XLOC_007992 (gene) - C. hemisphaerica

Overview
NameXLOC_007992
Unique NameXLOC_007992
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000185:220524..225001+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007992 ID=XLOC_007992|Name=XLOC_007992|organism=Clytia hemisphaerica|type=gene|length=4478bp|location=Sequence derived from alignment at sc0000185:220524..225001+ (Clytia hemisphaerica)
AGTTAAACCACGAACATGAAAACAAACCAGCGTCGATAAACTCAAAATAG
TAGGCGGGAAAGAGATAAAACCAGAGAAAGCTTGATGGTTGGCTTGGAGA
AGTGGATAAAAATGTCTAAATGAGGAAGTAAATCTTTTACATAGAAAGCT
TCATTACATATTAATTTTCAGCTTATAGGAGGTTTGCATACAACCACTTA
GTAGAATAAATTAGAGTGTTCTgtcttttctctttctttttccttttaat
tttttttaatcaaaataaaaaaaagggagGGGAGGGAGTTCTTTATGATT
CATCTTTTTAGCTAGCTAGCTAGCAAATTAAAGTTAAAACATGGGACGTT
TTTTTAGAGATGAGCAAACAAACTCAAATTGAAATCTATGAATCTATGAT
AGTACAGGTTTGATTTGATCACACTACAGTACTGTTCTCCTGACCTGACC
TGATTCTGATTTaaatgattttaatattttttaattaatccATATGTCTA
ATCTTTGGTTTTGGCTTTTGTGGTTTTGGAATAATATCCTACTGTCCTAG
TCAAATTTACAATACACCATATGAGTGTGTTTtatgaaaaacctttttta
atgGTAAAAATATTACATACTTGATTTGCGCATGTAcatgggtaacttgc
atcagtggagggaggAAACTTGCATACAGTCTGAGAAATCCTTCTAATTG
CACGCTTAACTTCCGCGGGCGTAAACTTGTAAATACGGGCTTATCATAGT
CCGCCCGAGTCCACCCATGTGCGATTGCACGTTTAATTTTCCGCCCTGCT
TGAAGAAGCTTGAGCAATATAGTGGggcttactttttttttaaacggaTG
GAACCATGGTCATGCGGAcaaaaacttatttttgaaTTGGAATCTTGGTA
AAATTTTGCATAAAATTGACCAAGcattccagatttttttccgagaAAAC
TCAAGGAAAATCGTCTATTTTGAACAAACAAacgaaaagtgttttcattt
cttttctaataACTTGTAAATGATGTACTGTATCTCAATGTAAGCAATGA
TAATAATACTGATTTAGATTATTTGGAACATGAAATTGATAggtaaaaac
acttttaaaaaccTTACAATTTGATAGCCGTGCAATTACGCGTTTAAATC
TCGGAATTTTAAGCGTGCAATTAGAAGGATTTCTCAGACtggcatagcca
tcaaatgactgaccaattaaagcagcaaaatttcaaacaaaagaaccaCG
AAgcttcgctcgcagctctactctaccatttttgttttgatttaactttg
tattttaatgacaagCCAGGTCATtgatttgagggctatgcatattagcc
tccactaatgcaagttagccgatctcacggtatatatgGTTAAGTCTCAG
CAGGAAACACCTAAGTCTGTTGTGACAAAAAGGTGtgcagtttttttatt
ttaggccAAAACACGGTCCAACTGGTTGGCATATGAAGAAAACTTTGGGT
ATTAAGCTTTCAATTGatgtaaaaatcattttctaagCACCACCAATCAA
AAGTACAAAttctctttttcctttttcttcatTACCGTAAgatggtctaa
tgtcaacatccctcttctaattactttagagataggaatgaCCCCTCTGA
TTGCtaaggaaaaaaacatttctatCAGTGGGTCTGACCTTCCTATATTC
CTACATTGAAGGAATAAATTTTGgcaagaatttaatttggcagatggccg
aaaaagtttttttcagagGAAATCTAATTTGGCCGTCAACttggaaaatt
aaatttggcattAGACTTTAGTTGATCacttctatttttttgttttgcca
gGTTCCTGCTACCACATTatatacaatttttattttgctaACAATACTGT
atcttcttttttccttttcaggtgaaactgttttaaaatgttaagctaaa
acaaatccaatacAATATGcttgaatttcaaattattttgccGACAGGCC
AGTCAATCAACATAATCCTAAAGTCTAAAGAATCAACTGggaaacatttg
aaagaaagtgTTTTTAAAAGTGTAAACATTCTGCTTGATGATAAAGAATA
TTTTGGGTTGAAATATTCTGATAGAAATGACGATACTCCGTCTTGGATAA
CTGATACtgataatttgaaatcaatgaGCTTTTTAAAAGCAGACTCAAAG
CACCCTTCCATGCAATTGTCTGTGCGCATGTATCCACCCAATCCTGATTT
TGCCATGTCAACACCAGAGTCAAGAAATCTTTTCAGATGCCATATGAAAA
ATCTGCTTGTATCTAACAATCTTGGGTGTGATTCAAGAACTCATGCAATG
TTGGATGGTTTTGTGGCCCAATATGAATTAGGGGATTATCATGAGGAAAC
TATGAAAGCAGAATACGGGAAAAAGATGAATAAGATCAATATTTATGCAC
CATCAATTCTCAGTGCTGGAACCCCGATTGGTGAAGCAGAATATATTCAA
TTAGTCCGTAGCTACCACAGAAAATTATCTGGAGTGAGACCAGCTCAGGC
AGATATTTTGTATCTTGGTATGGTACAGAAACTCCCACTATATGGCTACA
AAGTCTATAACATCTCagacaaaataaacaaaaactaccACATGGCAATC
TCAGCTCAAGGAattcatttcttttttgaatcAATTCTTGAAACATTTAC
CATTCCCAAACACAGAGAAGCATATCCTTGGGCCTGTCTGGTTTTTGCAG
AACAGGAAAGAAATAAAGTGAAATTGGGCTTTTTCAATGATAAGGGAGCA
TTTTCAGAGCGGTATGTCAAAGTTTCTGGAAAATTCAGCAATAGAAGTGG
AGCAAAACTGGTCCAAGATGTTGAGCTTCATAAAGCAAATTTCCTTGATA
AGATTGATGGAACCCAAAGTATTGTTTACGATAGCAGAAAGAAGGCTCAA
AGAGTCCATTCTACAAAAATCCCAAGAAGAAATTCAGCTTTCAATAGAAC
AGTGAACACTTTAGGTAGATCTATTAGGTCTTCTTTGAGAATCAACAAAA
AGAAACGAATTTCCAGTGAGGCTGACGCGGATTCGGGAACTGTTGATGAA
TTTGAACTTTCATCTAGCGAAGTACATGCTGATtaataaaaaaaaggttt
aaacTCTGCAATTCGTTGGAGAGAGTTTGATTCAGAATTGCGGTTTTAAT
CTTATAAGtttcttattttgtttttcgACAGTTTTTGCctgttttgatga
ttttaacatgcgtttgttcattttgtttgataaagaaaaaggggAAACAT
AATTCCgaacatattttttatataatgttGGTGGAgcaaatttttatgtt
ttcaatactttttctaaatccacatttaaaaaactgttctaatcaaagaa
aaaaaaacagcttgAATGTTTAGATTTCTTGCAGTGTGTATTTTTTCCAC
ATGTcgtctagcctggatatccagtctgtaaattatttcacagtctagtt
ttagatattttatgttctgatttacagcctggtctccctagagcgttttg
cattctcatatgagaatgcagtccgcNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNtgccctgggttggctaggaaacatgggttttcactttc
attctctagggagaccaagctctataatttaagaactttgtatgttgagg
taaattttattttttcttaaattttgagcttggatatccaggctacatgT
CGTCATGTTCCTAATATAATTCTGTGTTCATAATTTTTGTTCtctaattt
atgaaaattgacACGTTGCatatattttgaaaagtaatttgtaatattta
ttgaaagactaaactttgcaaattttag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014288TCONS_00014288Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014288-proteinTCONS_00014288-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000185supercontigsc0000185:220524..225001 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
27.07	26.81	14.2	13.27	26.51	20.22	19.83	19.33	12.04	13.04	7.18	6.25	3.29	2.5	3.29	3.61	6.29	6.4	1.94	2.33	6.04	5.41	19.29	19.32	23.63	20.06	7.29	6.7	21.57	19.42