XLOC_008169 (gene) - C. hemisphaerica

Overview
NameXLOC_008169
Unique NameXLOC_008169
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000190:274764..281724-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008169 ID=XLOC_008169|Name=XLOC_008169|organism=Clytia hemisphaerica|type=gene|length=6961bp|location=Sequence derived from alignment at sc0000190:274764..281724- (Clytia hemisphaerica)
GTTTGCTTGAAGATAGTCCATAACTGGATTTTGCCAGATCGGTCTATAGG TAATAACTCTTTATAAGCAAAAATAAATTGTATTAAAAAGAAAGTCTTCA TTCATTGACCCCCACATTTTTCTTTGCATAATTTCTACCGGAAATCGAAA GTAATTTCATTTGACTTGTGATGTTAGAGAGCTTGGTTGTTGGGAAGCTG CAAGAATTTAAAGGTAAACAAATTTCTTTGTGAAAGAAAAATGAACGTTC TGCTAGCCTTGTACATAAACACAGCAAAACACTGGGCCGTTTACTTTAAA TTTCTGATAAATTTAATTTCTGCCAAATCGATATTATCCCGATTATCCCT GTTCTCTTCTCAGATTATTTCCGATGGTACTTCAATTGGTTTACAAGATT GAAAAATGGTTGACAATAGATCATGATGTATATTTATGTGCCATGCTGTA GTAGGAAAGAGAAAAGAGGTAAGTCTAGCCTAGGCTAATTGGGCTCTTCC AGAAAAAAATTGATATAGGGGTAGGCTGACAGGGATTTTCAGATAAAAAA AGCACTCGGAAATCCAGTCAATTTTTTAAAGTGCTTCGGAAATTCCGCTT TATTTTTTATTTGAGCCATTGGAAATTCCACATAATTTGTCAAAATCTTG AAAAAAATATTGGAATTCCCAGATTTTTTCACCAAAAAATTGATTTTGAA TACACCGTTTAGGAGTCTCGCCATTTCACGGTACTCCATTGCAGAGGCCC GGTAAAAATGGTAGGTAAAAATGCGCACTTTAGTACTGTGAAAGGTTANN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNCGTTTTTTTACGGAGGAGAGTGAATTTTCCGTGATCGCTAA AATCAAAACAATGGAAAATTGGATTGACACGTGCGCAGTCGACACTCCTA AACGGTGTATTGATGGAAATTTGATAAGCAGCTGCAAAGGAGCACTGGGA AGCAATCAGTAGAATAGACCACTTTCGTTTTTGTTGCAGATTTCTATAAA ACTTCTCTCAGGGATTACTTGTCAATGTACATGTACACATGTGTTGTGTC AACTTGTCAGCATTGTATTGTTGTAAAGGAAAAGATAAAAGAGGTAAGAC TAGCCTAGTTTCTAATCCTGATATAGGAGTTTAAGTTTAGACTGTCAAAG CCTCATGCAACTCAACCAAATAGAAATAGAAATAGAAAACAGAAAACTGT CAAAAGAATATGAGAGCTGATACAAACAAAACACATGGTGTTTCCCAAGA AAATCAATTGAAGAAAATCAACAGTAAGTAAATAAATACATCGAAAACAG AATATTTAGCTTACAAAGACAAAAGAGAACCAGCCCACCAATGAAGAACT CTGGTCTACATACCACCGTCACTGAGCACCGTGCAGTCGGGTAACTTGCA TCAGTGCAGTGAGTGGAGGCTAACATGCATAGCCTTCAAATGAATGACCC TGGATGGCATGGCCCATGCCATGGCGGGCTGCGGTCCTTAAAATACAAAG TTAAATAAAAATAAAAATGCTAGAGTAGAGCTGCGAGCGCAGCTACATAG TTCATTTGTTTTGACAATTTCTTGCTTTGGCATTTTTGGTTGGTCAGTTA TTTGAGATGCATGTTAGCCTCCACTGATGCAAGTTAACTAACTTCACAGT ATCTAATTAATAGCTTCATTATAAAACTGAAAGGCAGTATCATACATGTC TAAAAAGTTCATAATAAAGCACTTTACAAGTTGGATGAGCTCATGAAACA AAAGCTGTAATAGGTAAGTACTTACAAAGATTCAATAACCTTTTTAAAAA AAAGTGCTGGTGTAGTTCATTCACTCGGTATAATGCGCCATGCGCTCCCG CTAAAATCTTTCACGGCTTTATCTACCATTTTGGATTATAGATTACTTTT GTTTTCGGAATTTCCGAGGTAACGGGGTGCGAGGGTGCGAGGGGGTGCGA CCAATGAAGTATAAGCCCGAAGGGCTAGTAGTCAATCTCTTTGGTAGGAT TTGAAGCCAACAAATCCTATCAAAGTTGCGCGGCCTTGAACGACCCGCCT GGTTTTTACACAAATGACAGATTGAAACTAAAATTTACCGCTTAATTTCG AAAAATATATCACTCGAAAACAAAGGAATTGCTATATTCAATCCGTCATC AAAAATACGGCGCATATTTTAAGCTTAAGGCTTCAATTTTTCTTGCCTGA GAAAGGTTAGAGATTGACCTCTAGCCCTTCGGGCTTGAAACTCAATGGGT GCGACACGACAGGAGAGGCAAAGGAGGGGTAAATAAACTATCTGTGTCCC TCACAGTCCCCGGGGGGGGGGCACTCGATCTGAAAACGACCATCCGTTCG GCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGCGTACGGTATTTCGGAA TTGCGGAAATTGACCCTTTTTTCTTCGGAATTTCGGAAATCGGGCAAAAT TCCTTCGTTCGGTATTTCGGAATTCTGAAATTGTTTCGGTATCGGAAATC CATGACATTTTGCTTCGAAATTTCGGTATTATAAATTTTTTATCCCCCTT TTTCGGTATTCATGCATGAAAAATCAAATTTGATGAAAAATTAGTCAAAA CGAGGAAAAATACCCAAAAAATCGATATCGGAATTGTAAGTATTATTTTA CGGAATTTCGGAAATTTTGGCAAAATTATTCGGTATTTCGGAAATTGCAT ACCCCGTACGCCCCCCCCCCCTGAAAATGCATGAATTTCCAAGGTAATTG AATTAAAAAAGACAAAAAAGAGTGGAATTTCCGATGCATTTTGCAAAAGT ACATGGATTTTTATCGGAATTTCCGACCACTACTGGAAAAGAAAAATTAT TTCCGAGGCTAGAAAAAATTAAAAAATGCACGTCGTCCGCCGACGGGGGG TAACAAAAATTTTCTGGAATGGCCCATACGTTCGGCCCAAAATTTGGCTT CCAACACCCTTACAGTGCAGTGAATTTCCTTGAAAAATCATACCCTTACA GTGCATTTTTTCAAAATTTGTCGCCTGTAAGGGCGACAATTTTTGCACAA GAAAGTGTGGAATTTTTCCTCCAAAATTGATCAATTTTGTGCCAATTTTA CCAAAAAATTGGCCTTTTATCACGATTTCCTACCCTTACAGTGCAGTTCA GTGCACAGTTTTTGTAATTTCCTACCCTTACAGTGCACTAGCTGAACTAT GAAAAACCTACCCTTAAGGGCCGAACGTCTGGTAAGTCATTTACCTTGAG TGCCCCCCCCCCCCGGGCCCACAGTGTCCTGGGAAAAAAGAGGGGGTACT TAAAGAACAAGGGCAGTAGAAAAGTCTAAATATATAATAGAGATATTAGA GATGATGTTGTTCGAAGAAGACACTTTTGTTGATAAAGTGTCGAAATATA TCAGTTTTTAATTATCCTTTTTGGCCATCGAAGTTTTATGCAATGTTCTT ATTTAGTTCTTATGAAAAAACGTGTACTTTCATCACATTTATTTACCGCC ATGCTAAATTTGAGATTACCCATTTCTATTATATGGCTATTATCATGCTT CCCGTTCGAAATTGACCCTTGACCCCCATGGGTTTTCAAAGTCTATCATT GTTCGCAATTAACTTTTTGATCACGTTTAGGAATCATGCTTTCATGTGTC AAAACCAAGATCTGCTTGATGATTGGTTGGTTTTGTTTTCTGTCGTAATA TTCAAAATGGCGTCGTCGTGCCGCTTGCGTAAGCAGAGAAAATCTGAAGC AGTGGGCTGACATTCGACGTGCCATGAAGAAGAATAAGAAGGAGGACATT ATGGAGATATTATGACATATCATGCTACCTGCATTCAGCAAGGAGTATAC CATATTTTAAGCAAAGAGATGAGTTGTAAGATACCAGTCATTTTGTAGTT TTTTTTGCCTCAGGAAAATGGTTGAATTCGTTGTATCGGAGTGTCCAACA GTACCGCTGACAAAAACTCAACACGGACATGCTGTAATTAGTAAAGACAC TTTAGATATCAAAACAAGGCAAGATCCAGCGATTTTACCTCTAAAGTCAT GCATCCAAATACCAAATCCTGATGGAAGTGGAGAAAAGCTTAATATAAAG AAGGCGAAAAGTGTACATTTTGCTGATAGCTTGGGTAAACCTTTAAAGTC GGTTAAGACCTTATGTGATCTTGAGGATGATCTGGATTTACTTTTCCTTG GTTTGAAAACAAACTACAGTTCTACCCGAAGAAGTTTTCCTGTAAGAGAT AAGAAAACATCCCAGAAGTTTGACTTTGTCAATTTTAAACCACCAATTAC TGAACCAAACTTTCTAGAGCGTGTTCAAAAGGAAAATGTTTTATTGGAAA ACATCTTTGTTAAAGACAACAAAGTTCTTGGCACTGTGAATGTGAAAAAT ATTTCCTTCGAGAAAGATGTATCAATCACTTATACATTAAATGACTGGGA AACTGTGCAAAATGCCAGAGGAAAATATGTTCCCGGATCCAGCACTGGGA CGATTGATATCTTTTCTTTTGAAATTACCTTTCCTGAAGACACTGCTTGC AATATCAAATTCGCAATTTGTTACAAAGCAGCCAAAAAAGAATTTTGGGA TTCTAATGAATCTAAAAATTATATCTTGGCAATCAAAACCAAATCTCCAA AGAAGAAACTAATAGATGATTCTGACAATTTTAATGGGTTTATTATTTCC AAACAAAACTTTATTGGCTGGGCATCATAACACAATGAAATGATTAGGTG ACATTAAAACTGATATAATCACAATGTTTGTCTTTAATTTGATCTTATTT AGGTAATGGACATAAGTTTTATCCTTTTTGGATACAGTAGATAATAAAAA GACTTGATTTTATAAATCTGAAAAAAAGAAGTAGCAGGCCATTTTTCATG CCCTTTAAGCATCCGGTTATCGGACGCTGCCCCTCTTGAAATTACTTAAA TATTGGTAAAAACAGCCTTTTTAGTAGAAAAACACTGGAAAAAGTGCGTT TTGTTCTGTCCAAAGACCACTTTAAATGTATTCAGAATTTATGTTATTGT TATATTGTTATGTGGTATCTTTCAAGATTTTTCGATAATTTGTTATAGTG AAGTCTGTTAGCACATAAAAATGTAAGAATACTTCAGATGGTGATAAAAG CATGAAAATTGGCACCGATGATCCTTAGATTTTAATTTTAAACAGTAACA CCAAATTCTGCCACCTGGCTACCTGCCAGATGACATCATCAGGTGGCTCG GCAAAAAATTATTTTTTTGAAAATATTCAACATCTGATGGTTCCAGCAGA AACAGCATGAAATGCTGATGAAAATTGAGGTATAAAACATACCTTGAAAA TCTTCCTATCAAAAGTTATGAAGGTTTTGAAAGTTTTGTGATGACCTCAT CAAAAGCCTTTTTAGGCAAAACTTAAACACCTCCTATTTTTTTAACAAAT TCACCAAATTTGATTTGATTTGATGTATTTAGTATTCTTGTCCTAACTAA CAGACCTCACTATTAGTATGCACAGAAATATGATACCATGTTTTTGTTAC CAATTTTTAATTTGTTTTTTTTTTCTTTATATTTTGACTGGAAATGTATG ACATTAATTTTTTTCCAATTATCCACTTGATTAGTTTTGTATTACAATCT TTTTTAATTATTTCATTTTGACAATTATTTCAATTTGACAATTATTTCAT TTGACCGATTAATCAGTTTTTTTCCAGAAATTTATACTCGAAAACTTCTT AAAAAAAGATATATTTATTGAATTTTTTTAGACTTTTTTATTTTAGTATC ATCAACGAATTATTTCATATCATAGTATTTAGATAATTATAAGGTTTGTG CACATAGTATATGATATGGTTCTTATAGGAGTGAGAAGATTTTTGTTTTA GAAAATAACATATTTCATATTACAATCATAAGTTATATCCACCTTGTATT GTTTACCACAATAGACCTGTCTTCTTTTTGGAATTGATTTGTTATGTTGT TTGCTTTAGATAGTTTGAATGTGCATTATTGCATATTTTCACTCGAAACT GAATGCTGCTTTTATTGTTTGACTTTTAAAAAATAGTATCAAATTACCTT TTTCTGTATTTGCCACTTCTTGTATCCTGTAATCCTAGTATGCACTCTTA TTTTCTTTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014603TCONS_00014603Clytia hemisphaericatranscript
TCONS_00014602TCONS_00014602Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014603-proteinTCONS_00014603-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000190supercontigsc0000190:274764..281724 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PPP1R3Bprotein phosphatase 1 regulatory subunit 3B Homo Sapiens
PPP1R3Cprotein phosphatase 1 regulatory subunit 3C Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.8 6.34 2 2.02 49.35 33.12 39.2 35.33 26.04 34.94 13.84 15.68 4.96 3.41 4.39 7.78 6.12 5.46 3.63 4.5 6.05 6.13 10.59 11.53 3.86 4.74 14.88 9.26 14.44 10.97