XLOC_007644 (gene) - C. hemisphaerica

Overview
NameXLOC_007644
Unique NameXLOC_007644
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000171:347329..356511+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007644 ID=XLOC_007644|Name=XLOC_007644|organism=Clytia hemisphaerica|type=gene|length=9183bp|location=Sequence derived from alignment at sc0000171:347329..356511+ (Clytia hemisphaerica)
TTTAAAGCCTTAGTGCGCATGcgttcaaaataaaaacatttctatGGTCG CACGcaaaattcgagaaaatataGAAATTTTTCACATAAAGATCGACCGT AAATTGGCCAGTGAAAGGCTCTTTCTAAAATTCTATTTAGGAACATGGCT GCCTAAGAGGTCAGAAAAAAAGGCGAATGAAGAtctgatttttacttttt caaaataatggGTAATTAGTGCAATTTGTTTTTAGTTAATTATGTAATCT GATTTTACAACACACtggttatttggacgttatttCTACCCCATGAAAAG GCTCTGAGTGGCCTCTCCAAGTCCGAAANgagatgctttgttgtcttttt aatttttgtgtaaacttgcatatgttttgcatactttccaactaaatcca accacggctttttcgttcctctatttttgcatacaattcaagatgNctga aaaaaataattataaatatCAAATTGACAACAATAACTGACAACACACAC ACCCAGCACAATGTATTATTCAGTGCAGATTGGAGATACAATCTTCACTG TTCTGAATCGATACCAAAATCTTCATCCCATTGGTTCTGGTGCTCAAGGA ATGGTCTGGTAAGAtatgattttttgtttattttttgacaGCTCAATCCA ATCACAACAGTATAAAACCCACACATCCCTTTGAAAAGAATGACAAATAT CAATtctgtttaaaaaatgacattaaATCATTGAGATTTGGTGCAAAGTG TGCTGCTTCTCGCGTTACaacataatagacctttttgccgCCTTTCAGAG ATATATGTCGCCTTTCcatccatccgccatattgaattgtatgcaaaaat tatggtggccgaattgccgtggtgaaattcccttggaaagtatgcaaaac atatgcaaaaagaaagtattaatataaaacttataTACATGCatcataat tggcattatattaaagtgtgatcttgtagaagaaagattaaatttgcttc tcttgaaaactaaaaataattatattcgctcatctcNAAAAGATATGTTT AAATCCTGGATATGCAACTGGCAACCAAGAAAATCCCAGGTGTCCGAGGG CATCATCAGGGTTGTATTGAAATGGTCAGGATAAAAGAGGTTTTTGGGTT GGTTGGCAAActatatcatccaccaggatgcatcctctNGAGCTGAAAAA TCATCAGCAAAGGTagaaaataatccttattcggctgacggtaaattatt ctcctgggaatagagccgccaaatgatcaaatcaaaacattgataatgtg taacgtcataattactgcttttcagtttgcgtgttttgaaagtttgatgt gtgtactccgtcttcgtggaatttcttaatggcatgaaaacagaatatgc tatgNgactgttttctaagtatttttctgaaatttgcccgtatCGGTGAA ATGggtctccgaccccggctcgaaccaccaaatgcaagcaaccttggttt tcaaacccaatgcctaaccgcttgCGTCAACAAGACACGGCAGAAAGCTG TCATTTACAAATACTTATactatagcgtgtaatttacagacctttattaa gctcccaaccctactggtgcccctacaaggatccctacgggatcctaagt taggtctcagggtacgaatgcccctaagaaggccttctgccttatattgt gactctcgagctccaaccctaaccctaactgataagaaCCGAACCTGACC AAACCCCTGTCTTGGTCcacagattgaaaaatttcacttgcatcctggtg gatgatatcgtctgccaaccttTTGGGTTAAGAGTGATTTATTTTCACTC TAAATTTTTAGCTTTGAAAACAAAGCTAGCAGGGAAAATTATATAGGTTA TTCAAACTGATTGAACAGCAGTGGTACTGTAGTGGTCTGAAGGGGCTCTT CCAGAGATGGGTCTCCAATTGACAATCTTGATATTGAAAAAGTCACAGAC AACTGCCCCGCCCATGTTTAGGGCTTGTATGGGCCAAGTTTTTAGAGGCG AAAAACCAAAGTTTTGTGGCCTGAACATTAAATGTTTGAGCTAAATAATG ATTTGCTATTTTGGCCCAAACATGACCTGAAAAAGTTCAAAGTATGTTCT ATCCATACCGTGCGTGGATATTTATTCTGCCACAGCAAACATCATTCCAC ATTTGACGTTAGGGATTTTGCCACTTGACATTCAAACCAAAAACACCCGA GAGATTTGACTGAAATGAATATCAAAAAAGAATTCTTTAGAAATACCAAC AGTCTGGTACATCCTTAGAAATTGCACAAGGTTTTCCTTACCCTGTATAA ATGCAATATGATGTCTCAAGCATAACATGCTAATAAGTCTGGAAATTACG CAAAGCTTATGCCAAATCATAAACTGCATTCAGATGGCAATACAAAAGAC AGTGTTCCAACTCATACTGAATATATTCTGCATATACTGTAGTGTGCACC ATTTCCAGACTGGCATGCTAATGTGacctttaaatcaaaattggcaaaaa aggAATCGAAAAAACAGCTCCAACGTAAAAGTAGTGTAATCGTATTAAAG GAAAATAATCTTGAAATGTGCAAGCAAAAAATGACCCATATAATTAGATA TATCCAATTTTCTGCAAATACAAGAAGAACCCCATGCAATTGAAAGGATG TTCCTAACTGTCCAATGGGAAGAAAGGGCAATCACAGTACGTTGAataag aaattaaaataaaaaattcaatccATCATACTCTACTTTTTCCATTCTAA AATTTGGACAGTTATGTAGCAGTTTAATAAGGGcgggcattttcaaaaag ttagcTTAAAAAGGGCAGATAAGGTAACTGCTTCGTTGTAACTAAAATTT TCTATTATTTAGTGCTGCTTATGATAGTGTCACCAAAGAGAAGGTTGCAA TCAAAAAGTTGTCAAGACCATTCCAAAATGTAACACATGCAAAGAGAGCC TTCAGAGAACTAAAACTAATGAAGATCACAAATCacaaaaatgtaagaaa atttttaacagAACAGTGCTTTTAATAGTTCTTTTGTTGCAAATAAATTT GTGATAAAACTGTGCTTTTTCCTGAATTGGCGATATTATGACCAAATTTG CCTTAAAAGGGTACATTTGTGTACTTTGAAGAAACAATTTTTATGGTAAT ATAAGAGATCACTTGTTTAATAAGTTTTTATTCCTTTTCAGATAATAGGA CTTTTAAATGTATTCACTCCAGATAAATCACTAGAAGAATTTCAAGATTT GTAAGTTATTAAATGTATTTTGTTTAATAATTAAGTCAAACTGTAGTAGA TTTTTATGCTTCTTTTTCATCTGTTTTATAACACACTTTCTGAAATAAAT TTTATCTACCTTAATCCTTATTGATAATTCTTCGACAATGTTTACTTAAT TGAATGTCTTTATCCCTCTAATTTtaggtatttttcatttttgcgcTTCt ataatttgtgttttttgatgaaaagtatAGGTTAAGAGGGCATATAGAGG ATTTATTTCTTATGGACAGCTCAAAGATGAGAATTCTAcacatttttaat aatttctaaCTTGTGCTTCTTTTAATATTTGTGCATCTTTCTGCGCAAAA AATGAAAGGTACACAAAAATTAATGAGATTAAGGTACTTCAATATCTTCT AAAGTGCTACTTTGcctaaaaaatagcaaaataacaAAACGTATTAGGGA CAATCCTCAAGACTTTTgtacaatttttcaaagtctaTGCCACTTCACTT TTTAAGATATCTGGTCATGGAACTCATGGACGCAAGTTTATGTCAAGTTG TTCAAATGGATCTAGATCATGAACGTTTATCATATTTATTATATCAGATG TTATGTGGTATAAAGGTAAAGCCTTAATAAAACAATATTGGTGTCAACTT AACTGAAACAGTAGCCTAGCTTATTTCATAAAACTTGTCCGAAATGACTT TAGTATAGCTTGAGACCAGAGTGTTATGGGATGACAACAATAtgaagaaa attcttcagattttaaatttacctttttctttttcttagcATTTGCATTC TGCTGGCATCATTCACAGGGTAATTCAAGAAAATgataactttaattttg aacATATATGAGTCATTACAAGCAATTTGAAATACAAGTGAAATGGAACA GTCGTGAGATGttctaaaaaaatgttcaattcaggcaaattttgaatttt tagtaTTTGCTTGAAATTCCTTTCTTGGCGTATACAAATAtcctcaattt tttttcaggatttgAAACCAAGTAATATTGTTGTAAAATCAGATTGTAGT TTAAAAGTAAGTACAGCTtcctttttcaaatatttaagGTGTTACCCAAT ATTCCATGCTATGTACTTTGACTTTTGGAACTAGTGTCAAATATTCTTTA GCCtaattaaaacaaaagaaaataaatgaaaagtgaaattCTCTTTGAAT GATTTCCTTTGACTGAACTTTTCTCCTGTATTCTTCTCTTAGATTTTGGA CTTTGGATTAGCAAGGACTGCAGGCTCAGCCTTTACTATGACACCTTATG TTGTGACGAGATATTATCGTGCACCTGAAATCATCTTGGGTATGGGATAT TCCGAGAACGTAGATGTATGGTCCATAGGTTGTATATTTGGAGAAATGAT CCGTGGTTCTGTCATGTTTCCTGGNAGAGAACGTAGATGTATGGTCTATA GGTTGTATATTTGGAGAAATGATCCGTGGTTCTGTCATGTTTCCTGGTAC CGACCATATTGATCAATGGAACAAAGTTACAGAATTATTATCGACACCTC CACAAGCTTTTTTTGACCGGTTACAACCCTCTGTAAGCTTATCCTGTATT TGAATTTAtatctgttttcttttttttgaattcatGCATTAAAGTTATAA TATAAGAAACAACAATTTTTCTGTGACATTCTATAATTTTGATTGAACCA TAGTAAAAAAGTTGACGAAATCttgaatgtcttcattttgaaaaatgttt cccaCATCAACCTTGCATCAATATTCATCtttttttcaaaggaattttct ctgtacaaaaaaaaagttaatctTCCTACTTACATTATGATTTCGTTTTG TAATCTTACCAGGTTCGAATGTACTGTGCAAATCGTCCAAGGCAGAAAGG TTATAATACAGAAGAACTTTTCCCTGAAGAGCTCTTCCCCTCTGGAAACA GACAAAAAGGTACAACTTTTCCTTTAGCCTATGTTAATATAATTGTATGC TATCAAGATAATGAgttgttgaacggtgaaaaagaattttgatttttccc gacatgtttcggactcggtccgttctcaagggaatcAAGATAATGAGata caaaaaatttcatttccaaacaACTATGCTTGAAAGTCAGTGAGTGTCCC TCAAGGCAACATTCCCAATTTTAAAGATCTATAGAGTTGGTGAAAAttaa taattgaaaaatttagttggtttatttctatttttctgttattttctgCA GGGAATTCAGAGGGAATTGCATATTTGGTTACGATTTAGATAAACGCCAT CATAGATAAACTCATGAGATCATAGTTTGATTTCTTACTAATGAAATATA TTTGAATTTTAGTAATACAAGCACGAGATTTACTGACGAAGATNATCATA GATAAACTCATGATATCATAGTTTGATTTCTTACTAATGAAATATATTTG AATTTTAGTAATACAAGCACGAGATTTACTGACGAAGATGTTAGTGATTG ACCCGTTAAAACGTATCACGATAACACAGGCGTTGAGCCATCCTTATGTC CATGTCTGGTATGATAAAGATGAAGTTGAAGCtgtaagatttcttttttt tttctaaaggacTTCAGTCTCCGAATGGTTCTGGAATGATTTTTTGTCTC GAATTTCtgtgcaaatcaaaaaaatcttggACAGACTTGGCATATTTTTT GTACAAGCTCGATTTTTagtctaaaataaaaaatccaacctAATCACTTT TATTGTATTGTTTCAGCCTGCACCAGCACAATACGATCAAACCATTGATG AATCGGACCATACTGTAGAAGAATGGAAAGGTACCAACCATTTATGACTC CTAAAAAAGATTTCGCCTTTTTGCTTGAACAAACACAAAAATTATGTTAT AATCTCTGATGTAGcacctaaagtctgtctcaaaataatttgcagctgag acaaagaTGGCTGTtgtaactcttgatagaatttAGACTTTAGAAACCTC TAATTGGACAGTAAGACCACGTCACTGTGTTCAAAGGCTACACATCTCAG TCTCAAGAATCGGCATAATTTGAAGGCTTTGTTTGGAAAATTTGCTTTTT CCAATCTATTTTTTGTCTGAtactttaaaataaattaattatttttccaa taCTCAACGTTTCGTTATTCAAGCATTCATCAATTACAAACAACACTCTT AATATCTagcttcaaattagtttttgttttgtcCGAAATGAAGATTCTAC TTTTAACATTAATTCTTATTTGATTGCAGGAATGATTTACGATGAAGTTT TATCATATCAACTCGATCAGCAGATGAAGGAAAAAGCTAATGCCAAATAA GCTGTATAAGGTAATACTTCtgcagctggcacacaacgttttttcgacgt ttatctaacgttcacaacgtccatataacgttagaagaacgttgaaacaa cgttgtgtgccagctgggtctgCTTCTGAAGATTTCCCAAGCATGATGGT CATCGACTTTGCCTCATTGAAAAAGTGTCATGACTAGATCGTATCAATCA TCTATCctattcgatcttcaaggaagAATTTCCTAGTTGAGGCGGGATAG TTCCAATCATGGAGAGATTGGAATATTGAGGTTGAGAATAAATAGAGAAT CTTTGTATATGTATATCCCGGAGGGGGGATTttaaaaacgaccgtacgtt cggccaaaaatcaggtctctaaaatcggaccgttacagtgcaggaaagat ttcttgaaatttctcaaattttatctaaatcctttggtattttctcaaat tttactacgcccttacagtgcactttttcccacttgctcacaaatcaacc cttacagtgcactttccaaagtccaaaaaacctacccttaagggccacaC GTCCGGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC ACGTCCGGTAGGTtacttacctggagtgcccccccccccgggatgtatat attgaaaattaaatatattttggCGTTTTTTGCTTTAGATTTTGGTAACA ATTGTTAATCAATATATGTGATCAATATTTCTCCTTTCTTTCTTAGGTGA AGTTGAGCCGCTTGGTTATGCAATATGAAAAGGATAACTTGGCGTAGCCT TATCTCACACATTTTCAACCTCCTGTCAATTAGAGACTAAACCGACAACA CTGCAAATGAACATTTCGTTTtgttaaaaaaagacattctaTGCTTCACG TGAGTTTAACTAAAACGTTATTTGTGAGCGGAATTGAATAAATGACTCTC AACAGAGCTTTAAATGAATGGATTGATGCATTGCGTTGAAAATACAAAAG ACAGTTTTAGGGAATATATGTCGCAGCACATTTTCTTTCCAGAAACAAAA ATCAAANACAGTTTTAGGGAATATATGTCGCTGCACATTTTCTTTCcaga aacaaaaatcaaaatacaaaaattttttaaacaattaatCTGCCTactaa aaattttacatgggTTGGCATATCTTAGTCAAAGTACGGTTTGTGCTTAA CATAAAGTAgcatttttatattatattttattaaatagtccaataaggct ctgAGCCTGCTCGTGGAAACAATTCAAGTGTTATGTTGGAAAAGCAGTGA GCACTTGGATATGTAACCCTTTCTTCATCCCGTTAATTTCATTCCTTTTA AACGAAGTCAAAAAATTataacctttttctttcaaCTCCTTGTTATGAGT TTTTTATTTAATCTATTGTCACGCTCAACTATTaattattttacaaattt tattaCATTCAAACATTACACATACACCTACTTTAATCATTTTAGCAGAT TGAAAATAACATTATTTTATTTGCTGTAGCGTAGGGTTTTTTTATTCGTG ATACTGGATGATGTACGAAAACACGTCCGGAAAGCCGGTTCTTTGCCACT GATTCTGAATTACGAACAACAAACCATACTTACGGCTATTTTTCTAAAAG TTCGCTGaaaattcaaatcatttttcTGATCTTTGATTAGCACAATCGCA TCATAATTTCGAGATTTGACCAGCCAGATTGATTTGGATGTTAAGCGATC TTTTGAAAAGATAGCAATAAATACGGAAGCTAGTAACAATCGACCGACTT TTGAGGGCACTTTCCTATATCTAGACTTTTGTTTCGCGAATGTTTTGAGA GCCCCTTTCTTGCACATGTGGGTTTTCcgcaattaaaaaaaacaatatat attttaaaagaattatgcttttttatttcaatcgaTTTTAGTTTGTGAta ataataagattttatttttgttttgttttaacgTAATGTAAATGTAGTTT TATCGTTGATTCGACTTTTTGCTTTAGCTGTCTTTGTNTAACGTAATGTA AATGTAGTTTTATCGTTGATTCGACTTTTTGCTTTAGATGTCTTTGTCTA TCAACTCTTTCAGAAGAGTGATCGATTAGTAGATTTCCTGGTGTAGTAGA TTTCTGCTGGAGAAAGTTTTCTGAAATTATTAAATCGAGGTAATctttta aaacagtttttctaAAACATCGATGCattttgggattgtttcgggggtat ttcaatagaattccctcaaaaaattcctaagaaatttctattgtaatacc ctcgaaacaatcccacaatacatcgcttttttagaaaaatcaaaaactcc gataagatctttTGGCAGCTCTTTTGACTTTGATTTATGTTTCTGTGTGT ATTATATATATATCTTTGTCAAAATTATTATTTGTCTTGCAACTTTTATT TTGAATGTAAAAGAtgaatttgttttttgaaatagcgaaaaaaactctaa aaaagaattaaaagatgaaaacttaaacaaaat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013677TCONS_00013677Clytia hemisphaericatranscript
TCONS_00013678TCONS_00013678Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013678-proteinTCONS_00013678-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000171supercontigsc0000171:347329..356511 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
MAPK9PREDICTED: mitogen-activated protein kinase 9 isoform X1 Homo Sapiens
MAPK8PREDICTED: mitogen-activated protein kinase 8 isoform X3 Homo Sapiens
MAPK10PREDICTED: mitogen-activated protein kinase 10 isoform X3 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.25 5.14 9.45 7.59 115.35 82.82 100.46 110.61 48.71 50.25 47.96 45.63 39.73 40.86 37.91 48.36 44.21 41.42 29.39 32.65 37.49 39.67 30.89 33.82 21.42 29.53 41.01 32.26 49.57 53.17