XLOC_008706 (gene) - C. hemisphaerica

Overview
NameXLOC_008706
Unique NameXLOC_008706
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000214:10039..13797+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008706 ID=XLOC_008706|Name=XLOC_008706|organism=Clytia hemisphaerica|type=gene|length=3759bp|location=Sequence derived from alignment at sc0000214:10039..13797+ (Clytia hemisphaerica)
TTAAAAATGAGAAAATCTTCTGTCCCTTCATTACAAGAGCAATCTGCTAA
AAAACGTAAATTTTGTACACCATTCAATGGGAATTCTACGCAGAAAGAAC
AAAATTGTAGTTCTGGAACAAAGTTTCAAACACCTTTCAAAGCAAAGACT
GTTGCCAAGGAAACATTGCATAACGAAGAAAGATATGATACTGATGTTGG
GAATGTTAAGAATGTCATAGTTGGGAACACTCTTCCGGAGGAAAACCGGC
GAATAAACTTACTGTTCAATCTTGGAAAACCTCTAATGAAAAAGATGTCT
CTGCAGAGAAACAATCACGTACACTTACCTTAAAGCCGTCAAAACCGTTT
GTAAAACCTTCAAATTCCCGTCCAAATATTGGTAAAACAAAAAGTCTTCA
CAAAACTAAATTAATATCTAGCCAACAAGAAATTTCATCCAAACCAACTG
CTTCAACTGAGGATGAAAAGCACTATGAAGTTCTCTGGTAACTAAACTAA
TTTTGTTAACCTCTTTTGGTTTTATCGTAATCCAGTGTACGTTTAAGAAT
TCCCTGTACGTACAGGTATATCAAAACAAATACCTATTTATATTTTTAAC
GAACGTATTTTGTACTAGTACAATTTGCTTTGCATAGAAGTTGGAGAGGG
TGCTTATTGTAGGTAGTCAATGGTAAGCTGCTTGGAATGATTTTTATTCT
TTTACATAGGTGCAAGTGTTCATCGAAAAAGGTATCTACTTACTTATTAT
CAACGAACTGGCGAGTTCATTTTAGTAAGTGTAAAGTAATGTTTAATGAG
TGTTCTCGTTTACCTTATGATCCTACTAATAATTCGTCAATATTATCTTC
ATAGTAAATAAAATATCACGTATTTCCGAAAGCTATTATCATAATTGATT
CTCCTTAGTAATTTGACCTACAAAATTTGTTTAGTTTTGACTTGAGTTTT
GTTTTTAAGTATCAAAGTTATTTTTTTTAGAACAAAGTGTGGGAAGGCGA
TGGTAAGTGTTTGCTTAGTTCCTACTTTGAATATTCTCACAATTAAACGG
TTTTTAGTTTGGATAGCCATCTTTCGAGCATCCAGCTTCCCTTAAACATG
TCATTTAATTCAACTATAACAACAGTGTTTTAATCTGAAAATAACAGCTT
TTTGAAGTTAAGATGAACATTTCCGATTACTTTCAAGTATTTGGAAATTT
CATTTTTCTTAGGAGTTTTGGTGGTCAAAAACAACAAACTTGCCATTTTA
TACGATACACAGAGGAATCAGTAAGTGAtattttcccaccaaaattaaag
tTCATGAAACAcccttaatttttctttccttcctTGGAAATACCATAAAA
AACCCTTGAATTTTTCCCGTGCTCTAAATACAAAATTATTGCTATGAGTA
CGTTTTAATTTTCCCATTTAACACGGGAGATCCAATATTTTTAAGAGTCT
TGGAAATTGCGCAATGATTAATGTATATGTATTGACATAATCTTGTTTTG
TCAAGAAAAATAGATTTCTTATTTCTTGCAAGACCCTGTTTACTTTTGTG
TTGACAGATATCAACTTTCAACTGtagctttttcttttcctcttttgtTC
ATTTAAGAGTATGTGTCTACTAAAGCTAAAAAGCTGTAAATCAAACTTAA
GTATCAACCCCCGTCCAAAGTCTTCAAAAAACTGCTTACTAAGTTTCATT
TCAGAAATTCCGAGAAAAGCAATTTGTGTGGTACTTGAATTGAGTCGTTT
AGCGCTTTTTTACTAAAAGTACATGTaacattttttatgagaacaaacta
tataagacttcgatggccaaaatattaagcttGGCGggctcaaaaacacc
cgatttcttaggaaaatagataaaaatactCATTGGCTTAAAACATGATC
AAGTTGTAATAAAATTTCACCCTTATCATACAGTGAAATATATAAAATCA
CAAAGTGCTCAAGTAAATATTAATATATTGAAAAGATTCGAGCGAAATAT
TAGAATAAAGAACTAACTTTACACGTGTTTCATGCTGGCACAATCTTCAA
GAAATTTAGTGAATGGTGGATTTAATTGAATTCCAATAcacatattttta
taagaaactccaattttcgggtcaggacCTAGCATTTTAGctcattttgt
gaaaaatttgctttgaccacccATAATACAATTTTAAAGCTTATTGGGTC
AAGAGCTATCGTCTTCCATGGTTAGTTTGTCTAAAAAGCTTTTAGtttac
gagatagtgaaaaaaATGGGTAATTTAAGCACTTGAGCcttatgaaaata
atttgtttAGCGGATTTAAGAGTCTTTAGAGTCACCATGATTTTCTCAGT
AGTTAAAGAGAGAACCCGACGTCTTAAATAGGGGATGAGAGTCCCTTCCC
TTGTCAACACTTATTGATTGAATAACCATCTAttgttcaataataaaaaa
aaggttAATCAGTTCATTACAACTTTAGTCTTCACATTACAGGGTACAGT
ACCGGTGGTTGTGGACCCATACATAGCGCTATGTTTGCGCCCGCATCAAC
GCCAAGGTGTGACATTTCTTTACGAATGTATTATGGGTATGCGCAGCGAA
GATTGTGAAAGTCCAACATATGGTGCAATATTAGCGTGAGTTAGAactca
attttgtttttttttcaaaaagtaggcACCATGGGGAATGCAAAATCAAG
TACACGCTTTTAATGAAAGTCGGTAAATTTTGTCCAGCCTCGACTGTTAA
CATTCTTCATACAGTAATAATCTTCTTACTTATTAGTTTCAAAGCAGTTT
AAAACGTCCTCTTCAGTCtcttgattgattttttttcaattattactTAA
TAGCTTGAAGGAAGCTGAAAACGTCCTCTTCAGTCtcttgattgattttt
tttcaattagtcgttacaattttctttttcaaaaagtattcCACCGTTGG
GGAATGCAAAATGTCAAGAAAcgctttttttatgaaattcggTATATTTT
TATCCAGCCTCGACTGTTCACATTCACAATCTTCTTACCCTATAGCTTGA
AGGAAGCTGAGAAAGTCCTCTACAGTCtctttggttgatttttttcaatt
aatcgCTACTTTGTACAAACCAGTTAATTTACAGAAAATCTTCCATCGTA
AATTTCAATTCATTCTTCGGCGCAATGTTAAAGTGAATAAAGGGATAAAT
TATTACACATCTCGACATGGAGAAAGTATTATCTAGAATAATTTCTGAGG
AGCAATGACCGAATGGTCAATGCGTCAATCCTCGCGCGACTCAAAACAAA
GAATTTGCGGCTTGAATCCTCGCGCCGTTCATAGATAGCCGTGTCGACTG
ACCATGGAGCCCGTGACAAAAATTAAAAGCCTTAGATCTCTGGGCTATAC
ACGTAAAATATGGACTCTATCTACCTTTCTTAATCTTTATTTTAGTGATG
AAATGGGTCTTGGAAAAACAATACAATGTATTTCACTCATTTGGtatatg
ttttttctttctttcaatttatGATCTATAACGCTTTCGCTTTAGTCATT
GTGTTTTCAGTTTTTCAATTATTAGCAGGACGCCGTTCCATTAATTACAA
AGGTATTTTTTGAAATATTCTTTTTCAGGACTCTATTGAAGCAAGGTATT
TACGGGCGTCCGACAGTTAAAAATGTAATTGTTGTCACACCTAACAGTCT
TGCTAAGGTAACCATTTGCTTTGACCACTCTAATCAGCCGTTAAGAGTAG
CCTAGTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015579TCONS_00015579Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015579-proteinTCONS_00015579-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000214supercontigsc0000214:10039..13797 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.12	3.47	2.47	2.32	1.87	1.29	2.95	4.06	2.93	3.66	4.41	2.6	2.49	1.46	3.86	4.41	3.65	5.32	2.91	2.91	3.15	2.78	1.92	3.41	6.29	6.06	1.44	1.12	1.84	1.21