XLOC_008968 (gene) - C. hemisphaerica

Overview
NameXLOC_008968
Unique NameXLOC_008968
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000225:330153..338147+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008968 ID=XLOC_008968|Name=XLOC_008968|organism=Clytia hemisphaerica|type=gene|length=7995bp|location=Sequence derived from alignment at sc0000225:330153..338147+ (Clytia hemisphaerica)
CTCCCCCAGACATACTGCCTGTTTTTTTACTTGAGTTGTTGATATGAAAA
AGCTAGAATAGAGAAAGTAATAATCTGGATGAAAGTCATGGTTAAACCAT
TTAAACCAATTGAGTTTCACAATAATGGTTACGTAGCATCACCGTTAACA
AAAAGAGTTGCACCACAAGTAAAGAATCCCCAGCATCAAGGTATTAGTGG
AGATGAAACCATTATTGATATTGGTGATCACCAGGACTACgaagaaaaca
aaattgaaggtaaatagttttagaaATCCAAGAATTAAAGCCAAGCCCCG
GCAAATTTCTTGTCCACAGTAGGAATGGAAATCtctatcaaaatcccaat
gggaaaaaaattctattgcTCCCAGCTCAATATAAATAAGAAGACGCCCC
AGTTTCAAAGACCCATTAACACaatacaccctcttctcacagacccactg
agatACCTTCCCACTGGATAAatcggccaaaatatcgtccccagtggaaa
attataccctaatttttatccccgctgaaaataatcagataagtaaattt
tcactgcaaaatattatgctatttctTCCATTCCCATCGAATTTTCTGAC
TCGAAAACAATAGAGTTTAAATCCCGAGCCATAAAAAGCATGGGAATGTC
AATCCCTATCGAGTTTTGGTcagttatttttacccccactggctgaaaac
tCCTACTGGTTCCGTGAAAAGCAGGTATCACAATGATACCTTTCATCTTA
TTTCTTTTGAATGAAGCTATAAATTTCCAAGTTTAATGATGATGACTGGC
TGTCTAGGAGGTGTCTTGTTAGAACTGTCTTTGCTGTAGCTTACCTTCTC
AATGATGGAATGTGAAATCAATACTTAGCACGGTCACCAACAAGTTTCTT
GAGTTTTTGTCTACCCAATTTCCCTCAAAAAGAGGGTATAGAGAGTGTGT
GAATACAATTTTCCCATTTCAAACTAATAAAACAGTGATACCCATCTTTT
ATCTTTCGCACCCCTGACAAACACAGCTTTTTATAAACGCTCTTCCATTG
GCTTATTTCAGTATTGAGTATGGAAACTCAAATCAGTCACATTCAAGAAA
CGAATGGTAACATAGAAGTAAACAAAGATATCACCAACATTAATACACCA
TCAGAAACTACTAGTGTTAATGGTACAGAAGAAGTTGGACCTACCTGTCG
ATTGACTAAATTTATAATGGATCAAAAACGTATATGCAGCCGAAAACCCA
TCTTGAAACGTGCTTTAAATCCTTGTTTAAATGCCATGAAATTGGTCGGT
TTGTATTACGATTGTGAGAAAGGCACTGGGATCAAGTATCGAATCGCCCA
ACTCTATGTCGTCATTATCAACTGCTTGATTCTGCTTGATTTCATAATGA
ATATTGCTAGTAAGTTAGTTTGATTCatccatagtccgtataaaaaccTA
ACTCGTGCCTAGTCCATAAAAATAAActctggtctggaagccttttgttt
ctttcccttgaccttgcgttgagaaattagtttgttttgctcactattta
atcatgtgattagatcTTAAACCAATTCTaagaggagtacttggtaacgt
gatcaaaaattgagcaaatcaattttcatcttttcatAATAataaaggaa
aaagctaacaaaaagttaaatcaATAAGCCTCCAGACCAGTGTTTCTTTT
ATAAGGACTGTGGTTTATCAGCCTGTTATTTACTAAGGTCTGTTCGTTTA
CCTCTATGCAGCCATCTTGAGATGGAGTTAGTCTAATCTCACGCTGCAAC
ATGGTTTCCACATGATACCCTCACTTAAAATAAAATGACTTTAGTTCATT
TTTATTACGTGTCGATTAGCTTATCGATTATCCAACATATTTTTTTGTAC
ATCCAATGTCTTTGTATTTTGCTAATTCGTTGGACTTAGATTCAATAGCT
TACTTTACGGGAGCTAATATTTTGCGGTGTAAGGATATGAAATACCCACA
TttctttcaaagatttttatAGTGGACATCCACAACAACATAAGTTAGCT
CCCATTAGgattaccgtattacttcgactAAATGGCTTCTCGAATAAAGG
CCCGGGGAGTTTATTCGAAGTTAAACAATACAAATGCTTATCTATCTAAT
TCCACTTTAGCTGCATTTCTTGGCGAAACAATGAATGACTACTACATGTT
AAGTATCTTGATCATCTACAGTCTAAAAGGTGTTATTCAAGCCAATGTCA
TTCATTACGTATCCCGTAAATGCGTCTTATGGAAATTCATACGTAACTTG
AATGAATTCCTCACAGATATCAAAGTCAGTGACAACGTAAAGGAACACGA
AAAGAGATTCCGAAACAAGACATTCCTTGGatttttgatttcatcattAA
TCATTTTGGCTTTTTCATCGACTATCATTGCTATGATTGTTCATCCATCT
ACCGGTGAATTGTCACAAACTTTGAGACTTGCACCGTTTGTTAACCAAAC
CAATTTAATGTAAGTATAATATTACATATTTTACCCTAAACACCACCAAG
GGATACGAGGTCGAGTTTTCTAGCAAAGATTGacgtaaaattttgttttt
gagaaaaatcccAATTCTTTTTGGAATAGGGATTTCGAAGAGGCGAAGGa
gtattctggtctgtaaagtttACAAATGGAGTAGGTAGTAGTAGACATTT
TGTACTTGCCGTAAAATCATTCGGTTTGATACATGTAATCCTGATTTAAA
CACCTTAGTTTCTTTTTGCTACAAAAGATACAGATATGCAAAAACGGTCA
CAGATATCATGATGTTGACAGCTTGGGTTGCACCAATTACTTTGTGTCTG
ATTCTCATCAATTCCTTGACATACACCTTTGAAGAATTTTACAGATACTT
GGATACCacgaaagaaaatgtttgtcgaaggttttgtttttttctcactt
tttatcTCGTCATGGtatgcatcactgcaatgtcttgGACATCACAGAat
agacccaacagctgattggttgtaagtgacgtaaaatcagtcactacgtc
acttgcaaccaatcagctgttgggtccgtgatgtagtGTTAAAAGACATT
GCAAAGGTGCATATCATTGTTAGATTACATGAGAAACTTCTTAAAGTGTT
AAAGTGTTAAAAATAAACTCTTGGTCAAGCTTTATTTATGCTTATATTTC
CCTAGAATGAAAGACCTAATACTAACCCTAGGAATGTTAAAAAAAGTTAT
CGTAATTAATAGAAGTTATAGCGTACAGCATGTCTTAAAAAAGGTTTTAA
CATTCGAAAAATGTTCACATGAATTTTAATGCTACAGGGTGTCCCGGAAA
AGTACTGTGTCAGCACTTTTTCTTACTTATTAGCCTATTCCATAGGATTC
GTGTTATAAGTGCATGATATTTTTGCATATGTAGTAATCAACTTTTTATT
GTTGAACACTCTTTTGCGAATTGAGTTTTACAAAGAGTTCATGAATGatg
acaaaaatcaaaaagaatttcaacgTCTTCCTCGAAGGGAAATATGCACA
GATTGTTATATCATTCCCctttaaattgaatagaaaaaagCATGTAACAG
ATGCACGAATCTTATGAAAGAGGCTCATAGAAGAGAtcttttttccggac
acactgTAGATATAGCCCTATCAATAACTTTCTTTCCTCCATAGATTCTT
CTTATACGACACACGAAAGAAGTTTCTACGTCTTACTGAACTCTGTGGTG
ATTTTGATGATATGATGTCATTTCTGCTCATGTTTTCCTATCTTCTCGAC
ATTGTTATGATTTGTCTTCTTTTACGTATGGTCGCATTTTCATACACCGA
AATGATATCACGACTTGTTACTTCAGCGTGGTTGATGTTACCTATAATGT
CTTTGATAATATTGTCAAATAAAGCGTCCGAATTGTATGATACTGTAAGT
ATTAACCGTTCAAAATCGAGTGACTTTTATAATCGTCAAATGTGGGTTTG
CTTGTGATCGATGTTGCAAAGTGCTAAATTAAACCAGAGccaaaagtaaa
atattaaaagatatctttcatCACAACAGAGAGTACAAAGTACAATACTC
AGAGTTCCGTGCTACTGTAGTACGAAACTCTGAGTAGTGTACTTTTTACT
CTCTGTTGTGATGAAAGATATCGTTTAATCTTTTTATATTTCATCCTCAA
AATTAGCCAACATACCGAGTATTAGGCTATCTCCTGAGTACTTGGTTTAA
ACGGACATAAACTATAGATTGTAATAAACTATTAAACtgtaacattttta
ttttttgctacttttttacgatttcaaaaaacgAAGGCTGAAAACCTTCA
CATCTTTCAAAAACTGTTGCATGCTGGAAATGTTAAATTTACAAACATCC
TTATCACGGTGGTCCAGACCTCCTTCCTACTTGAAAATATGACTccaaag
attttcgaaaacaaaaataaataataaaagtaAATTTATGTGCGAATTTG
CTCAAAGCCATTGATTTACTGTTTTTCAATGCATCAACTTCTTGTAGCTG
TAACCTTCAAACCATAATGATAATATAGGATGACCAGACCTCCTTCCTAC
TTGAAAATATGACTccaaagattttcgaaaacaaaaataaagaataaaag
taaATTTATGTGCGAATTTGCTCAAAGCCATTGATTTACTGTTTTTCAAC
GCATCAACTTCTAGTAGCTGTAACCTTCAAACCATAATGATAATATAGGA
TGACCAGACCTCCTTCCTACTTGAAAATATGACTCCAAAGATTTTCGAAA
ACAAAAATAAAGAATAAAAGTAAATTTATGTGCGAATTTGCTCAAAGCCA
TTGATTTACTGTTTTTCAATGCATCAACTTCTAGTAGCTGTAACCTTCAA
ACCATAATGATAATATAGGATGACCAGACCTCCTTCCTACTTGAAAATAT
GACTccaaagattttcgaaaacaaaaataaagaataaaagtaaATTTATG
TGCGAATTTGCTCAAAGCCATTGATTTACCGTTTTTCAACGCATCAACTT
CTAGTAGTAGCTGTAACCTTCAAACCATACTGATAGTATAGGATGACCAG
ACCTCCTTCCTACTTGAAAATATGACTccaaagattttcgaaaacaaaaa
taaagaataaaagtaaATTTATATGCGAATTTGCTCAGAGCCATTGATTT
ACTGTTTTTCAACGCATCAACTTCTAGTAGCTATAACCTTCAAAGCATAA
TGATAGTATATGATGTTAATGCCACTCGACCTTCTTTGGTAACCATAGGG
ACAGAAGATGCAACGTTATATCCAAGATATCAAAATTAATAACATTGACC
TTGACACCAAGACAGAGGTATGGGATCTATGATCTACAAGttattttaaa
taatttgtttTCATACTCAATCGAAAGATACAGCCCAAAGCTTATTGAcc
taaaaatcatcaaaacacaACAAAGAGGAACCTATTTCATAGTCAACCAG
GCAGAAAATTTGAGCTGTATTTTTTAACTGcagggtgacccacgaaaaag
ttcggacatTTTTCGGCGTctcgaggccgaacaaatgtctcaaagtgctt
gaaattttaatatgtagaaagtagatattgtaacttaaagtttgagctat
tactttttaaatttgacccacAAGTTTCCCTACTTATGaccttttaaagt
caaaattcacttttcggaaagagcgaaattacgtcaaaaaagaggtatca
aattgttttattatcaatcaatcaagcaaGGTNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNatttacaataaatttatataaatctacttcgtt
gttaatttattattttacaaactttaaTTACCTACAACACTAATTAACGA
GGTCGTAAAACATCAGCTTACTCGAAAAACACAAtgttaaagataaagaa
aataattttaatttgatacctcatttttgacgtgtttttgcactttccaa
taattgaattttgactttaaaagctcataaatgaagaagcactgaaccaa
atttaaaaagtaatagctcaaagtttaagttagagcatcctttatcttta
aaaaaaaagattgagtttATATGACTTTTATTTCAGCCCCTAGCCAACGA
Aaaccgtccgaactttttcgtgggtcacccggtaaacatattttttaatt
tttttttcaagatgaTAACCCTCTAAGATGGAAGATTTCCTAACATGATC
GATTATAGGacaattctacaagaagttgtcatttttttcttcttcatttt
ttgaagttATTCTACTCTTTCCAACATGCTCATACACGCCATGTcattca
aaattatttcaaaagttacagcctttttgtGTCCGCtgcagattttatta
aaacagaCTTTATTGTAGAAATTGCAGCTTGATAGAaatttcattcatct
taaaagCAAATTTCATTGAAAGATTCACACTTTTAATTTTCTAGTTGGAT
CTACTACTCTTCCACATGAGTAGTGAGCCAGTTGTTATGACGATTTGGAA
AATGATCCCACTCAATCGATCCATTATCGTTTCGGTAAGACTAAAAGTTG
ATATCAAGCATAACAGAAAACATAATTCAGGTCAAACCTTACACATTATT
TAGTAAGGACATCTTTCCAATATCTTTGAATTGAAAATACGGAATCTTGT
CATAAAACAATTGCAAGAAACTTTCATATACTGTATGCTTTTAgttattt
aattattttgtttCTCATCTGTGTTCTTGTAGATCTTTTTCTCCTTCTTT
TTTTAGATCTTTGTCAGCATTGTTACATACTTTGCAATGCTTATTTCCTT
CCTCTAAAACATCAAATCGAGTGCAAGGACGATTGTGTTATTTTTCACCA
AGGATGTTGATTTAATGTAGCCTTCAACAAAtacaatttcaatatttcaa
gGGAAAAACGAACACTTTGGATTTAGATAATagaaagattttattacaaa
acacATACGCATTAACCATTTAACGactgtgtctttttatttttc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016048TCONS_00016048Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016048-proteinTCONS_00016048-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000225supercontigsc0000225:330153..338147 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.05	0	0.05	0	0.03	0	0.18	0.19	0.14	0.02	0.35	0.05	1.72	1.35	0.47	0.32	0.15	0.35	3.63	4.61	0.89	0.97	0.29	0.5	0.3	0.35	1.63	2.05	0.61	0.36