XLOC_008713 (gene) - C. hemisphaerica

Overview
NameXLOC_008713
Unique NameXLOC_008713
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000214:308497..312673+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008713 ID=XLOC_008713|Name=XLOC_008713|organism=Clytia hemisphaerica|type=gene|length=4177bp|location=Sequence derived from alignment at sc0000214:308497..312673+ (Clytia hemisphaerica)
AAGCGAAGAGTCAAAGTATCAACCAAGAAGTGGGAGGCGGAGCCACAGCC
ACCAATGAGATCTGGGCATTACTAATATGGATCACGGAAAGGTTGATCTT
ATtctattaatttatttttagtttttgattcTAAATTCATCAAATCAATC
CAAAGAAtctgcaaattttcaaaagtactTTATTATGTAAAGATGAATAT
GCATTGATGACCAAatttaaaggccggtctccactgtgcgcgcttcgatc
gcactttttcaaGCAGAGCTTCCATGCTatttggtcaaaagaaaaatgaa
gcaacccCATTGGTGTGATCTGACAACGGTTAAAATAAGTTGAAatatgt
tcaacttttttcgagcgcgcgctataTTTTCATCACgtaatctttttatt
tcaagcaaaaaagattgaagcAAAAAAAGTGCGGTCGCAGCGCAcgcaag
tggaaaccggccttaAGCCTCGtaaaagaattctttttttcCTCTTGATT
CTTCTAGAGTGTTTTCCATCACTCGCAGAATTTGACGATTTTCATTGAAC
AATGGTCTTTGAGAAGCACGAAAGgtatcaaaatttgttttaatagCTTA
CAAGATTGCTTTGTTTCACTATCCCAGATTACATGACGACCTAAGTAAAA
AacaacaagttttatttttattttcagcaaaagcttttcggtaAAACCAT
CTTCAGCATCTAGCACTGAAGATGGTTTTACATGACGTCCTCATCCtata
taattatattttatttagaaaCCTTTTTCATCTTTGCTTTATTCTGTAGA
GTTTGTTGGAACTTGTATAGCTATTGGATGTTTGGCATTTTTCCATGAAG
CGATGAAAGTCGTCCTCCATGTTGTCACACAGAAACAAAAAGCTTGTCAC
AAATCGTAAGTTTGAACATAGCCCGTATAAGAAACCCCgatctggaagcc
ttttgtatctttttattgtttgaaactTAAATTTGCGTTGaaattttgat
catgtgataAACTTTTGAACCAATTCGAAGAGGAGTATTTGGTAACGTTA
TTTTTATAATCGTTACTAACAAAAGAGAAAGtctaacaaaaagttacaac
aatataccctgagtatcagaggttaagttttcaaagaaaatagtaacctc
tgaagacaaataatagaaattttatcgcgcatgtgtcaatctaatcactg
tagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNtgacgctcatccaagatcttggatggt
cgtcatggttacttttgtcttcgctgattgcgcgatgaatagaatctcga
ttcgtcggcacagcgtaaatatatgtttttgagctgtgcttttcacggta
acaacaataggcttccattccagaccagggttttttatacggactatggt
ttGAAAAAGATTCTAGAGATAAACCCCGTTTTTATATTAATGTTTCGTTT
CATCTTAGGTAGTAACTAAACAAACAGGCTCATAACAAGACTGAATTTGA
CATGCACAACGAATTCGAGCGAGGGCCTAGAATAACTAATAAACCACTTC
GTCGTATTTCGCTGCGGCTTACGCTTGTAATGAGCAACCTTTATAAATAA
ACAATATTTTCGTGTACTGTGTCTCGGAAAAGGCGGACGCTTGCTAGCTT
AGGAATAAATTATGCAATGATTGGTACGGAATGTCAGTTTTGAGCCTTTC
TTAGAGTTACAATAATGATAGTCAACGTGACACGTttcttctttataaaa
acatccaatatttttgaagccttcggatgttcttaacttgttgagtttta
agcctgttctttttttcattttgtgagCATTCTTGTCACTTTTCATAAGA
AATCGCAAAACCTTGATATGTTCCTAAATttctatgttcttatatagttt
gttcttataaaaaaagcttatTTTTTATGCCTCCTCCCTAAAAATTCTTG
CTGGTTTGAAGATTAAGATTATTATCTTTCGTTTTCTTATAGATCGATCG
TCATATTAACAATGAACCATGTCAAATACAGGAAATCTACCTTGTAAGTA
CTTCCTGATTAGGACAATAGCAACTATCTTTCTTGCACTATTCGCTCTtc
tttttgcctgcgatggcttaaagcatgACATCTaatccttcgggctttac
aaatcTGTGGATCTGATTTTGACGTTTATGATGGAGAGAGTTTTTTGTAG
CTATACCCCTGTGgtgtactaggtttgcgagatgagGGGTtaaggagcga
tggccaagtggtcaaaggtgTCAGCATCTCAAACCAGGGATTCAcagttc
gaatccccgctccttccaatgttccgttcagttcataaaTAACCGAGCAG
GCTTGCTGTGGACCCcgtaaaaacaatcaaaagactgtctaaaagtctta
GATTAccgggctatccacgtaaaacaTCGACTCTATCCATCTATCTACGG
GTGTGTCCGTGCGGGTATAAATCACAGATTTATAATAAACCTCGAAGGgt
tagatgtcgtgctttaagcaatcgcaggcaaaaaagtgCATAGTGCAAGA
AATAtagttgctattgttttcaaaaatccctgaagcttctgattggacaa
gtgctgaaattctattgtgaTGTCACGTGACCTAAGTAACTGAGAAATTA
CCGAGaaacggcacacttttcagccaaagcacgacatctagccctttggg
cttcgggctttataaatctgtggtaTGAGCCAGATATTGAAaatcaaccc
ttagagagactgaattttgaaaatcttgaaattttttgacgtttttgccg
CCTTTACAGACactttttccccaaaatttctgccaaaaatttcaaatttt
agtacagatttcaaaactttatgaccctttgaggaaATCGAGTTTCGATT
TTCGTAGTTTTGGAaaccttacagagactcaattactttttaatgatttt
tgtacccctttaagggactttcaagggtgtgaaaaagggtcCCTAATGGC
TCGCATATACCTGGCACTTATTTTGCCAAAGAATCCCCTCCCTCGGGAGA
TTTGCCCCTCAGTATTTTAATTTAGATTAAATTTTGTGCACTTTTTTCCC
TTTCTATGtatgtttatgtttttatttcagtCGACTACGGAAGTTTTGTT
GGCATTTATTACAAACGATGATATATACTTTACAAACAATGTCTGGTTTC
TTGATAATGTTAGCAGTTATGTCTTACAATGTTTATATCTTAATGTCAGC
AATCGTTGGCTTTGCGTTTGGTTATCTCATGTTGGGCTGGATAACTGCTC
CCTTTGGtggagatattcaattttgaagtGCATTACTTCTCTGGAATAAC
ATATTAGATGATTAAATAGGATGGTCtgagaattttaaaaacttttatat
tcATAATGCTAGAAACTTTTATCTGac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015617TCONS_00015617Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015617-proteinTCONS_00015617-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000214supercontigsc0000214:308497..312673 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.12	0.56	0.11	0.21	0.15	0	0	0.23	0.23	0.79	3.05	0.21	0	0	0	0	0	0	0	0	0	0	0	0	0	0