XLOC_007851 (gene) - C. hemisphaerica

Overview
NameXLOC_007851
Unique NameXLOC_007851
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000180:49281..55294+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007851 ID=XLOC_007851|Name=XLOC_007851|organism=Clytia hemisphaerica|type=gene|length=6014bp|location=Sequence derived from alignment at sc0000180:49281..55294+ (Clytia hemisphaerica)
gttttttgtttttgtttttagtaaAAATGATACATCTAAAAActtaaatt gaaaatacaaaagaatagtAAAGTGCTGATAATTATGGCATTTCACCATG CTGATGTTAAGCCGACAGCAACCTATNaaattgaaaatacaaaagaatag tAAAGTGCTGATAATTATGGCATTTCACCATGCTGATGTTAAGCCGACAG CAACCTATATTGGAATCAGTGACACCTCCAAATATGATGATAATGCTAAG ggtataaaaaagaaatctctaaATCGGGTATGTAATCAATTTATTTAGGT CAATTGTCTATACTTACCATACAAGAGTAAttacaaagttttattttacc GTATGGATACAAATATTATTCAGACATACTTGATTCTTGAACCTTTTTTT GTGCAATTCTCTAAACTCTCATCGTTTTTTTTTacataacttttatttat taatttaaaaAAGCTATTTTCTTGAGATATTTGCCAATTAcatcaacttt tatttttttcaggtatGGAGGCAATTATCACGTGTTCAAAAAATGACAGT TGTTATGGCTATTGCAACTGTGGTTTtgtttttctatgttttcttttACA AAACATCTGTTTCTCAAGTAACAGCTGAAAGACTATCAAAAAGTGATCAA CCTCTTGCACCCATCAAAAACCCAAGGAAAAGTAAATTTGACCGTGAAAA ATATCtagaaaaaatacataaagaACTAGATTCTAAAATACGACCCATCA AACGTGGTCCACCTAAAAAAGACAGTCCTTCAAATATAAAGAAACATTTT GAAGAGttggagaaaattaagaaagaaaaagtagaGAAGAAATCGGATGA CGGCTTTAAGGAGTACAATATAATTGATGGTGAACGTGAtgatgtcaaaa aagaaaagatccgtcttcaaaaaattaataacgCTGACCCTTCCACAGAC TTTGCTCATAACCCGCACAAAGTTCCTCAAACAGAACGCCAGTTGGAAGT CATTAAAGCAATGAAGCATGCATGGAAAGGGTATAAAGATCATGCTTGGG GTCATGATGAGCTGAGACCTATTGCTAAAACCTATTCTGAATGGTTTATG TTGGGTTTAACCATCGTCGATTCTTTGGACACTCTCTGGTTAATGAATAT GAAGGAAGAGTACAAAGAGGCTAGAGATTGGGTTGAAAATGACTTGATAT TCGATAAACATGTTACTGTTAACTTATTTGAAACCACTATCCGTGTTCTT GGTGGGTTGTTGAGTATCTATCATTTGAGTGCTGACCCAATGTACTTGAA CAAAGCTGTAAGAAACAATAgatttaattatttcttttcttattcAATTT TGTCTTTGTTAAACACTTTTATCAGGGTGTAATTTGATATTTCATTATCT AAAGTTTTTGCCAACAAACTgcaacaaaagttaaaaaatggaagtTTCAT TTCATTTGGTTCACTTAGCTTGGAGAATGGAATTTTTGTTTGgaaagaaa ttaaattctgtTTATAATCTAGTATTCTAGTTCCAAAACGGTCATTATCC TGGATACTAACAAATTctcaaaattctaaaataacTTGACATCGCCACAT TTAAAACAATCATCGATATCAACTTTCTCAAccctaaaattaaatttttg tttcatttcagaGTGATCTTGGCGAACGTTTGATGGGAGCATTCAAATCA TCTTCATCAATTCCGTACTCTGATGTCAATCTCAAAGACAAAGCTGGAAG ACCACCAGCTTGGGGTCCTGATAGTTCACTTGCCGAAGTTGCAACCATTC AATTGGAATTCAATGATCTATCTATGAGTTTGACAAACCCAAGATATCAG GTTTGTATAATTGGGCAGGATTGAGTTAATCTTAATAGTTATTAAGATTT TGTATAACTTTAAATCCTACAACAATTTTTGGTGTTGATATCTATTCTAT TCTAAAGTGATTTTTGCTACTGCTGAACTTATTCATAAGCGTAACCAAAG TAAAGCAATGGTTTTCCTTGATTTACaatagcaaaaaaacaaaagaaacc tagCTAGCTAGTTTCTAATAACACATGTTACAGGTAATAATAGGAGTTAT GTTATTTGATAACTGCTACATGGTTGATTAGTATGATAACGTTGTGTTTC CTATCATACCCTAATCACTCTTGATTTTCAAACCTCTAAATAACTTGATC ACACTTTTGATTTTGTATAGTCAGCAGGTCACAACATCATGCttcagatt ttttctcaatcgcGAACCAGTGGTTTAGCTCCCATTTACATCAATGCAGA TTCCGGATCTTTTCGAGCGAGCTCACATATAACACTTGGTGCACGTGGTG ATAGTTATTACGAATATTTATTGAAACAATGGTTACAGGGAGGTAAAGAA GACGACCAGTGAGTGATGTTCTGTTTTTGATTGGATTTTCTTCTCAATTA TTTATTAAGTAGTCAGAGCGATTTGGAACAGGGCCTGAGCCTTTTTTCGA ACTAAGATGTGACAAAGATAAAGCGCTTGTTAAGAGGTGCAACTCATTTG TGCTgctggaagaaaatttcgattttgccCCCCTCTGATATAAAGAAAAT CGCTCTATTTTCATAGAACTTTCCTGGAATCCTAGCCTTCCTGAAAGATT ATtctataaattaccaattttaCGATTTACTTTACACTTTTCAGAATGAA AGAGGAATATTTAAAAGCGATGGATGGGGTTATGAAACTTCTGGTCAAGA AATCCAAACCTAAAGGATTGACTTATGTTGGAGAGTTACTTAATGGGCGG ACGTTCAGTCCTAAAATGGTAACTATAATGAAGTAGTTTTCTTGAAAACC AAATAATCTTTGTTCTGTTTACCTGTCCAGTGCTCAACNCGGACGTTCAG TCCTAAAATGGTAACTATAATGAAGTAGTTTTCTTGAAAACCAAATAATC TTTGTTCTGTTTACCTGTCCAGTgctcaacatttttttaaaagtcagaaa gATTTCTATTGTTATGTGAAACTGAACTTTCTTAAAAGTTCGTAGTGGAT CTCTAGACAAGATAGAAGCTTCAATATACCAGCCACTGCCCCTCAACCAT AAAAACAGCATAGTGACATTTGATAATAATGGAGAGAGGTACTTGAAGCT TGGCCTCTAAGTTTAAGTAATAACTTCCTTTTAGGATCATTTGGTGTGCT TCCTACCAGGAACATTAGCCCTTGGTTATAAAAATGGTCTACCAGAGTCT CACATGACATTAGCGAAAGAACTGATTGAAACATGTGTACAAATGTACAA ACAGATGGGTACTGGATTGAGCCCTGAAATTGCCTACTTCAATGAAAGAA ACTCTGGTCATAAGGATATCATCGTCAAGGTTTGTTTCCCTGAACTCTTA AAAAAAGACTAGGATCTTTATAGTCTTGGtggcttttttttatttttatt tttatccaaATCATACCCCTCTCTTCGAAGCAGTGGTCTCTCTGCAGTAA AACTACCTACATCAACACTGGCGTTTTCAAAGAATCCCTACTATCAttgt tttatttcttctttAGCCTTTGGATGCTCACAATTTGCTTCGTCCAGAAA CGGTGGAATCGTTGCACGTGATGTATGAAATCACAGGTAAGGAATCACAC TCCTTTACCCCCCCNATGCTCACAATTTGCTTCGTCCAGAAACGGTGGAA TCGTTGCACGTGATGTATGAAATCACAGGTAAGGAATCACACTCCTTTAC CCCCCCCTGGGTTCTTTAGATCAATTGGCAAGTTTAAACTTACCTCCAAC CCTTCTAAAACAATCGCGGGGTTGcacaaaaagttcttgatttAGGTTTG CTGGCCCTTACATCTTAAAATCTGTGTATAGATTTTGTTGTATATAAAAC ATTATTTTACTTTTGCAACACGTTCTGATTATACTGAGTTAAATATCGAC TCCATTATCCATACATTTATCTAAAGGTGACAAGAAGTATCAAGAATACG GATGGGACATCCTCCATGCATTCAATAAACACTGCAAAACCCCTGGTGGT GGCTATGTTAGTATCAATGATGTTCGTAATGCCGCCAACCCAAGGCGGGG TGAAGGGCGGGATAAGATGGAAAGCTTTTTCTTAGGAGAAACTCTAAAGT ATTTGTATTTATTATTTAGTGACGTGCCTATTGTTCCACTagataaattt gtttttaatactGAAGCCCATCCATTACCTATACACGCTAGGTAATTCTT AatatatttaagattttttagagaattttttcgAACTTCgttctcaattt ttcatgagAGAATTTATTGTTATTTATTGATATGTATTTTTGTAGAGTGG ATATTTTTAGTTGACATTTTATTGTTGTCAATTCtgcaatttttttgtta aattttatcgaaattCTCTAACATTTTTcacagggtgtctacgggactTT GAacaccttgaaaaccttgagaaccttgaaaatgaaccgatgaacattga aaccttgaaaactgtccatttttggggaaaaaagcttgaaaactcaggga aaccttgaaaaatagtttaaaaCCTCGAAAAGCAATTAATGCTATTCTTC TTATTTATCATTTACTCTTTTCTGAATAGGGCAGTGGCTAGAATCTAGGT TTTTCTCTGGAATGGAAAAGTACACgtcaatttttaaatctttttgccTT TGAATATTAATTTGTCACGATGTCTACTAGTAGTATCTTACGAAACTAAT CTTAAAGTCAGTCGTGCCAACTTAGtttaaaaaaaccttgaaaagtacCA ACATTTCTGCCCAAAAATCTTGGAAAAGTACTCAAAATAGCGCAACATag ccttgaaaaccttgaaaatgctgAAAGaaaatccgtagacaccctgtttT CACCAGCAAGTCTTGTTATTGAAAGTGTTGAAAGGTAATGTTATTATTTC AGACNCCAACATagccttgaaaaccttgaaaatgctgAAAGaaaatccgt agacaccctgtttTCACCAGCAAGTCTTGTTGTTGAAAGTGTTGAAAGGT AATGTTATTATTTCAGACAGGCTTCGGATCAAGGAACCAACAAATGAAgt aaattgaaattgttttagTAAGAAAATGTCTTTACTAGCCCGGGGTCCAC TTAAAGCTTTTTTGATAGACTGAATAGCGCTGATGAGGGGCCCGGTGTAA TTTGGTAGACTCCAATTTTTGGCTTTGCTTGAGATGATAGCAAATACATG CAACTAGATCCAGTCCCTTTTTGGAGAAAAAAACAAACAGAAAACAATGA CCAATATACCAATTTTTTCAAATGTTCGAGGTATTTACATGTTTTTATTA TAGTTTCAAAAATTTTGATAGGGTTTTAGAATATATTTTATTGATTTGTT GTTTTCTTATAATTCTTGAAAATGAAAGTGAAAAAGTTCAAGATGGCGAT ATCCTCTAGTCTACTtcactggactcagcgccatcaaaatcatcagaaag cagGTTCAGTCAGAAGTTGACTCTAGTCTATACCTTTACAAGATAAGTTT ATTAAAGGTACATTTACACACagaaaatgaatgaaataatTTCCATTGAT GCTCAAACATTATGTTAGATTTGTGATgaatttttgtttatgttgtaTTT TTGACAAACAAGTAATGTCCATCGCTTCTTGCCATTTGACCTGTTGCGTT ATGATATATTCAAGAGATAATTTTTATACATGTACACTCACATTATGATA ATTGATTCGACAAGAAgtattatttttattcaattttcaagttaGGTTTT AATTTTCCGTATTTATTGTAAGATTCAGGAAGTAGCtgataaaaatattc ttactgcTCTTTGCTCTTCACTTCATATCAATTTCTTTAATACCACTCat ttttgttatcatttttcaattttattataACCAGCTTATAATTGCACTAA AAATCTAGTTACTTTATCAACCTTGACGGTAAAGTAACATTTTATTTAAA TACACTCACTAGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014034TCONS_00014034Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014034-proteinTCONS_00014034-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000180supercontigsc0000180:49281..55294 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
MAN1B1endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.57 4.35 2.13 2.41 32.97 25.17 26.43 28.74 15.98 20.06 13.33 10.39 9.75 7.69 8.93 9.13 14.07 12.33 5.86 9.49 9.79 10.93 9.36 11.11 14.21 15.36 10.39 6.93 12.3 10.01