XLOC_008584 (gene) - C. hemisphaerica

Overview
NameXLOC_008584
Unique NameXLOC_008584
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000210:187904..191607-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008584 ID=XLOC_008584|Name=XLOC_008584|organism=Clytia hemisphaerica|type=gene|length=3704bp|location=Sequence derived from alignment at sc0000210:187904..191607- (Clytia hemisphaerica)
ATTTATAGTCTTTTACTACTCTTTTACACAAAAAAGTCTTCTATTTTAAT
GGAGATTAACTTTTGTCCACGTTTATTTGTCTGAAATCTTAAAGTTACTC
AAACCAAACAGCTAAAAATGGAAAACAAAGAAGATGAAAAAAAAGAAGAT
CCTGTTCTTAGTGATGAAGAAAAAGAAACAATTTGTTTATTTGATTTCCA
AGAAGAAAAATGTGATGCTACTTTCATCACCAAAGACAAAAAGTTGAAGT
TGCCATCTTCCTTCTTGTGTAACGTCTCCCAGGCTTTCAAAGAAGAATTA
GAAAAACACAAAAATGTGATCTCTCATGGTAACTTTAGCTCAGAGGTTTT
GATAGCTGCACTTTCATTTTACAGACCAAGGTTTTTTGCTCAACATGGAT
TTGATAAAGGTATATAAATCATAGTACTCAATAGTAGGGGGCCATTCTTT
AGGACCCGTGACAATAATTTCCTGAGTGGACTTTTTTTTGCTCATTCGAA
AGAAGAATGTATTTAGAAACTTTTTTGAGAGGGAGTAAATTAATTAGGTC
CAGCAATTTTTTTTATGGGGAAAAGACTGACGTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNCAAGCAAAAACCCTTGGGACCCGAAATTTGACGAAATTTCAAAG
TCGCTAAAACACAAAACCACTTATACCATTGGAAAGCTCTCGAAAAACGA
TATAGAGGACTTTTAAGCAGATATGGTCGACTTCTCAACCTAACTCTAAC
CTATAAAAATTAACGTCAAACATTGAGAAAACGTCACTTTGGCACCGTTT
TTCTCGAGTTACGTTGAGAAATCGACCATATCCGCTTAAAAGTCCTATTT
ATTGTTTTTCAAGAGCTTTCCAATGGTATAAGTGGTTTTGTGTTTTAGCA
ACTTTGAAATTTCGTCAAATTTCAGGTCCCAAGGGTTTTTGCTTACGACA
TCAGTCTTTTCCCCATAAAAAAAATTTCTGGACCTAATTAATTAATTAAA
AGAAATTCCACTCCGAAAATTGTTGTCACAGGTCCTAAAGAACGGCCCCC
TACTATAATACATTCTAAATTTAGTTTATGTATTTCTCTTCATTGTGTTT
ACACGCATAAGACAATATTATCAGATGTGAATTTCTCTATCAGCAAATAT
CAAAAGGAGCTACTGTAGCCCTTAAGGAAGTATAGTGTAATTATAGGATT
CCACTTTTTCAAAACAAACTTCTTTTTTTGTCTTACCATGAAGGTAATAG
AAATAGATGGAGAGTCGACTATTTCTTCTCTATTCTGATTGATCATTGGA
AGCAAACGGCTCTTTGAGTTGCTTTGGGAATAAGATAATTAACTTTGCGT
GTACTCGTGGGAATAGTTAAGATGATGAAATCTGAATGAAAATACATTAC
ATTTTTAACAAGCATATTGAAAGGTACTAGCCTTACCATAAAAATCAAAA
AAAAACTTGCTATCGTAATCACAATGCCACAAAATTCTAGGGGTTACTGC
ATTTAAAACCATCAACAGATTTAAAAACAATATGTTATGATTAGGAACCT
TGTATGACTCATTTTTTCAAAATTAAAAACTGCTGCCCTTTTGTAGGTGA
AGAGTTTGAAAGAAGAAACTTTCAAAGAAAGTGTGATGAAACACTCATAA
TGTCGGCCTGATAATGTATCTGTATGAAATTACTTCTTTCATTAAAAGCC
ATACATCAGTTGAAATTATTTCAAATTGCATTTTAACAATTTTCTGCAAA
AATAAGTTTTTCAAAATCAACCAAAAAGCTTTTCTCTGTAGCCTTTTTTT
TTAAGTTATAAATTTGTGTTTTTTTTGTTTCAAATGATGTAACATCAAAG
GAAAGCCACTTTGAATAGATTTATAAAAGATTTCAAAGACCATGGAGACG
TTTTCTCTCCATCTATCTTTATTACCTTCAATGTCTTACACATGATGCTC
AGCTGTTAGAACACTAGGATTATATCAGATAGTCAAATTCATGATTATGA
GCATATTATTTTCAAATTGGTAGAATAATGTTACTTCTTAAAATTTTTTT
TTTCAGATAAGCTTGTTTTGGGACAATCAAGATATTTATGCTGGGATATA
CTGTCCTTTTGTACACAGTGGCAGCTGACTTCATTGAGTGATTTCATCGA
AGAATCACTTGTCAAAAATTTTGAAAAGTTCAGTGGTAATTTGACTAGAG
GAGATGTACTCTTTATAAGAATGGCAAATGCATTTAACCTCAAATTACTG
CTATGCCTTTTTATGAACAAGGATCCTTATGTACCTCGACCACGTACTGC
TAAAAAAAATCTCATGCTTGCAAATGTATTTCAAAATCTAGAAAGGACTT
TAAAGTATGAGATATTGAAGAATACCATTATGCGCGAAACTGTTCATATG
CCAGGATCCAAAGAATTCTTGGAGCTCAAAATCATTCTCAACTTCTTAGA
TGCATTGATTTATGAAGATAAAATACTGGATAATTCGACTTATAATTCAA
GAAAACGAAGATTTGAATGGGACTTTAACTTTAAGAATAGTAAGAAACAA
AAGACCAGCTATAATTCATTTCAAATTAAAACTCCAGCTACTGATGTCCA
ACTCCTTGTTGGTGATGTGAAACTTTACGTCAATTCTTTTACGTTAACAG
AGAATTCACCAGTTTTCAAAGTTATGCTGCAGTCTACATTTAGAGAAGGC
CAAGAAAAGTTAATTCAGCTGCCTGGAAAGAATGTCACAGAAGTGGTTTC
CTTTCTAACCTTCATGCTTTATCACGGAGAAATAAATCGTAAGTCAAGAA
TTTTATTTTTAAAAGTCTTATTTTCTGCAGATATCTATAACATAAATTTG
AAAGATTTGTTGAGTTCATCATTTTATTTTGTACTTTAATTCCAATCAAA
TATTTGTATATTGTTGTAATTTTCATTTCTTTTTTAGGCAATACAGATAT
TTTCTCCCTTTGCAAATTATGCCATGAATATCAAGTGGATTGGCTTTCAG
ACAAAGTCATGGAATACTTAAAAACATTCATAGTACAAGAGAAACCTCAA
TATCAATCTCAAACCATCTTCAATTATATAAATCTGGCTGTTTTCATGCA
ATGGGAGATTATTGAAAAACAGTTTCTTGATCAACTAACTGACTCATTTG
TTATGCTTCAAACTCTATCTGAATTTAATGCTCTTGATTTGAGATTGAAA
GTACTTATTGCACGGAAAAGATTATGGGTTTTATTATCAGGAAAATCATT
GGATAAAACATTTATCGAAACGCTGTTGAATACAAGAGATTTCGGGATGT
TGTCAGTATTAAGGAACTATCAACAAGACAAGTTGTTTACCTTGGCTGAA
GCAAAAGTCACCACAGAAGGTTGTTGCAAACTTACTGCAGATGTTCCTGA
TGACTTATTGCCAGACTGGTTTGATCACGAAGAAGATTATTAGTTATTTA
GAGTTATTAGTTTTGCAACCTACCTCATCCTCCATAAGCTTTTCATCTTC
AGATTTAGGATTTGTGACTTTTAATAATGTGAAAAAGAAATTTACACAGT
GAAATTTGTCGTCATCATCAATCTTCTAACAGTGCTTTCATTCAAATGTA
AATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015358TCONS_00015358Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015358-proteinTCONS_00015358-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000210supercontigsc0000210:187904..191607 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.36	9.56	5.53	5.68	7.33	4.61	4.45	5.69	2.56	1.64	2.2	1.52	1.79	1.69	1.41	2.2	2.17	2.24	0.87	0.77	1.27	1.29	6.69	5.9	3.64	4.91	1.16	0.91	2.68	3.81