XLOC_007989 (gene) - C. hemisphaerica

Overview
NameXLOC_007989
Unique NameXLOC_007989
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000185:178806..182676+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007989 ID=XLOC_007989|Name=XLOC_007989|organism=Clytia hemisphaerica|type=gene|length=3871bp|location=Sequence derived from alignment at sc0000185:178806..182676+ (Clytia hemisphaerica)
tcgaattacaaaatgattcgaatgtttttgttcgatttcgattttgaaca
aaaaataaaatcaaaaaaccattttcagtTTCTGTTTTATTGGAAGGAGA
GAGTtattcatcaaattttgaaattatggcATCAATCACTGAAGAAAAAC
TGTCTCCAGATGTTGACAGAACTTTTACGAAAGAAAACCATTCAATGTCT
CCTGAATCGGTAAAGgacaatattgaaatcaaaaGTGATGCTGTTTTAGA
TGAAATTGCTGCCAAAGTTGATGCTTtggattttaacaaaaaaagcgACG
GagaagatgatgatgattttatAACCGAAACCGAGACTGAAGTTCAAACC
ATTAATAGACAATCAGAAATCATTAAGAAACAAGCTGAAACTATCAATAC
ATTGATTCAGCAATTGCGTGTCATGTTTGATGAATATAATGCTGCTTGCC
AAGAGAAAGAATATTATGAAGATTTGAGTGAAGCTTTATTTCGTTACATC
GAGATTTGTGAAGGTAATATCGGTATTCAAGAAGAAGTTTGTACTCAAAG
TGGAGAggatgaaaatatttcaaatctaaTCACCAAAGATCAAGATGAAA
CGACCACCGAAAGTGGTGATGGTGCTACGGATCCAAAACCGACCCCAGAT
CGAGTCGAAAAACAAGCCGAACCCACTACAACAGACCAAGACCAACCAAC
TGAATCTATGGCGGTTGATGATTCAGAAACAACCGCCCCACCACCACCTC
CACCCAAACAACGTATTTCTAACAAcgagttaatccgattaaatcACATC
CTATTGAAAGAATTGATCGAGTTACGGAATGAGCGTGATATGTTAcgaga
aaatgttttcttttctggAGATGATGCCAGCGAATCTTCAGATGCGTTAA
CTGAAGAAGAAGATCATGCTTGTGAACATTGTTCTGAAACTGATCTATCT
GCTTCTTCAATGTCAAAGAAAATAGATAATGGTGATGATGATTACGAACA
TaatgatgataatgatgatatgaagaaaatcgaaaatgaaTCTGAAGAAG
ACACTGAGTAAAGACAATctttatttttgtcttcttgAATTAGAGTCTTG
TTTCCACACTGGATGGAGATCTTAGACATCATCTCTACAGGGTTAACTAG
GGGTTAGAATGGGGTTATACTTTCAGGCTTACGTATAGGTTATTTCAAGA
AAACTGAAGGGAATCGTGTCAAATTATCTCTTAACAATGTTTATCCNCCA
GATGTTGACAGAACTTTTACGAAAGAAAACCATTCAATGTCTCCTGAATC
GGTAAAGgacaatattgaaatcaaaaGTGATGCTGTTTTGGATGAAATTG
CTGCCAAAGTTGATGCTttagattttaacaaaaaaagcgACGGagaagat
gatgatgattttattACCGAAACCGAGACTGAAGTTCAAACGATTAATAG
ACAATCAGAAATCATTAAGAAACAAGCTGAAACTATCAATACATTGATTC
AACAATTGCGTGTCATGTTTGATGAATATAATGCTGCTTGCCAAGAGAAA
GAATATTATGAAGATTTGAGTGAAGCTTTATTTCGTTACATCGAGATTTG
TGAAGGTAATATCGTTATTCAAGAAGAAGTTTGTACTCAAAGTGGAGatg
atgaaaatatttcaaatctaaTCACCAAAGATCAAGATGAAACGACCACC
GAAAGTGGTGATGGTGCTACGGCTCCAAAACCGACCCCAGATCGAGTCGA
AAAACAAGCCGAACCCACTACAACAGACCAAGACCAACCAACTGAATCTA
TGGCGGTTGATGATTCTGAAACAACCgccccaccaccaccaccacccaAA
CAACGTATTTCTAACAAcgagttaatccgattaaatcACATCCTATTGAA
AGAATTGATCGAGTTACGAAATGAGCGTGATATGTTAcgagaaaatgttt
tcttttctggAGATGATGCCAGCGAATCTTCAGATGCGTTAACTGAAGAA
GAAGATCATGCTTGTGAACATTGTTCTGAAACTGATCTATCTGCTTCTTC
AATGTCAAAGAAAATAGATAATGGTGATGATGATTACGAACATaatgatg
ataatgatgatatgaagaaaatcgaaaatgaaTCTGAAGAAGACACTGAG
TAAAGACAATctttatttttgtcttcttgAATTAGAGTCTTGTTTCCACA
CTGGATGGAGATCTTAGACATCATCTCTACAGGGTTAACTAGGGGTTAGA
ATGGGGTTATACTTTCAGGCTTACGTATAGGTTATTTCAAGAAAACTGAA
GGGAATCGTGTCAAATTATcttttaacaatgtttatcCAGAGCTGTTTAT
AGTCAGCAAAATATGTTGCTATCAGTTAAAAACTGCTCTTTAGAAAGCCC
ATATCAACAAGCCTACGGGGTTATATCCTTATGGGATTGTCCAAATTTTA
GCATatttatgtttaaaaaattcatttaaaaatgtaaatagaATAATTTC
GTATGAGTTCGTACATtccaaattaaattatttttgaaaattttgatatc
ttgTAAAGtagttaaaattttgattattctggaaatcttgaaatattttt
tgctgaatgCAACTATTGAATTGAAATTTCGTTTTGGTCCGgtattttca
aacatttcttAAAAACGCAATAACGATAAATTAACTCGATTTTGTATTTA
ACAGTTTTTGCACTCCTATCTCAAGTGGTTCAAGTTAGTTGGGGGGAGTG
TTTAATATAACAACCAgggcttgaaaatgaaggaTGGATGTCAGATTCCA
TTTTTCTATTCGCCCATTTGACCCCTGCCTTAGTTATACCTtgaggaaac
tttttttttctttgataaaNCGAGTTACGAAATGAGCGTGATATGTTAcg
agaaaatgttttcttttctggAGATGATGCCAGCGAATCTTCAGATGCGT
TAACTGAAGAAGAAGATCATGCTTGTGAACATTGTTCTGAAACTGATCTA
TCTGCTTCTTCAATGTCAAAGAAAATAGATAATGGTGATGATGATTACGA
ACATAATGACGATAATGATGATATGaagaaaatcgaaaatgaaTCTGAAG
AAGACACTGAGTAAAGACAATctttatttttgtcttcttgAATTAGAGTC
TTGTTTCCACACTGGATGGAGATCTTAGACATCATCTCTACAGGGTTAAC
TAGGGGTTAGAATGGGGTTATACTTTCAGGCTTACGTATAGGTTATTTCA
AGAAAACTGAAGGGAATCGTGTCAAATTATCTCTTAACAATGTTTATCCA
GAGCTGTTTATAGTCAGCAAAATATGTTGCTATCAGTTAAAAACTGCTCT
TTAGAAAGCCCATATCAACAAGCCTACGGGGTTATATCCTTATGGGATTG
TCCAAATTTTAGCATatttatgtttaaaaaattcatcTGAAAATGTAAAT
AGAATAATTTCGTATGAGTTCGTACATtccaaattaaattatttttgaaa
attttgatatcttgTAAAGtagttaaaattttgattattctggaaatctt
gaaatattttttgctgaatgCAACTATTGAATTGAAATTTCGTTTTGGTC
CGgtattttcaaacatttcttAAAAACGCAATAACGATAAATTAACTCGA
TTTTGTATTTAACAGTTTTTGCACTCCTATCTCAAGTGGTTCAAGTTAGT
TGGGGGGAGTGTTTAATATAACAACCAgggcttgaaaatgaaggaTGGAT
GTCAGATTCCATTTTTCTATTCGCCCATTTGACCCCTGCCTTAGTTATAC
CTTGAGGAAACTTTTTTTTTCTTTGATAAATTTAAATAGTTCAGGATTCA
GGATATTCCCACGATTTCTCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014282TCONS_00014282Clytia hemisphaericatranscript
TCONS_00014283TCONS_00014283Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014283-proteinTCONS_00014283-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000185supercontigsc0000185:178806..182676 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09	0.03	0.08	0.02	0.6	0.28	0.49	0.53	0.32	0.41	0.34	0.83	0.17	0.16	0.24	0.32	0.09	0.2	0.28	0.43	0.22	0.43	0.18	0.31	221.22	191.56	1.51	0.96	5.89	4.48