XLOC_008168 (gene) - C. hemisphaerica

Overview
NameXLOC_008168
Unique NameXLOC_008168
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000190:236362..240274-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008168 ID=XLOC_008168|Name=XLOC_008168|organism=Clytia hemisphaerica|type=gene|length=3913bp|location=Sequence derived from alignment at sc0000190:236362..240274- (Clytia hemisphaerica)
TGAAAAATTCAAATTAAAAACGATGCCGAAAGCTGCAAGAGGGAAAAGTG
GCACAACATCTGAGGCTTGTAATTGGGAAGCTGAATTGGCACAAGCTGTT
TTTCAAGAGGTAAGTTTGGTTTTATGATTTTTTACACAACCTCAGCCCTG
TGAATTCAGACAAAATCATATCGACACTTAAGTGCCGACCAAAACCGGCA
CACAAAATTTTGCCGACCTAGAGGTCATTTTAGGTCGGCAAAGCCGTCCT
AAGTAGCTTGTTTAGGTCGGCAAAGACAATAAATTTCCTACAGTTAGTTT
AACTATCCTTAACAATCATCAATTAATAAGATGGAGGAAGTCAAAAGGCT
CGATTATCATGTGTTATCAAATGATAACACAATTAGACTAACCTAACAAA
TAATATTTTTCCTCTTTATCTCGGCTTTGCCGACCCAAAATATTTCTTTT
GTCGGCACGCCGACCTAGAGTGTAAATTACGTCGGCAAATAACAGCCGAC
TTCAGCTCAAGTTACGTCGGCTTTCAGGTCTGGATTCACAGGGCTGCAAC
CTAAAATAGCACGCATGTTTAGTGAGATGTGAAGTGTAAGTAAAAAATAG
ACTTGTCCAAAACACATTTGTATGTGTAATGCACCTGCTATTAAGGATAA
AAAAAGTTATATAATCACATAATTTTATTTCAGATCAGCATTAATACCTT
GAAGTATATTTTTAACATTTTCTTTTTATGGTCATTGTAAATTGTTGAGC
CTTTAAAGAAATCTGGCATGATTGAAGTCACACTATTGGTCTCCAGTCAG
GGGGGGGGCAAGCAGTTAGTACAGAACACTATGTGTACTAACTGATTTTT
GGAAAAATCTGTACCCCACCACCACCCCATGTCACTTAGTACACCGTGTA
CTAACTGTCTTTGACCTTGCTCAATATATATACCACCCCCCTAAATAAGG
ATCCGTCTCTCTACGGTGCATTCCAGGTGAATTTCACACCCCAGGGAGGT
TTTATGAGGTGTATTTTTACGTTTTTACCTGTCTTTACCAGGTTTTTACC
ACTAACTACTTTCAAACAAATAAAAATATAACAAATTATGGAGTAGGTCA
ACCGCAGTGGGGGGAAGAATTGATGAATAATTTTTTTTTCAAAATGAATA
TTTACCAGTTAGTCAATGAAAACACTAGTAAACCTAGTTAAAGTGACAAT
AATGACTTTCCAGAAACACTTTTTAGACAGAAAACACAAAACACAAAACA
GAAAACGTTCGAAAGTTCGAAATTTTCAAATTCGAATGTTTTATTTTGAA
TATTTCTAAGAGTTCTAAGAGTTCCTAGAATTGTAATGTCATGTGTCAAG
CTGTTAAAAGGTATTCCTGACTGTCCTAGNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNACACTGGTGTACTAACTGCATTTTGAAAATTTGAAAAAT
GGACCCACCACGGTACTAAGTGTCATGGGTGTCGTGTACTAACTGCTTGC
CCCCCCCTGCTCCAGTACTCCTAGCCATACAAACTTTTGCCCCGAAACCA
AAGTTGAAAAGATAAAGATTTATAAAGTTTATAATTGTGTCACTTCACTA
AGTTATGAGAAGGGATGTGTAGGTGTAATTTGACTGACTAACTTTGGCTA
TACAGACTTGTAATTTAATTTTTTCATTTATTTCCTCTATAATAATCCTA
AAATTTCTTTTCTTCAGCCTGATTGGCGACCATTAGTGTATTTTCTTGGT
CCACAGCAATATTCAGATGTGGCTGTTGTCAACTTGTTGAGTGATACCAT
CAAAACTGGTGTCAGAAAACTCTTCAATGTTGTTGATTATTACAAATTGT
TGGTGGAGGTAAGTCCTTATTTTCAATATTCGTTCTGTTTAAAAAAAAGG
TTATCAGAACTGGCCTGAACTGAACCGACCTTTGAGTTAAGTTTTTACTA
ACAGTTGTATTATGTATATCATGTAATTATTGCATGAATATAAATAAATA
AGCTCTTTTAGGTTTAACTTTGGACAAAAAATACCTTTAACTCCATACTC
ACTTCTTAGCTTTTAACATTTTTTTAATATAGGCAAAAGAGATTGCTACC
CAAACAAAAGGGAGTAAGGGCAAAGGCGTTCCAGGAACCAAACCACAGTA
TTCAGAGATTTGTGAGCAAGTCAAATTATTGTTGGATCAAGGCGAAAAGA
TACCTGTCAACACACTTGCCAAGCTTATCAAATTCAAGTTGTTATCCATT
AAAGCCAGTGACATTGAAAGAAGAAATGCTGAAAAGAAGTTAAGTAATAT
AATGTTGAACGGTGAAGAAGAATGCGGCTATTATATTTTTATTTTCCCCA
ATATTCCTAATACTCATAAAAATTTGCAATAAATATTTTACTAGTCTGAA
TAAAAATGAGTCAAATACCTTAAGGAAGAAATCTTCTTCTTAAATTCTGC
GAAACACAAATATTCTCAGGATTAAAAAAATCACCTCTAAAATTGGGTTT
TTAATGGCAAAATAGGCCATATATTTTAATCAAAAAATTCTCAACCACGA
AAATTAAATTCCACGAAACTTCAGAATTTTAAGCTTTGAACTGCGAAATC
AAATTTCTTCCCTTGGTAAACATACTCAAAGTTTCATGCCATACAGAATT
AAAAGTTTATCTTCATCAGCTCTTGTACTACCAGTCCATAGTTAAAAAAG
TAGGGACTTCGTTATTCTGGTAGATAATATCCTATGCTGTCGTGTTGATT
CGTCGTCCGATTTAGTTTCTCAAAAAATTATGTATATGTATTCATTTTTC
AGTTAGCTTCTACAACTATATCAAAACCAAAGCTTGACCAAAGTGCATCA
AAGACTGTCAGTCCAAATAGAGCGCGATCAGCAGGTTCTCCAGGAAAAGG
AGGCAAGAAAGGCGCAAAGAAAGAACCAGAAAAACCGTTGTCACCCAAAA
AAGAGACCAAATTAAAGAAACGTGGCGAAGAAAGTGAAGTGATTGAATAC
ATTGGTAAGTGGAATTCTTTAGATAAAGTGGTTATTCGGTATAAAAGGTT
AATCTGAAAGATTTTTTAGCTTCTTGATCTATAGCTTGAGCTCAAGTCTT
AAGTGGGGTGGTTTATGTGGAATTAACAGTTTATTAACAAAAATGTAACC
CAATAAATGAAACATCTAGTGGCAGACAACACTATTGTTCTAGTTTTTTC
TTCTAAAGGCGTGAATAACACTCAAACAACCCTTTANAACCCAATAAATG
AAACATCTAGTGGCAGACAACACTATTGTTCTAGTTTTTTCTTCTAAAGG
CGTGAATGACACTCAAACAACCCTTTATCTTATTGGAACTTTTTCTCTTA
TTTAAAGGCTTCTGAACTCTATAAAAAACTATATGAACTTTCTAGATGAA
GAACCTGTCCTGAACTCTTTAAACTCTCTAGATGACAAACTTGAACTCTA
TGAATTTTCTAGATGACAAACCTAAACTCTATATAAATTCTCTAGATGAC
AAACCTGAACTCTATATAAATTCTCTAGATGACAAACTTGAACTCTATAT
AAATTCTCTAGATGATAAACTTGAACTCTTTATAAATTCTCTAGATGACA
AACCTGAACTCTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014601TCONS_00014601Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014601-proteinTCONS_00014601-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000190supercontigsc0000190:236362..240274 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.08	2.48	4.02	3.75	37.18	29.2	13.01	14.11	5.65	8.5	4.58	5.82	0.87	0.74	0.59	0.9	0.75	1.31	0.71	1.08	1.46	1	0.61	1.5	26.4	17.53	1.24	0.83	0.52	0.57