XLOC_008968 (gene) - C. hemisphaerica

Overview
NameXLOC_008968
Unique NameXLOC_008968
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000225:330153..338147+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008968 ID=XLOC_008968|Name=XLOC_008968|organism=Clytia hemisphaerica|type=gene|length=7995bp|location=Sequence derived from alignment at sc0000225:330153..338147+ (Clytia hemisphaerica)
CTCCCCCAGACATACTGCCTGTTTTTTTACTTGAGTTGTTGATATGAAAA AGCTAGAATAGAGAAAGTAATAATCTGGATGAAAGTCATGGTTAAACCAT TTAAACCAATTGAGTTTCACAATAATGGTTACGTAGCATCACCGTTAACA AAAAGAGTTGCACCACAAGTAAAGAATCCCCAGCATCAAGGTATTAGTGG AGATGAAACCATTATTGATATTGGTGATCACCAGGACTACgaagaaaaca aaattgaaggtaaatagttttagaaATCCAAGAATTAAAGCCAAGCCCCG GCAAATTTCTTGTCCACAGTAGGAATGGAAATCtctatcaaaatcccaat gggaaaaaaattctattgcTCCCAGCTCAATATAAATAAGAAGACGCCCC AGTTTCAAAGACCCATTAACACaatacaccctcttctcacagacccactg agatACCTTCCCACTGGATAAatcggccaaaatatcgtccccagtggaaa attataccctaatttttatccccgctgaaaataatcagataagtaaattt tcactgcaaaatattatgctatttctTCCATTCCCATCGAATTTTCTGAC TCGAAAACAATAGAGTTTAAATCCCGAGCCATAAAAAGCATGGGAATGTC AATCCCTATCGAGTTTTGGTcagttatttttacccccactggctgaaaac tCCTACTGGTTCCGTGAAAAGCAGGTATCACAATGATACCTTTCATCTTA TTTCTTTTGAATGAAGCTATAAATTTCCAAGTTTAATGATGATGACTGGC TGTCTAGGAGGTGTCTTGTTAGAACTGTCTTTGCTGTAGCTTACCTTCTC AATGATGGAATGTGAAATCAATACTTAGCACGGTCACCAACAAGTTTCTT GAGTTTTTGTCTACCCAATTTCCCTCAAAAAGAGGGTATAGAGAGTGTGT GAATACAATTTTCCCATTTCAAACTAATAAAACAGTGATACCCATCTTTT ATCTTTCGCACCCCTGACAAACACAGCTTTTTATAAACGCTCTTCCATTG GCTTATTTCAGTATTGAGTATGGAAACTCAAATCAGTCACATTCAAGAAA CGAATGGTAACATAGAAGTAAACAAAGATATCACCAACATTAATACACCA TCAGAAACTACTAGTGTTAATGGTACAGAAGAAGTTGGACCTACCTGTCG ATTGACTAAATTTATAATGGATCAAAAACGTATATGCAGCCGAAAACCCA TCTTGAAACGTGCTTTAAATCCTTGTTTAAATGCCATGAAATTGGTCGGT TTGTATTACGATTGTGAGAAAGGCACTGGGATCAAGTATCGAATCGCCCA ACTCTATGTCGTCATTATCAACTGCTTGATTCTGCTTGATTTCATAATGA ATATTGCTAGTAAGTTAGTTTGATTCatccatagtccgtataaaaaccTA ACTCGTGCCTAGTCCATAAAAATAAActctggtctggaagccttttgttt ctttcccttgaccttgcgttgagaaattagtttgttttgctcactattta atcatgtgattagatcTTAAACCAATTCTaagaggagtacttggtaacgt gatcaaaaattgagcaaatcaattttcatcttttcatAATAataaaggaa aaagctaacaaaaagttaaatcaATAAGCCTCCAGACCAGTGTTTCTTTT ATAAGGACTGTGGTTTATCAGCCTGTTATTTACTAAGGTCTGTTCGTTTA CCTCTATGCAGCCATCTTGAGATGGAGTTAGTCTAATCTCACGCTGCAAC ATGGTTTCCACATGATACCCTCACTTAAAATAAAATGACTTTAGTTCATT TTTATTACGTGTCGATTAGCTTATCGATTATCCAACATATTTTTTTGTAC ATCCAATGTCTTTGTATTTTGCTAATTCGTTGGACTTAGATTCAATAGCT TACTTTACGGGAGCTAATATTTTGCGGTGTAAGGATATGAAATACCCACA TttctttcaaagatttttatAGTGGACATCCACAACAACATAAGTTAGCT CCCATTAGgattaccgtattacttcgactAAATGGCTTCTCGAATAAAGG CCCGGGGAGTTTATTCGAAGTTAAACAATACAAATGCTTATCTATCTAAT TCCACTTTAGCTGCATTTCTTGGCGAAACAATGAATGACTACTACATGTT AAGTATCTTGATCATCTACAGTCTAAAAGGTGTTATTCAAGCCAATGTCA TTCATTACGTATCCCGTAAATGCGTCTTATGGAAATTCATACGTAACTTG AATGAATTCCTCACAGATATCAAAGTCAGTGACAACGTAAAGGAACACGA AAAGAGATTCCGAAACAAGACATTCCTTGGatttttgatttcatcattAA TCATTTTGGCTTTTTCATCGACTATCATTGCTATGATTGTTCATCCATCT ACCGGTGAATTGTCACAAACTTTGAGACTTGCACCGTTTGTTAACCAAAC CAATTTAATGTAAGTATAATATTACATATTTTACCCTAAACACCACCAAG GGATACGAGGTCGAGTTTTCTAGCAAAGATTGacgtaaaattttgttttt gagaaaaatcccAATTCTTTTTGGAATAGGGATTTCGAAGAGGCGAAGGa gtattctggtctgtaaagtttACAAATGGAGTAGGTAGTAGTAGACATTT TGTACTTGCCGTAAAATCATTCGGTTTGATACATGTAATCCTGATTTAAA CACCTTAGTTTCTTTTTGCTACAAAAGATACAGATATGCAAAAACGGTCA CAGATATCATGATGTTGACAGCTTGGGTTGCACCAATTACTTTGTGTCTG ATTCTCATCAATTCCTTGACATACACCTTTGAAGAATTTTACAGATACTT GGATACCacgaaagaaaatgtttgtcgaaggttttgtttttttctcactt tttatcTCGTCATGGtatgcatcactgcaatgtcttgGACATCACAGAat agacccaacagctgattggttgtaagtgacgtaaaatcagtcactacgtc acttgcaaccaatcagctgttgggtccgtgatgtagtGTTAAAAGACATT GCAAAGGTGCATATCATTGTTAGATTACATGAGAAACTTCTTAAAGTGTT AAAGTGTTAAAAATAAACTCTTGGTCAAGCTTTATTTATGCTTATATTTC CCTAGAATGAAAGACCTAATACTAACCCTAGGAATGTTAAAAAAAGTTAT CGTAATTAATAGAAGTTATAGCGTACAGCATGTCTTAAAAAAGGTTTTAA CATTCGAAAAATGTTCACATGAATTTTAATGCTACAGGGTGTCCCGGAAA AGTACTGTGTCAGCACTTTTTCTTACTTATTAGCCTATTCCATAGGATTC GTGTTATAAGTGCATGATATTTTTGCATATGTAGTAATCAACTTTTTATT GTTGAACACTCTTTTGCGAATTGAGTTTTACAAAGAGTTCATGAATGatg acaaaaatcaaaaagaatttcaacgTCTTCCTCGAAGGGAAATATGCACA GATTGTTATATCATTCCCctttaaattgaatagaaaaaagCATGTAACAG ATGCACGAATCTTATGAAAGAGGCTCATAGAAGAGAtcttttttccggac acactgTAGATATAGCCCTATCAATAACTTTCTTTCCTCCATAGATTCTT CTTATACGACACACGAAAGAAGTTTCTACGTCTTACTGAACTCTGTGGTG ATTTTGATGATATGATGTCATTTCTGCTCATGTTTTCCTATCTTCTCGAC ATTGTTATGATTTGTCTTCTTTTACGTATGGTCGCATTTTCATACACCGA AATGATATCACGACTTGTTACTTCAGCGTGGTTGATGTTACCTATAATGT CTTTGATAATATTGTCAAATAAAGCGTCCGAATTGTATGATACTGTAAGT ATTAACCGTTCAAAATCGAGTGACTTTTATAATCGTCAAATGTGGGTTTG CTTGTGATCGATGTTGCAAAGTGCTAAATTAAACCAGAGccaaaagtaaa atattaaaagatatctttcatCACAACAGAGAGTACAAAGTACAATACTC AGAGTTCCGTGCTACTGTAGTACGAAACTCTGAGTAGTGTACTTTTTACT CTCTGTTGTGATGAAAGATATCGTTTAATCTTTTTATATTTCATCCTCAA AATTAGCCAACATACCGAGTATTAGGCTATCTCCTGAGTACTTGGTTTAA ACGGACATAAACTATAGATTGTAATAAACTATTAAACtgtaacattttta ttttttgctacttttttacgatttcaaaaaacgAAGGCTGAAAACCTTCA CATCTTTCAAAAACTGTTGCATGCTGGAAATGTTAAATTTACAAACATCC TTATCACGGTGGTCCAGACCTCCTTCCTACTTGAAAATATGACTccaaag attttcgaaaacaaaaataaataataaaagtaAATTTATGTGCGAATTTG CTCAAAGCCATTGATTTACTGTTTTTCAATGCATCAACTTCTTGTAGCTG TAACCTTCAAACCATAATGATAATATAGGATGACCAGACCTCCTTCCTAC TTGAAAATATGACTccaaagattttcgaaaacaaaaataaagaataaaag taaATTTATGTGCGAATTTGCTCAAAGCCATTGATTTACTGTTTTTCAAC GCATCAACTTCTAGTAGCTGTAACCTTCAAACCATAATGATAATATAGGA TGACCAGACCTCCTTCCTACTTGAAAATATGACTCCAAAGATTTTCGAAA ACAAAAATAAAGAATAAAAGTAAATTTATGTGCGAATTTGCTCAAAGCCA TTGATTTACTGTTTTTCAATGCATCAACTTCTAGTAGCTGTAACCTTCAA ACCATAATGATAATATAGGATGACCAGACCTCCTTCCTACTTGAAAATAT GACTccaaagattttcgaaaacaaaaataaagaataaaagtaaATTTATG TGCGAATTTGCTCAAAGCCATTGATTTACCGTTTTTCAACGCATCAACTT CTAGTAGTAGCTGTAACCTTCAAACCATACTGATAGTATAGGATGACCAG ACCTCCTTCCTACTTGAAAATATGACTccaaagattttcgaaaacaaaaa taaagaataaaagtaaATTTATATGCGAATTTGCTCAGAGCCATTGATTT ACTGTTTTTCAACGCATCAACTTCTAGTAGCTATAACCTTCAAAGCATAA TGATAGTATATGATGTTAATGCCACTCGACCTTCTTTGGTAACCATAGGG ACAGAAGATGCAACGTTATATCCAAGATATCAAAATTAATAACATTGACC TTGACACCAAGACAGAGGTATGGGATCTATGATCTACAAGttattttaaa taatttgtttTCATACTCAATCGAAAGATACAGCCCAAAGCTTATTGAcc taaaaatcatcaaaacacaACAAAGAGGAACCTATTTCATAGTCAACCAG GCAGAAAATTTGAGCTGTATTTTTTAACTGcagggtgacccacgaaaaag ttcggacatTTTTCGGCGTctcgaggccgaacaaatgtctcaaagtgctt gaaattttaatatgtagaaagtagatattgtaacttaaagtttgagctat tactttttaaatttgacccacAAGTTTCCCTACTTATGaccttttaaagt caaaattcacttttcggaaagagcgaaattacgtcaaaaaagaggtatca aattgttttattatcaatcaatcaagcaaGGTNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNatttacaataaatttatataaatctacttcgtt gttaatttattattttacaaactttaaTTACCTACAACACTAATTAACGA GGTCGTAAAACATCAGCTTACTCGAAAAACACAAtgttaaagataaagaa aataattttaatttgatacctcatttttgacgtgtttttgcactttccaa taattgaattttgactttaaaagctcataaatgaagaagcactgaaccaa atttaaaaagtaatagctcaaagtttaagttagagcatcctttatcttta aaaaaaaagattgagtttATATGACTTTTATTTCAGCCCCTAGCCAACGA Aaaccgtccgaactttttcgtgggtcacccggtaaacatattttttaatt tttttttcaagatgaTAACCCTCTAAGATGGAAGATTTCCTAACATGATC GATTATAGGacaattctacaagaagttgtcatttttttcttcttcatttt ttgaagttATTCTACTCTTTCCAACATGCTCATACACGCCATGTcattca aaattatttcaaaagttacagcctttttgtGTCCGCtgcagattttatta aaacagaCTTTATTGTAGAAATTGCAGCTTGATAGAaatttcattcatct taaaagCAAATTTCATTGAAAGATTCACACTTTTAATTTTCTAGTTGGAT CTACTACTCTTCCACATGAGTAGTGAGCCAGTTGTTATGACGATTTGGAA AATGATCCCACTCAATCGATCCATTATCGTTTCGGTAAGACTAAAAGTTG ATATCAAGCATAACAGAAAACATAATTCAGGTCAAACCTTACACATTATT TAGTAAGGACATCTTTCCAATATCTTTGAATTGAAAATACGGAATCTTGT CATAAAACAATTGCAAGAAACTTTCATATACTGTATGCTTTTAgttattt aattattttgtttCTCATCTGTGTTCTTGTAGATCTTTTTCTCCTTCTTT TTTTAGATCTTTGTCAGCATTGTTACATACTTTGCAATGCTTATTTCCTT CCTCTAAAACATCAAATCGAGTGCAAGGACGATTGTGTTATTTTTCACCA AGGATGTTGATTTAATGTAGCCTTCAACAAAtacaatttcaatatttcaa gGGAAAAACGAACACTTTGGATTTAGATAATagaaagattttattacaaa acacATACGCATTAACCATTTAACGactgtgtctttttatttttc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016048TCONS_00016048Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016048-proteinTCONS_00016048-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000225supercontigsc0000225:330153..338147 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.05 0 0.05 0 0.03 0 0.18 0.19 0.14 0.02 0.35 0.05 1.72 1.35 0.47 0.32 0.15 0.35 3.63 4.61 0.89 0.97 0.29 0.5 0.3 0.35 1.63 2.05 0.61 0.36