTAATGGTTCATAGG
GCGTTCACCTAATGGTTCATAGGGCGTTCACCTAATGGTTCATAGGGTGT
TCACTTAATGGTTCTGGTGTGACTGCAAGTGTCCTTACCATCATCTAGTC
TAAAGTCCTAATCGGGCAACCACATTATTCATAATTGGCAAAGGGGGTGC
ACAGGAGGAAGAAGATGTTTTACACCAGTCGTTCAAGCCTCTATTTTGCC
GTAAGTATGCGCCTTGGGAACTACAAATGTTTGTTCATAGCAAGAAAAAC
TGGCAAATAAATGGGTGATATTCACTCGGTAAATAACCAGCATCTTTAAC
TTCCTCTTTTTCAACGCTTAACGTCTATTACGAAATATCTAAAATTAATG
ATTCTAATTCTATTGTTCTGTGTATTTCAATGACTTTATTTGGACTCAAC
GTTTATCATGCAAATCAAGTTCATTGTGACTTCATTGGTGCCCTATTTAT
AGGTGTCAGAATTTGCAAAAAAATCATTCAGTTTTCAAGAAAGCGAGTGA
ATAGCAAGTCATCAGAAACACTACAAACAACAAGATGTGGATCAAAGTCT
GCTTCAGTTTGCTTTTGTTCTATACAGCAACTGGTGTATCGACATGTAAA
AATTCATGTGCCAGACAGCCTAATTGGTGTGGCCACGCTGGTGCTACCTT
TACATTCATGGATTGCGACAATGACGGAAAACTTGATCCTGTATGTTCAG
ACAAAAATGGAAACTTTGGTGTCATCGGATTGACAAATGGATGCAGAGGA
AAATGGCCCAAAGAAACATGCAAAAACCCCAAAGGAAACATTTGTTCTCG
ATCAAAAGGATGGTGTGGTCATGCAGGAGCAACTTATTTCTACCAAGATT
GTGATGGCGACGGTATCTTGGATCCAATTTGTTCTGACACCAATGGTAAC
TTGGGAATCATCAAAAGCTCTCAAAAATGTAAATCCGAATGGCCACATGC
AGTATGCAGAGCTAAAGGAGCAACATGCCTTTCTTGCAGAAGACACAAAG
GTTGGTGCAGTCATGCTAAATCTGTTTACACCTTGATGGATTGTGACGGT
GACGGTACTCCTGATCCAGTTTGCTCAGATACCAATGGAAATCTCGGTGT
CATCCAAAGTTCCAAAGGATGCCCTTCAGTTTGGCCCAAAGCTTCCTGTA
CAACCAAGAAAGGCAAAGTGTGTGCTCGACCAAAAGGATGGTGCGGTCAT
GATGGATCAACATTTGTCTTCAAGGATTGTGATGGAGATGGAATCCCAGA
CCCTGTCTGCAGTGACAAGAATGGAAATCTTGGAGTACGCAAAAGCTCCA
AAGGATGCAGCGACAGCTGGCCAAACGACGTTTGCACCACTAAATAAATT
AGATAAAAAAACATTAACAACACAGTTATATTACACCTTTATACTGTGGT
TTAAAAGTTTTTCTCATATGCCTGATTTTGTATTTTACGAGAAAGTTATA
CCTTATTTCTTGAAATTTTGTAGAATAGACGATTATAAGACAAAGTTAAC
ATTCAACATTGTTGTGGAAACAGAAAAATATTTTTTTTGGTAGATTATTA
CAGGGGAGAAAAAATAAAAAAACGTAAATATAAAATTTCTTTTTTCCCAC
CGAACCTTGTTCTACCGTGAATTGGTAAAATAAATAAGAGACTATTTGAA
TTATATGACAACAGCCCTTTGCGATTGTGAAACTTATTCACTAAAACAGG
TTAAAAAGGGAAAAAGTTCGGCATAAATCAC

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00016374	TCONS_00016374	Clytia hemisphaerica	transcript
TCONS_00016373	TCONS_00016373	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00016374-protein	TCONS_00016374-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000233	supercontig	sc0000233:293700..303030 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.65	1.84	0.52	0.54	0.37	0.17	15.64	17.55	833.12	295.67	1698.6	1777.17	1294.8	1211.86	3246.81	3440.14	1114.05	915.93	384.75	525.19	0.87	0.66	1.67	1.35	0	0.03	0.13	0.11	1.01	0.98

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XLOC_009140 (gene) - C. hemisphaerica