XLOC_009138 (gene) - C. hemisphaerica

Overview
NameXLOC_009138
Unique NameXLOC_009138
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000233:276468..283022-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009138 ID=XLOC_009138|Name=XLOC_009138|organism=Clytia hemisphaerica|type=gene|length=6555bp|location=Sequence derived from alignment at sc0000233:276468..283022- (Clytia hemisphaerica)
TTCGCTTGTTGTTTTGATGGATTGGTTGTGAGGAAGTTGCAAAAAGTCTG TTAGTGCAGATTTCTATGCTTTATAATGATTGGCTCAGAAATGTCGAAAA AACAGTTACTTATTAAGGTAAGAGAAATTTAATTTATTGTTCTACGGGAA GACCTTTAGAAAAATATAGGTTGGTCTGTTGGTATGAGAAAAATAAGTTA AAGTTAACCCTTTAAGTGCCACGGTCATTTTTTTCTAAGTTTTTAAAAGA AAATCGCCCGCTGTGCGGACCTGCCTGAATGATAGAAAGGTGCCTAATTG TAAAACTTCAAACTTATTATTATTAACTTATTATTTGCTGGAAGACAGAA TAGAGTAAAGCAGGGCCAAATTGGGAGGTTCTTGGATCACTCGTTGACCA AAAATGGTCAAAAACGGTCAAAATCGTATAAAAGTGAATTTTTGTCAATT TTTTTTTGCATTTTTTTGCTTGACCATGAAACCCAATCCAATTCCCACGA GTTAGACCAAGTATGAGGATTTCTAACTCAAACTGGGCATTACAGGAGGG CTTCGCCCTCCTACATAGCCCATATCTGATATATACGACATTGGCACTTA AAGGGTTGGAACCACTTAATCTAGGTTAGGAAAGTCAAAATCTAAAAGAA TTGTTTGGAAGCAGTAGACTTTTTCCTCTTTTTATCAATGAGCGACTTTC TTGCCATTTCCATCATGCTATTTTAAAATCACAATGGATGAACTTGCACA TTTTAGACTTGTGAAAATGTCTATAATATAACGTCTTGTTTTGCAAGATG TTTATATATTGATTATTATTTTATAGATTATCTTTTCGATTTCGCGAAAA ACCCGTAGAACAATAAAATAATTTGGTCTTGCCTTACTCGCAAAATTACC GAATTGCCCGTGAATCATCCGGGTATTAAGAAAAAGGATATTTAATCTCC TCGCGTAGTCTCTAATACAGTCAGTTATTTTCAGCCGCAAGAATCAATTT CAAATGTTATTGGTTTTAAGTGGTTTGTTGACATAATTTCCAAAGCTATT TTCAAGGTATTTTGAGAGGTATTTGTTTTGACGATAGATTTAGGGAAATG TATTGAACCAGATCTAAGGTAGCGAAGATTTCTGGCGCTCATAAAATGAT AGACCTTTTCATAAATTACGTCATGAACATCACTCGCATCGTTTTGAAAT TATTGTCAAGGCGATTAACTCCCAGCGGATTTTATTAAAACTGCTTTCTA TTCATAAAAGAATCATTCAGTGTCTCAAGGGACATGATCAACATGGAAAT TGTTTGAATACGAGGCAAGTGATATTCATAACGTAATTTATGAAAAGGTC TATTGGCTCAGAAATCTCGAGAAAGTAATTTTTCATTACGCCAAAAGACA AAAGATTTTGCTAGTAGAGTTTATAATCGACATTTTAATATGAATTACAT GATTAAAAAAGGGCGTGTAGGCATGTCCTCACTTTATCGGATTAGATAAA AAGGAGTCACAGCTAGATTGGGCTCTCTTCTATATTGGATATTTTGTTCG GGTGGGGGTGGGGGGTTGGGTAGTGAGAAATCTGCAAAATTTGCCTTGTT TAAGGGGCAAACTTGCTCTGATTAGGGGTGATTTTGAATGTACGGGGGGG GGGTCAACTGATGCTTGTCCGGGGGGTGAGATAAGATTACCCTATTTTGA GAAGTTTCATACTTTGGTATTTTTTTAGTAAATGCTTCGTTAAATAAAGA AAGTGTAATGGAAAGTACCAAGGTGAAAGAACGTGACAACTTCATAAAAA CATTGGACAAATTAAAAGAGCTGAAATTGCCGTTAGCAAAATATTTGGTT GATTTAGATGAGAAAAATGCGATTTTGAGTGATGTCGACAAGAACAAAAC TTTTGCCACTACAGCTGAAAATTATTGCAAGGATCTTTTAAGACATGTTG CTGAAAATGATCCAAGGTTTAAAAACACCTTTTTGTTGTCAGGTAGTTTT TACGACGATTGCAAAGTTGGGAAGCTAGATGAATTTGATTACATGGTGAG AATTGATAACTTGTCGAAACCAGGGCTATTTGAAGCCGTGCCCAGTGATT ATTTCGGATTTATGAAATTAAAAGTTCTTGATGAGTCAATATGTCAAAAG TGGGATGAATTTATACAGGAAGAAGACTGGGATGAAGAAGACGAAGAAGA GTCTGGAGACGAGGAAGACGAAGAACACTCTGGGGACGAGGCTACGAAAA ATGATGATGATGGAAACTCAGAAGCAAAGAAAATCAAAATATTTTCTGTA GAAGCTTTCAAAAATAAATTTTTCGATTTATTGTATAAAGCAACAGAAGC AATCATAATGCCATCAAACTGGTTACGTCATCCCTTCCCCGTTAGCCACG GCCCGTGTACAATGCTGGAATTTCTGGTTAATGATATTGAAAAAGAACCA CACTATGTTTCGATAGATATTGCTCCTTCGATTGCATTTCCAAACTCTGA CAGTTTTGAATTTCCATATGAACAGTATATCAATAATGAAGACCATTCAG TCAAATTTCTATCAAAGTTTGCAATAGGTGATATGGCACAGAGAGAACTA CTCTTAGTTCCGTTCTACTTTGACGAGCACTCTAAAACGGATTACGGGAC ATGGGCGTGGCATTATAGTGATAAATTCAGAGTCTCATTTTCATTGGTAG AGAAACATATTTTTTCTACTTTTTCCGCAAAAAGCGTTGAGAAACGTTTG TATAGGACATTGAAGATACTGAAAGATGAATACATGCAAGATTCGCCAGG AAGATTTCCAGAATTTCTTGGAATCGATAATGATAAACCGCCTTCAACAA AACTCACTGTAAGTAGCCTTTATTTCGGACGCAACTTTTGAGCAAAATAG ACTTTTTTCTCTGACGAATTCTATCTCATTTTGAGCCTTTAGCCCCTCCA CTTTTACGGTTGTTCCGCCGGGCCTTAGACGTACTATTGTTTTTCGTTTG AGAAACAACTTAACTGGGTGCCCTTTAATAGCAATCAAAAATAAGACATT GGGATCGGAGAAAGAGCTCGCATTCCTCAATGGATGTAGCATGTTGCATT GCACAAACGCGAAAAAAACTTCTCGTGTCCCCAAGCCTTAACTTGCACAC TTTAAATCGCTTTGTATTGGTGTATGGTTAGCTTTCTGATTTGATACCAA AAGGCATTACAAAGATACCCTGTTTGTGGCACATCCTTTTTCTCCTTAAG CAAACACCATACCACGCCCTTCTCAGTATTTATTATGATGCTTATTCGTT TCCTTCTTATCTTTGTTATTAAAAAAAATAGAAAAAACATCCTTGAAGAA ATATGCTGTATAATTTGATTTGGAAATTTTCTTTTAAAGATGCCATCATC GTTGGATGTGAGAACCGGTCAAATTGCCAACGCGAATTCTGATGGTGATA TAAGCGATATTGCACTGCCAAAGAATACATCGTTTCATGTCAAACCCGAA GTTTCGGAAGATATAAACTTTCTATCGGTATGTACTATTTTGAAAGATTT CTTCTACTATGGTACGTTATTTTTGTGAAATGTCACCATTGACTGACCCT TGACTCTGTTTTCGCCAGATTTATATAATTTTTTCACCAGAAGCACAAAG AAATTTGGATATTTATTCATGAAATTCATAGACCAATATTTCAGGTCCTA GGTTTCTTGAAATATACTTCGGCAGAAATGGGTGATGAGTATGTGCGGAA GGTAAGGGAAGGTTTTTTCACCTTCCAAAGTCTCTCTAAGGGTTGCAAAT TCAAAAAGTCTTAATAGTATCTTCAAGGGTCGGTTTTTTTCGCTACCTCG AGTCGAAGAAGAGTAAAAAGTCAAGAAATTGAGATGTTCTGGAGTTTTTA TAAGATACTTCACTAATTGGTCATTTAAAGTAATAGAGATGACGCGTTCT TTAGAAAAAGTAACAAAATTGTTTTATTACAGGCTAACGACCAACCATAT CAAGAAAGAGCTTGTAAAAACTCCAGCTTGTCCCAAGAAATTAAGCAAAC TTTTCGAAAATAGAGAATTCTTTTAAAAATCGAGAAATTTTTGTCCAATT TTGTCTAATAAGAATATGGGTCACTTTTTTAGCAATTTTGGCCTTTTAAG GGTCACCATTTCAGCAAAAATCAGTTTCTCTAACGGTTAGTTTTCCGAGG TCCTGTCCGCTAAGTTTGAACACAAATCTTTTGTGATTTGGCAACCGCAA CCCTATAAACCATTCCATTTTCAGTTAGTACCTTCAAACTCCTGTTTGCA GGGATTTGTTCTGAAAATTGACTTCATCATCATGAAATGTTCCAAAAAGG GTTCCGCTTTTCAATTTGCTGCAAGTTTTTATTCTAGTGGCTCTAGGATC CATAAGGAACATATGTGCCAAGTTTCAGTCACATGTCTAATTTGTCTGTC ATCTGAACTCTTGGTAGAAAACCAACTAAAAGCGGGAAAAAAGGGAAAAA ATTCTTTCAAGACACTGGATCCTGGGTATTTTTTTTGGGTAGTCCCTAGA AATATTTGTCCACTCCCAGCATAAAATATTAAACATAGGTTTTTTCATAC GACGTCAGATTCTTCATTACTTAATGAAATCTTCAGAAGTTGAATTTTAC AGATTCAAGATTTGGAGAGCTGTTTGAGTGGGAACATATTTTAAACTATA TAACGAATATGATAATACTAGCCGGTACCCGGCGTCGAACGCCGGTTAAG CTGTAGCTGAACGCACTAAAAGTCCTTTGGATGTTGAAGCTGGCTTAAAA AAGCGATCAAATAAAAAAAAGAAATTTCTACAACGTTTAACTCTAACCNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCGTGACATAATTTTTTGTTT AAGTCAAAAGTTATCAGCATCGTTTACTGTGTACCAGTGTCGTTTGAAAC GACTCTGCAGGTAGTTATTTTTATAACTATTTTTTTTATGTTTTTATTTT TTTAAATGACAATTTTTCAGAAAAAAGTGGGAAGGTCACAAAGAATAGTG CAACTCTTTGTTTTTATCAGATTGAAATAAAATAAGACAATTCTAAGTTG CTTTTTTAAACCCTTGTCGTAACTNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAC AAATTTGTGGAGCAAGAGACTAAAAGTCATAATTTTAAAACACAAACAAA GCGAAAACGAAAGTGGTGACACACAGACACACAAAGCACCGCTATTAATA TGATGATAATTCATGACGTAATGTTTTATACGGAATCAATTAAAGTAGCC CGGGCGTTTTCAACTAGTTTTATTGCTAAATTCAAAACTAGTGGCAAATA CCCAGTATTTTTTGCTGGTTGTTTCCATATAAAACATTACATCATGAATA TAACAAATAGTCCTTTTTTCTGTTTTTCAGACATACGTTATGAAATCGAC ATGGTTATACTTTATGATGTATCAAACGAAAGACGATGAAGAATGGACAG AAGAGGAGTTGGGTGGAATGGTCATCGAATGTTTAGATTTCTTATTCGTC ATTTATCAAGAAGATAAGAATGACGTCAACAACTTCTTTTTGGACGATGT CACCAAAAAACCACCGGGAAAGTTGAAACAACAAAAGATTTTATTGTCTT TAACTGAAATGGTGGAATCGTTATACCAAAAAGTTAATTCATAACCAGAT ATAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016370TCONS_00016370Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016370-proteinTCONS_00016370-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000233supercontigsc0000233:276468..283022 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.52 4.53 5.56 6.91 0.3 0.18 0.66 1.09 1.5 0.71 1.36 0.52 3.92 4.48 8.12 11.2 0.66 0.71 1.51 1.82 0.59 0.73 3.39 2.93 1.76 2.01 0.44 0.36 1.98 2.18