XLOC_007600 (gene) - C. hemisphaerica

Overview
NameXLOC_007600
Unique NameXLOC_007600
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000170:442619..451744-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007600 ID=XLOC_007600|Name=XLOC_007600|organism=Clytia hemisphaerica|type=gene|length=9126bp|location=Sequence derived from alignment at sc0000170:442619..451744- (Clytia hemisphaerica)
AAAAGATTCAAACTGTGATGAAATAACTATACTATAACTGTTGTTATCTT
TCAGGCTAGCTAATAAAAAATATGACAACAATTGCTGGACAGGAACGAAC
AGGACTCACTTCATGGACTTAGGTGTGACTCAGATGACAAGGCAACTTTC
AACCAAAAAAAAAACAGATTTCGACATATAAATTCACGTCCATACATAAC
CGAAAATTTGTTGGGTCATCCCACTAAAAGATGCGTGCAAGTATTATTGA
AACAAACAAAATATGATTTAATGTTTATCNTTGGGTCATCCCACTAAAAG
ATGCTTGCAAGTATTATTGAAACAAACAAAATATGATTTAATGTTTATCA
TGCAAACAAATCCACATGATACATAGAAGTGTATTACGTTTTGTCATGAT
GATGGTGTTCGAGTGGTATATGAGATAGATTACATTAGAGTGGTTCAACA
CAGCTGTTTGAGGCGTCAGTTTTGTTAAGCCTGAAGGATGGTTGGTATTA
CGAGATGGCTACTGTTACTAATTCTAGGTAAGTCATACTTTTTAAAAGAG
AAAATTTGATGGTTTAAGATTCTCCAAATCTTTTTGTCTATAATTCTTTT
CCAAAAGCAAGATATTAATTTTACACTCGAACGGGGAATGTTATTTCTTC
GAAAAACAGATTTTCGAATTTAAAAAAGTTGGAATGATAGAAAGTTCGAA
TAAGCGAGAGTCTACTGTACAATCTTTTAATAAGAAAACAATAGAATTTT
GACGTAAGAAACGTATAAGAACTCATATTCAGAGATTTAGAGTTGGAAGA
AAGTGAGAGTGAGACATAAAGATATGGAGGCTTCGCTAAGGAAAATGGAA
GGAAGATACAGGCTAAAGATTTCATACCATCAGATGGTATTTACTTTGTG
GGCGTAATTATATTTCTGGACATGTGACAAGGAACCTGTTTTAGCCAATT
AACATTTCTTTTTCAAATAAAAAACATAATTCTACTTGACTTTAAGTTTT
AATCAAATTATGAGGGATTTTAGGTTATTAGGTTATCTTACTTTTGTTTT
ATCCAATCGAATTTTTCCTCTTTAGGACAGTAGCGCAATGACACCCACTC
TATACAAACCTTTTCCCCTCAGAGGTCGAAACTTGTTTGTTTTTGAAGTG
CTTCTCGGAAAGATTTCTGTTTACCTAACTAACAAGATATCCATGGTGAT
GTTGAACAGATTTCTTCTTTTGAATGACTTAAAAAAAAGATAACTATTTC
CTTTTTTAGGAGTCTTTTCATCTACCCACCAAACGAATGCTATCAAATGT
CCTGACCCACAGAAATTTGGTCATGGCCCTGTCAAGCCGTGCGTTGAACC
ATCGGACCCAAACAAACGTCCTCCGTCAGGAATCGAAACTTGGTTTACTG
AAAGCGTATTCAATGATCTTTTCCCGAAATCGAATCTCGGTTGGGGACCA
GATAAATGCTCCCCATACAATTACGAAGCCTTCAAAATAGCAGCCCGATA
TTTCCCGAAATTTGGTAATGAATACGTTACAAAGAACCCGAACGGGACTA
AACTAAATACCGATTATACCGCAAATGAGACCTTTCGTCGCGATGTGGCT
GCATTTTTTGCGCACGCCGTTCAAGAAACGGGTGAAAATGATGCACATCT
CTACGACAAGCTACCTAAAGATCAAGCGGCTGACTGNACACGCCGTTCAA
GAAACGGGCGAAAATGATGCACATCTCTACGACAAGCTACCTAAAGATCA
AGCGTCTGATTGTTTTTATCGTGGTGGATTTTATAATTGGTTTGAAGGAG
GTCCTGTCTCATCTTTGGTTCAAAATCAAGGTGCAAATGTTGAGGATGGT
GTCCATTGTATTTTCAATGCACTTTATTGTAATCACTTCTTCAATAATAC
GTACTTCTATCCATGTAATTCGCATAAGGAAGGCGACTGGTATAAGGTAC
ATACATCATTTTTACTTAGCCTATTTTATAAGATTCATGCATCTGTTACA
TGCTGCAATCATGGTCGTAATATTTGAGAAAAAAGGGAAATTCTATTTGG
AAGCGCTCTAAATTATAAGCAAGTGTATGCCCCTTGGTCAAGCTCGTGTA
TGCTTAAGTTCTCAAAGCATCCAGGCTATGCTTATTATATGTTATGCTTA
TTATATGCTTATGAATCATGCTTGTGATTCACCTCGAGCCAAGTTTTTAG
TGAAATTTCAGAGATTTTGTAAAAAAATTGTTCAGATTTTGGGAGTAGAG
GAATGTAGGAAACCATGGAAAGTCTTTTTTTTTTTACTTAACCTCTACCA
AATCTTTTCAAACCTGTTTAAACAGATAAAAATGACAACTTGAAAGAAAT
CCTTAATATCAATTTTAGTTGCCTGAGGATTGCCGCCAAATGGCATGAAA
CTGCCAGTAGCAGAATAAAAAAGTGTCTTTTCTTACTGACTGAAAGAAAT
CCTTAATATAATCTCTCGTGCATACCAGTGTGTCACAGAAACTGGAAACA
TCGGTTGAGATTGGCCCCAAAGAAGAAATATCCAGAAATTTCTTTTTCTC
ATCGAAAACACTATACACAGGACTCTCATTCGCATGGAAGCCGGTAACTC
GTCACTGAGACAGGGGTGTCTGTTCACAAGAAGATCTTATATTATAAGAA
CACGAGGATGAAAAACCATTCTTGAACTTTTGGATCCTGAGATCCTAAGG
TCCTAGGTGTTGAAACTCAGAGTTAAAACTCTACCCTTTCAACTTACATG
TTTTTCTTATTATAAGCATAACGCTTATAAGCATAAGAAGGCTCACATTT
GCAGAGTTCCTAAACATGACATAAGCATATGTGTCAGCCTAAATTGATAT
TAAGGATTTCTTTCTTCTTTTAAGGGGTGTTATTTTGGTCGTGGTGCTAT
CCAAATCTCGTACAGTTTCAATTACGGTTTATTCAATCGTTGGTTACTTC
AAAACAACATCAAACATCAAGGACAGCCAATTGACCTTCTAAAAAATCCA
AATCTCGTCATCACCAAGATGGACCCTCCATTGAGTATCCTGGCATCTCT
ATGGTTTTATATGACGCCACAAAGTCCAAAACCCGCAATGCATGATATTG
TTGTCGGAAATTGGGTGTCACCTGACACAGACTATAATGGTAATTCAGTA
TATGTACTGGGCTGTCCCATTAAAAATCCATACCGGGGGATGGAGCAATC
TTTTCAAGTCGAATTTTTGAAAATGGCAAAAATTTACAAATAATACCCTT
GCAAAAAAAATTTATAATACCTTAAAGTGACGATGGACGAACTGAAATCA
GTCTTTTATTTTTAGAATAACTTTTTGCCTCCTGGGAAAAATGGGAAAAT
ATTTGTCCACCCCTGTCAGGATATGTAGAAAAACCTTAAAGACTACATAA
ACTGCGTAGATTCATTGCAGTGGTGCCTATCTAAGATAAAAGTAATTTTC
AGTTTGTTTTTTATCGGTGTGAAGAAAGTGATCAGTTGGAGAGAAAATAT
TTTACATTTCTCAAATGTTAGTAATAAATTCTTTCATTTTCCTAAGCTAA
ATAAAGCTTTTGGGTTTTCAGCAAATAGGAACAAATTTTTACGGTTGACA
CCCAATAATACAATAATTTGTATCTACATTTGACTCTTTCTAATTCGATC
TTCAAGGAACCAAAAGTTTTATTCGATTTAGAGAAAGTATTTTATAGGAC
TTTCCAACTGGGGTCAAGCTGGAGTTTTTACAAGATACTTACAAATCAGA
GATGCTTTCAGCATAGAACTTTTTTCTATAGTATACAGTGAAATTGCTTT
ATAAAATACAGAACAGATAGGAGGTAAATGAAAGATATATACCTCAAGCG
TCCCCAACACTCTCCAAAGTATCTACAACCCCAGGTCCCATGGTCCCGAA
GTCCCGAGTCGAACTGTAACAACACTCTCCAAAGTATCTACAACCCCAGG
TCCCGAGGTCCCGAAGTCCCGAGTTGAACTATAACAATACTCTCCAAAGT
ATCTACAACCCCAGGTCCCGTGGTCCCGAAGTCCCGAGTTGAACTGTGCC
AACACTCTCCAAAGTATCTACAACCCCAGGTCCCGTGGTCCCGAAGTCCC
GAGTTGAACTGTGCCAACACTCTCCAAAGTATCTACAACCCCAGGTCCCA
TGGTCCCGAAGTCCCGAGTTGAACTGTGCCAACACTCTCCAAAGTATCTA
CAACCCCAGTTCCCGAGGTCCCGAAGTCCCGAGTTGAACTGTGCCAACAC
TCTCCAAAGTATATACAACCCCAGGTCCCGTGGTCCCAAAGTCCCGAGTT
GAACTGTGCCAACACTCTCCAAAGTATCTACAACCCCAGGTCCCGTGGTC
CCGAAGTCCCGAGTTGAACTGTGCCAACACTCTCCAAAGTATCTACAACC
CCAGGTCCCAAGGTCCCGAAGTCCCGAGTTGAACTGTGCCAACACTTTCC
AAAGTATCTACAACCCTAGGTCCCGAGGTCCCGAAGTCCCGAGTTGAACT
GTGCCAACGCTCTCCAAAGTATCTACAACCCCAGGTCCCGTGGTCCCGAA
GTCCCGAGTTGAACTATAACAACACTTTCCAAAGTATCTACAACCCCAGG
TCCCGTGGTCCTGAAGTCCCGAGTTGAACTATAACAACACTCTCCAAAGT
ATCTACAACCCCAGGTCCCGTGGTCCCGAAGTCCCGAGTTGAACTGTGCC
AACACTCTCCAAAGTATCTACAACCCCGGGTCCCGTGGTCCCGAAGTCCC
GAGTCGAGTTGAGCTGTCACAACACTCTCCAAAGTATCTACAACCCCGAG
GACCCGAAGTCGCGAGTTGAACTGTGCCAACACTCTCCAAAGCAGCTACA
ACCCCAGGTCCCGTGGTCCCGAAGTCCCGAGTCGAGTTGAGCTGTCACAA
CACTCTCCAAAGTATCTACAACCCCAGGTCCCGTGGTCCCGAAGTCCCGA
GTTGAACTGTGCCAACACTCTCCAAAGTATCTACAACCCCAGGTCCCGTG
GTCCCGAAGTCCCGAGTCGAGTTGAGCTGTCACAACACTCTCCAAAGTAT
CTACAACCCCGAGGACCCGAAGTCGCGAGTTGAACTGTGCCAACACTCTC
CAAAGTAGCTACAACCCCAGGTCCCGTGGTCCCGAAGTCCCGAGTTGAAC
TGTGCCAACACTCTCCAAAGTATCTACAACCCCAGGTCCCGTGGTCCCGA
AGTCCCGAGTTGAACTGTGCCAACACTCTCCAAAGTATCTACAACCCCAG
GTCCCGTGGTCCCGAAGTCCCGAGTTGAACTGTCACAACACTCTCCAAAG
TATCTACAACCCCAGGTCCCGAAGTCCCGAGTTGAACTATCACAGCACTC
TCCAAAGTATCTACAACCCCAGGTCCCGAGGTCCCAAAGTCCCGAGTTGA
ACTGTGCCAACACTCTCCAAAGTATCTACAACCCCAGGTCCAATGTTCGG
TCAAGTCCAGCAACGTGATATAATCAATTCAAATATCCAAAATTCCAAAG
AAAAGTAAGTCCAATGTTCGGTCAAGTCCAGCAACGTTTTTAATGATTTT
AATGATTAAGTAAGTTTTCCTTGAAGTTATCCAGTTTTTTCGCGAGTGTG
CTTCTCGATTTCAGATTTTCAGATTTTTGACCATGCTGATGCATAAAACA
CTATGACCAAATCAGAAATGTTTTTATTTTCAACAAAAGAAGTAAAAACA
AACAATTACTATAAATAAATAGTAAAATATATCTTTAATTTTATTTTGAT
CATTTATATTAAATTTATTTAGATTAATCCTTAACAAAATGGACAACAAT
AGTTTTATATAAAGTCATGGTTTTGTTTCTGTATACCACGAGGTCGCTTC
GTCGCTTCACTGTATTTTCTCCTTCGTGCGCACTCGCTGATTTCTTCAAC
TCGGGACCTCGGGACATCGGGACCTGGGGGTGTGGGTTTTATTGGATGAA
GAGAACATAGCTCAACTCGGGACTTCGGGACCTGGGGTTGTAGATCCTTT
GGAAATAATAGTGATATAGCTCAACTCGGGACCTCGGGACCTGGGGTTGT
AGATCTTTTGGAAATAATAGTGATATAGCTCAACTCGGGACCTCGGGACC
TGGGGTTGTAGATCTTTTGGAAATAATAGTGATATAGTTCAACTCGGGAC
CTCGGGACATCGGGACCTGGGGGTGTGGGTTTTATTGGATGAAGAGAACT
AACTCGGGCCTTCGGGACCTCGGGACCTGGGGGTGTGGGTTTTATTGGAT
GAAGAGAACATAGCTCAACTCGGGACTTCGGGACCTCGGGACCTGGTTTT
GTAGATCTTTTGGAAATAATAGTGATATAGCTCAACTCGGGACCTCGGGA
CCTCGGGACATCGGGACCTGGGGGTGTTGGTTTAATTGGATGAAGAGAAC
ATAGCTCAACTCGGGACTTCGGGACCTCGGGACCTGGGGTTGTAGATCTT
TTGGAAATAATAGTGATATAGCTCAACTCGGGACATCGGGACCTGGGGGT
GTGGGTTTTATTGGATGAGGGGAACATAGCTCAACTCGGGACCTCGGGAC
CTGGGGTTGTAGATCTTTTGGAAATAATAGTGATATAGCTCAACTCGGGA
CCTCGGGACCTGGGGTTGTAGATCTTTTGGAAATAATAGTGATATGGAGG
TATAACATATCGGGTGTGCTTGTTCCGTAAAATACACACAAAGAAAATCG
CATCCCAGCTTGTAAAAACTCCAGCTCATCCGTCCAACTGAAGGGACCCA
TATTTTTAAGTTCGAATTACAGGGAGATTCGAATTAAAGAGGTTTGAATA
AGAGAGAGTTAACTACAGTGTAGTCTCTTTAACTCGAACCTCTATAACTT
GAATGTCTCCCTAACTCGAACAAGTTTTATTATCAGTTAACAATGCTCTA
TAAACCTTACTCCATAACTCGAAACTTCCTAAACTCCAACAAGTATGTGT
TCCCCTTGTCTGTACACAGACCTAGTATCTTCGACTAATTTCGAAATTCA
TTGCCGTAGAAGGTCTGTTGTCATTCTCTTTTCTCATTTGAGATTTTTCA
AACCGATCGCTGCGATGGAGTGTTGGTGAGGGAGGGGAGACGGTGAGAGA
AGTATAAATCATACTCCATCGCAGAGGTCTCCCTTCGGGAATTTTTTATC
AAACAGACAATGCGCACAGAGTGTACTACGAAGCGATAAACGTGAGATAC
ACTCTGGTACAGAGTAGTGTTCCCCGTGCGCGTTCAAGTTATGGAGACTC
CACCGTAGTTAGATCATTCTTTTTCGTTTGATCTTAATAGGTGGTGTATT
TGGACCAACATCTCTGGTTATCAACAAAGAATGCAATGGTGAGGATCCAC
AAGAACCTGGAGGTGGTGGTGAAAGTCGAAGAATTAAAGCTTTTAGATGG
TTTACTAATTATTTCAAGGTTCCTTTCAATTCTGGTGATGCTAAGACTGT
CTCTTGTAAACAATTCAATGGTGGCTCCAAAAGTTTTAAGTTCCCAAAAG
GTATGCTTTTAAAATCTAAAGTGTATGTGCGGAAAAAACAAAACAGGATT
TATCTAACGAAAAATTTATGATTTATGTCAACTTTAAAGGCCAATAACTT
GATTTATGTTTTTTTTCTTAATTAACAGCAACCTTGAAAATAAATCGCCG
ACATTACTGAAAAACAATTCTGATATATTTAGGCATTGGGCTCTTCCAGA
AAAAATCCGTTCATGGGGGGTGGAGGATGAATTGTCCAGGGGTATTAAAA
AAATGCCAAAAAATTGCAATGTCCAGGGGGTAAATTCNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGCGA
GTGTTGTGTAATAGAATCCTGGTGCGGCAGAGCTGATAGGTTGAAGATAT
TTTAAATTATGTTAAAAATCTATGCTGTGGGGAAGGTTTTATCCCGCTTG
AAAAAAATTTTTGCCTGCGCCGCAATAAATTTATCGAGAATTTGTATGCA
AAGATTCTTTGATATTTTGTTTTGTGAAGGCGGGGGCTATGTTTCTAGAA
TTTAGCCGGGGCTATTTTCCTTAGCCCCAACTGAAAAATGCTGGGGGCTG
GACCCCTCTGCACACTATGCGTGTATGGATACTAAATCTAAATCGTATGA
CTCATAATGAAATAAGCTTAAGTAAGGGTTCAGCCTTTGAAATGCATCTA
CTTTTCTACAAAAAGAAACTTCAGAGTTAAACCAAAAGAGGACTTCTCTC
TAGTATTGACTTCTAGTTGTTTCAAAATTAATCCCAAAGATTTTTAATGA
AAGTGTCAACTGAGGTCATTTCTATTCTATTTCAGGAATGACTGTCTATC
TATCATGGGATATTGACTGGAAAACGTCAGCTGATCCAACAATGCCATGC
ACTTGTAATATGAAAGTCTACCAAGGACCTATCGTTGCTTTTGATCCTGT
CATTATGCCACAATATAAGCATCAAAACGAGGCAAATAAAAAATGGTGTG
AAAATATTTATCAGAGAGGCTGGAATAAACAAGCATGCGCCAACCATACT
GTCACTGAATCTTCTTTATCAGAAACAATGGAAAAATTTCTGGAAATTCT
GGTATAAGAGGAGAAAGTTTTAAATCAAAATTAACTTAAAGCTTAAAAGA
TTGGAAGGGTATTCAACAGATTAAATATGTCGAAATACTTTTAAATAACT
TTTACCGGGATAATTTTGAAAACGTTTGATGTTACATGGTATCTGACATT
TACTGATCCCAATTTATTCACATACATTCTAGGCTTTTTCTTTAATATAA
AAGATATAAATTATCACACTCAAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013624TCONS_00013624Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013624-proteinTCONS_00013624-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000170supercontigsc0000170:442619..451744 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
23.31	23.03	11.54	7.46	26.36	22.8	46.88	46.98	36.54	42.6	48.49	33.72	42.33	50.46	103.97	90	27.67	30.19	92.38	93.79	33.69	31.81	30.4	31.28	35.91	37.84	11.48	9.88	78.85	63.57