XLOC_008272 (gene) - C. hemisphaerica

Overview
NameXLOC_008272
Unique NameXLOC_008272
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000198:336013..338282+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008272 ID=XLOC_008272|Name=XLOC_008272|organism=Clytia hemisphaerica|type=gene|length=2270bp|location=Sequence derived from alignment at sc0000198:336013..338282+ (Clytia hemisphaerica)
CGCAAAACAATCTTGAAGGTTTCTTCATCTTTTGGTTTTGCTTTTGTTTG
TCTTTAATGCGAAAGTGTATTGTTTACAACAAGGAAAATGCGAGCATCGC
TACTTCTTATATTCCTGGCTTCGATAGGTATGTATTATGTCATACTTTAG
CAAACCAAAAACTTCGCGATTTGCGCGTGTTTTGGTCTTTTTCAACCTTT
TGGAGCGATTTTATACTGTCATGAACATTCCTCGGATAGATACAGGCTAC
TTTCAATTAAACTTNTAGGTTTCTTCACCTTTTGGTTTTGCTTTTTATCT
GTCTTTAATGTGAATGTGTATTGTTTAGAACAGGGAAAATGCGAGCATCG
CTGCTTCTTGTCTTCCTGGCTTCGATAGGTATGTATTGTGTCATACTTTT
GCAAAccaaaactttcgcgatttgCGCGTGTTTTGGTCTTTTTCAACCTT
TTGGAGCGATTTTATACTTTAATGAACATTCCTCGGGTAGATACAGGCTA
CTTTCAATTAAACATTTAATGTTTATAACCTACATAAATGGTTTAATCGA
CtttctgtgtttgttttttttagttttggtcAAAGCTTCGAATTTCCGTT
ATGCGCATGCACCAAGAGAATACAAAGTTCCCGGTCAACCGGAGTTCCAC
AACAAACGAgatgaaattcaatggaaactAAACTACGCTCAAAAGACACT
TGCTAAAGCcagagaaattgaaaaattagctAAAAAAGCAGCCGTTCATT
TTGGATATTATGATGGGAATAAATCCGGACATAGCACAGTGAAAAGCATT
ATCGGACAGGCTCAAGATGTTTTAATGGACGCTTCAGATAAAATAGGATA
CTCTtacgaaaaattttaaatcaattcggacattgattattttgaaactg
TGCCATGCTGTTTATTATGTGTTGTAACTTTAAAGCAAATACGAAGGAAG
ATGCCGATATTGTCAAAGAATAGCTGACTTGCTGCCAATAAACTGCAATT
CGGTCATTTGAAGTATTTTATACTTTTGGACTCTATTGACATCTTTATTA
TTATAAAGAATACGGTTTCAAGCCCGCGTATATCCTCTCTAAACCAATCT
AGCAATAGATCTTTTTAATTTcagacgacggtaaaaacaccaaaataccg
ccctctgtttaggtgagcaaagacgatatagagccgtacatcaactattg
actttgttttgtatcatttcacttaccgtcgccctcgatatcctccgata
cgtAAACTCGGTAATCACTGCCCGACGATAGTACTTCATTTCTCACATCG
GCTATCTTTCGTAACTCTCTCACTCTATCCCTCTCCATTTTAATCAAATC
ATCTGTTATACTGATCATGTCGTATTTCTGATGTTTTTTCAATTCCGTCA
GTCTCGTGAATCTGTATTTCCATCATTGAAAATGTTCCATGCTTCCTCTG
TTCTTCTACTTACTCTTCTACTTTTTCGCTCCGAATCAATActttatatt
ttgaatatttatttctCTGTGTGTTCTCGTGACCTCAGCAAAACTTTTTA
TTGATTGGCCACTCcttgtttggtcatttttggcATTTACTGCATTTCAA
TTTTTGTGGTCAATTTCTTTTCCAAGATTACATTTTTTCCAGTGCCTAGG
GGTTTTTAAGGTTAGTGACAATTGGGTCTTTTCCCGAAGGGATCACTCAG
GCAAAATAGGATACGGGGACGCACCGCTGGTTAGGTTCCCTTTctcaagt
tttgaaaatatcttaCATGATCACTGAATATTGGAAGTTTTATCTGGCAA
GGTTGACTTTTGTTTGGACGTTGCCACCAATTATCAGGGTTGGCTTTAGA
AAGTGTTgcatctgacagggtccataTTTGGTTGAACCTTTTTCGATGGG
AAAATCACTCGGGTCAGTCACTCTCTCACTTCTAGGTTCTTCCTTTTCAA
TTTCTGATTTGACTTTAATTTCTATGATTAgtcattaattttttggatTC
ACCAAAAAACATGATATAaagaaacaatttcaaaattttgatatataCTG
TAAGCTTAGCTAAGGATTTACGAATTAGTCATATttctatgtaaaaaaat
gacgctcaaaatttaaaaggatTTAACAAAAGACATTCCTCTACGTAACT
TCTATATACTCAAGGCGCAAAGGGGGTccagtttaatttttccatttCCC
AATAGGAAATTTTTAAATGAACTTTAGTTAAggaactaaaataaaaacta
ttTCAACAATtatatcacag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014779TCONS_00014779Clytia hemisphaericatranscript
TCONS_00014780TCONS_00014780Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014780-proteinTCONS_00014780-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000198supercontigsc0000198:336013..338282 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.88	0.99	0.83	1.04	0.93	0.47	7.73	8.75	6.15	3.65	9.96	7.52	10.44	9.58	7.83	14.86	12.15	11.9	1.73	1.2	7.6	6.12	4.63	4.18	6.82	9.73	1.36	1.62	2.17	1.74