XLOC_007636 (gene) - C. hemisphaerica

Overview
NameXLOC_007636
Unique NameXLOC_007636
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000171:98087..106465+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007636 ID=XLOC_007636|Name=XLOC_007636|organism=Clytia hemisphaerica|type=gene|length=8379bp|location=Sequence derived from alignment at sc0000171:98087..106465+ (Clytia hemisphaerica)
CTTTGACAAATATTTGAATAAGATTGACCACGGAATAATAAAGCAACCAA gaccactttcactttcatattCTTCCTGTTTCTGTTGCACACGTCAAGAT TTCAACTTCTGCATTGTTTTGCAAGTCTTTTTATGGAGAGTATTGATTTA GAAACATACAAAACTGGTCATagataaaaagattttgtttcaaaaatgaa GGTTAtctttttgtgtttgtttttgatcgatatttcACTTGGAAATAATA ACTATCCACATCTTGTCGAGAAAGCAGTATTTCCACCCGTTTTGTCCAAA GCAGAGAATTCAGACGAAGCTGTTGGGCACAAAAAGCCTTTAGGCTCACA AAACGCTCCCCAAGGTCCTATAATAGAGTATGATAAGTTCCTTGAACCAA AAACTCTGTGGGAAAAGCATGTTGACCCTCACATTCCATTAGTCTATCGA GGCGCCATAAAAGATTCGCCTGCAGTGAAAGAATGGGTGAAAGATGAATA TTTGACGGAAAAATATGGAGATTTGGATGTTTTGGTTGAACACAAGAAAG AAGATCGATCAAGTACATCTGGAAGAATGAttttaaaagactttttgaAA CATTACAAAACAGATGATCTTTATGTTGTTTCGATGTTCCCTTCAGAAAT GATGGGTGAAGTCAAGGTCAGTTCTCGTGCAACTTATGGCATGTCCAAAA AGTTTGGCGCCGAAAATTGGGGGCATTGGACATGTTcatttataccttta aagaagcggaTTTGGATATAGAATTCATAAATGGCtgttaaaaaaattga tgttaacaccaaaaaatatattaggcGGCCATCggaaaattgttctattc gcgtcactgCCCGCATCATATTTTCGCTGATTTTAGGGTGCGAAGAagcg aaaaaaaaatccaagaaaagcaatttgttctttttaaagtatagcttttt cttAATCGCTCTgacggccatcgaaaaattgttttgttagCGTCACCACA CGACCCTtgacaccgccgtacattgtacggtgtTGTACGGTGGGGCTTGA TTTAAATGTCCGGTGGGAATTAAAGGTTAACTATGAAAACACCGTACATT TTCCCACCGTACATTAAATTTCCCACCGTACTATTGTACGGTGGGAATAA GATCGCGAAAGACAAGTTCCGTGGGCAAACTTAATGTACCaaagaaagtt tttccgacTTAGAAGTTTTTCAGTAAGTCCGACCACGGTTGAATATCTAA AACTTTGCATGCTTTCTgaaactgaaatcaatttggTACGGTGGTGAAAT AGGTTAACTCGAAATCCACCGTACCCACCGTACACCCACCGTACAacacc gtacaatgtacggcggtgtccagggtcgtgtCACCACCTGCCCCAGAATT ACTGGcttaattttaaaaaatcaggAATTTTTTCGACCGTCCGTCcaccc gcatgcatttttaacacccgttgcaacgcgaacagagcattttttcgatg gccgccttagggaaaaatcgaaaaatgctgacgacagcaaaacttgtttt ttgaaataactCCAGTTTAGCGGATGGtgtaaacatgaaattttacCCAA CTATGCACATCATTAAtaggatcattttgaaaaaaaatgtttttgaaaat ttgttgacATCAGCAATTTGTTGCAAaaattcgtattttgctgatttctg ctgacatcagcaaaatttgaagaaaaaaaattgtgcaaaaatgtttctat taataatatgcaactttggtccaaatttcatgtttataccatcagccaaa ctggagtttttggtttttgcctaataacttttttgggtgaaaattttaat tctattaacagtgatttttgaattctacATTCTAAATCTAATACGCTTTT TCTATAAATGAATATGTCTAAGGCCGCCGATTTTCTGCGCCAAACTTATG GCTTTTTGGACATGCCATAAGTTACATAAgttaaattataaaaaactaac aaaaattatggtaatacTAATTTTCGTTACAAAATCTTAATGCCATAATT TTGTGCCATCATCCTATTTTGTCCTGGCCTAAATTCTGGTCTTTCTTCAA AATAGATATATAGATGATTGGATAACTTTTTAAGAAGTCTGTTCGGGACC TGTTTTTACAATTTTGCAGATCTGATAACCAAAAAGGACCATGGAAATAT CTTTCACAAATCATAATTTTAATTGAAGTTGTTACAGTTTCATTGAGTTC AATTCGGTTAGATTGGCTTAATTACCAATTTCGCTTTATTGcgatttttt gtataagaaaaatGTGTAAAACAGTTTAATTCTTGTGAAAATGTATGAAA ATGTAACTCTTTCAAAAATGAGTAACACAACTTTTCTcccaaacattttt atttttctatgttctAGGCTATTAACAGTATCATGTGCGGAACATTCAGA AATTTCACGCATGAATCCAACTTATGGATCAGTGCAGGTGGCACGAGATC TGTTGTACACTACGATGCTGATCATAATTTTCATTGCGTTATTGATGGTC GTAAAGATTTTATCATGATACCAAATAATCTGGCCACAAAAACAAATCTC TATTTCAAACAAAAGGTAATTTCGAAAAGAAACATTTTACCAATCATTAC AGAAATCCTCCTCAGGCAGGGTgcctaaaataccaaaaaaatgggGTTTG TATATTGACTAGANTCTCCTCAGGGTGcctaaaatagcaaaaaaatggGG TTTGTATATTGACTAGAATTTCTAAGAGTGTGAAAGTGCTGGAATGTAAT TTTACGTAATGTTTCAGTGTAATGTGTTCATGATTTTTGTActatatatc tttatttttgtaAGCTACAATTTATAGAATTGGTCGGAGTTATCAAAAAT GCAGAAAACAGAATCTGATCTCATAAAACTAACCCTATATAGTTGGAATA TAAATCTTACGCtcttattatattatattaccTTTTTTAAAACAGGATCC AGGAGTTGGCTCtggtttttcttttcttgatcCGGATAGTATTGACATGA AAAAGTTCCCAAAGATCGCAAAAGTTCCGTGGACATGGGCTACTCTTTAT CCTGGAGATTGTATCTTCATTCCATCAAGTAATAATTTTTTCACCtaaat tgaaaaggaaaaagacATTCAGTGGTTGAAAGTAGTACTAAAAACTAGTT TAAATTGTAAAATCACAATAAGGCTGTTGTGTTTTATAACAGTAGTGTTT GCttgtaatgtccctttaatccatttgctttaagtgtgcactcttttttt aaCGACTCTCAAACAAGGGGATTACTCTGGATTGGGTTTACACGGTTTCC ACATGGTAGCAAagaagagtgcacacttaaagaAAATGGactttaaatta taaattgactTATGCCAAAATTTTATATCTTTAAGCTATTATTATTGTTG ACAAGATATGAAGCTGAgagttttttgatttgattttgaatgATTCAAAC TGACTTACAATAaatcttttgaattttatttcattttttgcatCAATATC ttctttcgaacttttttccagTTTACATTCACCAAGTTCGTGGTTACGGA AGAACACTTGCAGTGACAACCCTTTTCACAGCTGATATTCAAGATAATTT CAATGCTGATGATTGTCCAAGTGATATTACGCAAAAAGATTATACCATGG CTGATATCAATTTCCTATGGACTTATAAGAAAGGTTGGTTTTGATAGTCT GCTTTAACACGGACAGACCAACGAAAAATACAAATCTACAGGCTTTAGCA AGTCTCTGAAATTAATAGCTTTTTATACCTAACGGAAGGGGGTCTGGAAT AAGCAGACTGGatgaaaatatttcgaaatctaATAGCTGGGAGATGTGGA CACACGAGTTGTCTTTCTGGGTTTTGTAAACCTTAGCAAATTAGGCCTTC TTTTTACAATATAAATATTTTGGAATAAACGTAATGTAATTAATCTTGAT TTCCTTGATTTTCTAGGAGACCCAACGATCGATATGGGCTACATGAACAC TGAACTTGTCAAAAATCAATTATTAGATGCATTAGATGATGACGTTATTA AGGATGGGTATGTTTACACTTCTTATTCATTTTATGGATTTGTTGGGTCC TTGAAACTTTCCCAACGACTCTTAGGGGGAGGTTGAAATTACTGACAGAA TAATGAATAGAAAGAAGCTGTATCCGCGTTACACAGGCTGTTATTTCACA TTAATTTATGAAGAATAGTCAATTTAAATATTTGCTGTTTCCTTTTCAAC GAGGAAGTGCTTACTTATCAACTTTGCTTGTGTTTCAATCTCTCTATTTT TGAGGGTTTTTTCCTCCTTTacatttctttaaaattgaatcgaaatcttg ttttcatattttttgttcttgttttgGTTCCAGAATCAGATTTTCGGAGT CACTCAAAATATATTGGTGGTTcataatttcaaatatttctataaATAGG TTTTGCTGCTTCCTCTTCATGCAGGAAGTGGTAACTCATCGACGCTgtta aatgtttcaaaatctttatttcGCAAACGGAGGATTGCCAAATTGTCATT TAGAAGGGCTCTCTTTGCAATAAGGAAGTTTTGCGGAAGTTGAATCTTCG TAAAGATTACACAATTTTTTAGTGGCGATTGAGTTCTAACAATAATGGGT GGAAAGAATTCAGAAAATTAAAACGAGGACCCCCAGTGGTACCCCTCATC ACGCAATCCCGTCAAATTTTTGCACATCACGACCACAAAAATCACCATAA TTTTTTAGCAATGACAAATAAGATTGCCTCAGGAAATGGCATAAATAGAT TTTGCTATAAATTTCTTTCGTCCTAGAGTTTTTTGATcttaagaaattct ttatttcttaTTCACACAGAAAAATGACTATGAAACAATTCATCTTATTC ACCGGTACCTTCTCACCGTACGGGCGAAACCGAACCAAAATGGCGGCCGT TTGGAaagacattttcaaaattgaagaGAATGGATATTTAGATGCTAAGA AAGTCAAATCACTTGATCTAcaccaaatgaaaattttctgtCGCGCGGTC GAATCACCGCACGGTGTTGTTACGAACGGGAGCGAACCTGTTTTTGTCCG CCCGGGCGAACGCCACAAATGGGAGAAAGCTACGGATTACGAAGAGGATG CTTCAGATCGTTAcgaagaagatgaagatgaaattCGTCGTTTGACGCAT TACGATAACATGTTACAGCACTTATCCGATGAGGAACGTCAAGCGTACAT CGAAAAACGGCGCGAGGAGAAACAGAAATTTGGCGTACAGTATGATGGAG ATCATATAGATTTGAGCCAGTTGAGTGAGCCTGCCCGTATACTANACAAA AAGATTATACCATGGCTGATATCAATTTCCTATGGACTTATAAGAAAGGT TGGTTTTGATAGTCTGACCAACGGACAGACCAACGAAAAATACAAATCTA CAGGCTTTAGCAAGTCTCTGAAATTAATAGCTTTTTATACCTAACGGAAG GGGGTCTGGAATAAGCAGACTGGatgaaaatatttcgaaatctaATAGCT GGGAGATGTGGACACACGAGTTGTCTTTCTGGGTTTTGTAAACCTTAGCA AATTAGGCCTTCTTTTTACAATATAAATATTTTGGAATAAACGTAATGTA ATTAATCTTGATTTCCTTGATTTTCTAGGAGACCCAACGATCGATATGGG CTACATGAACACTGAACTTGTCAAAAATCAATTATTAGATGCATTAGATG ATGACGTTATTAAGGATGGGTATGTTTACACTTCTTATTCATTTTATGGA TTTGTTGGGTCCTTGAAACTTTCCCAACGACTCTTAGGGGGAGGTTGAAA TTACTGACAGAATAATGAATAGAAAGAAGCTGTATCCGCGTTACACAGGC TGTTATTTCACATTAATTTATGAAGAATAGTCAATTTAAATATTTGCTGT TTCCTTTTCAACGAGGAAGTGCTTACTTATCAActttgtttatgtttcaa tCTCTCTATTTTTGAGGGTTTTTTCCTCCTTTacatttctttaaaattga atcgaaatcttgttttcatattttttgtttttgttttggttcctgTTTTG GTCCAGAATCAGATTTTCGGAGCAAtaaactcaaaaaatatattggTGGT TCAGGATCatgatttcaaatatttctataaATAGGTTTTTCTGCTTCCTC TTTCATGTAGGAAGTGGTAACTCATCAACACTGTTAAATGTTTCAAAACC TTTATTTCGCAAACGGAGGATTGCCAAATTGTCATTTAGAAGGGCTCTCT TTGCAATAAGGAAGTTTTGCGGAAGTTAAATCTTCGTAAAGATTAGTTCT AACAATAATGGGTGGAAAGAATTCAGAAAATTAAAACGAGGACCCCCAGT GGTACCCCTCATCACGCAATCCCGTCAAATTTTTGCACATCACGACCACA AAAATCACcataattttttagcaaaaacaaaTAAGATTGCCTCAGGAAAT GGCATAAATAGATTTTGCCATAAATTTCTTTCGTCCTAGAGTTTTTTGAT cttaagaaattctttatttcttaTTCACACAGAAAAATGACTATGAAACA ATTCATCTTATTCACCGGTACCTTCTCACCGTACGGGCGAAACCGAACCA AAATGGCGGCCGTTTGGAaagacattttcaaaattgaagaGAATGGATAT TTAGATGCTAAGAAAGTCAAATCGCTTGATCTAcaccaaatgaaaatttt ctgtCGCGCGGTCGAATCACCGCACGGTGTTGTTACGAACGGGAGCGAAC CTGTTTTTGTCCGCCCGGGCGAACGCCACAAATGGGAGAAAGCTACGGAT TACGAAGAGGATGCTTCAGATCGTTAcgaagaagatgaagatgaaattCG TCGTTTGACGCATTACGATAACATGTTACAGCACTTATCCGATGAGGAAC GTCAAGCGTACATCGAAAAACGGCGCGAGGAGAAACAGAAATTTGGCGTA CAGTATGATGGAGATCATATGGATTTGAGCCAGTTGAGTGAGCCTGCCCG TATACTAATGCAGTTATCATGGCGGATAGACGATATTCCGGAAGAACATC ATCCTCATATTCTACGTGGTCGAATTCCAGAGGATTTCCGGGATGAATTT TTGAGCGCTTTACCGGAGTCTTTACTTGAGAAgtatgagaaatattttga gAGAGATCGTATACCGAAAGTCATGGTAAAAGCTTTGATCGCAGCGAAGC GGGATAACTATACGAAGCGGATGAGAGAAGAATTGGAGAGTGAAGAAGGG GAGAGTGAAGAAGGGGAGAGCGAAGAATTGGAGAGCGAAGAAGAAAGAAA CGAGGAGAGTAAGAAAGATGAACTTTAATGTTTCTttttgggacgagatg gagtttttacatgctcttatttgatttggttggtcgttaaccaataataa aacaattttgttactttttctaaagaacgcgtcatttttattacttcaaa tgaccaattactaaagtatcttataaaaactccatctcatctgttcTTTT TGTGGAAGCAGTCTCCGtaactttaattttctttattttgcgAGTATTTT TGATCTGATCCCTTCACGCAACATACACTATTGAAAATCTCACTAATTGC ACACACATTTTTTTTCCACAGTAGAACTATTTCATTCTTAGaccgtaatt tttttaatttttttttgctattttgattTAATGGGAGTCTTGATATAGTG ATTTGCGTTTCAATATTAGAAGGCAGCACATGCGTGGTCTTTCAATTCAA ATGAAGCTAAATTCTATCCACCATACGTTTACAAGCATCTAGGTAGATCA ATCTCGAAATGccagaaacatcaaaatcaaagatAATTTACAGCTTGAAT GTCCAGGCCATTTTATTCCCAGTAtgtgttcgagttattgagATATCTCT GTATTTGTTAAATGTAAAGTGAGTGCAATTATTAATTTAGGTGGGAttac taattttgattttatagcaaattttgaatccaaatgAGGAATCATGAGAG AAAGTAGGAGAATTCAATCTAGAGGATATAGTCTGTCCTTTTTTTCAGGT GCTCTCTTTATATAAacaaattacttttttattctaaatttatGTATTTC GGGGTAcgatatttatattttttgataaatttttatctttttttatgact ttttcttAAACCTTCtatttataagattttttttgtcaCGCTTTTGTAAT CTCAGGTAATtaaagtttcattttattttgtaacGTATTTAGAATGAAAT ATCCATAGAAATAAATTAGAAAGCGAGCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013664TCONS_00013664Clytia hemisphaericatranscript
TCONS_00013665TCONS_00013665Clytia hemisphaericatranscript
TCONS_00013666TCONS_00013666Clytia hemisphaericatranscript
TCONS_00013667TCONS_00013667Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013665-proteinTCONS_00013665-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000171supercontigsc0000171:98087..106465 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.48 8.27 3.53 3.33 82.08 63.79 111.6 111.22 64.69 73.45 26.03 30.2 18.55 18.2 31.05 17.94 24.18 25.51 26.1 34.96 15.69 14.9 23.89 31.22 23.95 28.09 15 13.87 23.61 20.49