XLOC_007547 (gene) - C. hemisphaerica

Overview
NameXLOC_007547
Unique NameXLOC_007547
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000168:449803..453244-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007547 ID=XLOC_007547|Name=XLOC_007547|organism=Clytia hemisphaerica|type=gene|length=3442bp|location=Sequence derived from alignment at sc0000168:449803..453244- (Clytia hemisphaerica)
GGGCGAACAAACGAACAATTTTGTAAATGAAAATGAAAAAGAACAAAAGA
AGGTAACAAATAGAAGAAGATTTCATAAGAAAATAAAGATGGCTGCGAAT
GACATGCTCAGTGAATTATTCAAATTTCATGCACAAATCATCATCGTCCT
TACCTGCAGTCTATCCATTCTTGGTAGTATCCTTATCATCACAACGTACG
CTCTCTATAAAGATATTCGTTCACCCTCACGTCACATTATTGTTTGTATA
AGCATAGCTGATATGTTTCAAGCAATGGCTAACTTATACTCTGCTTATTT
TGTAAACCAAAAGGATGAACATTTTATGGAAAATTGTATAATCCAAAGTT
TTGTTGGGTCAACAGCTATCAATTGTTCCTTTATGTGGACTATGATGCTA
GCCATTTTTCTCTTTATCTCATTGGACAGAGAGAAGCCATCTTTAGCCAT
TCGATTGATTCATCCATGGTTTCACTTGATATCCTGGCTTATACCTTTAT
TCATCAATTTGTTAGCGTTATTTCTTAGGAAGTTAGGCGATAATTATGAT
TCAGCGTCTGCTGGATGGTGCTGGATTCGAATGGATGATGGTATCATATT
TATTTTACAATCTTTATTCATTTTAAGAATATTCCCAGAATCTCCCAGCT
GCATAGGATAGTTTGTTGAGCGGTTAACAGACAAATAAAAAAATTTGTCG
GTGGGAAGGTACTGGCTAGTATGAAGGCATATGCGCTTTAAATCTTAAGT
GAAGAAATAGCCTGATTCTAATTGCTCCAAGTGAAATTTTTTTACCAATC
ATCAGGTGCTCTCCCAAAAGATAGATTTTTCTTCTGAGTGCAAACTAACT
TCTTTCTGAATTCGATTTTACTAGGTTGGGGGTTTTTTTTGGTTGAGTTT
ATCTCTACCCAAATATTATATTAATTCTTTTTTTTTGTCTAGCTCATGCA
ACATTATGGATGTTTTTGGACGGCAAGGGTTTGGAGTTGTTAACATACAT
CGTTATTATAGTGCTTTATACTAAACTAAAATGGCATCTTCAACGAAAGG
TATTAAATTTAAGGGTTTTTAAACTTTCTTCAAATCTTTATGTTTGTTTT
ACTGGTAGCTTTAAGTATTTCAGAATTAATTGCCTCCTTACCGAATGATT
TAATTCTTTCTTGTTATTCAGAGGTTTGCTATCTATAATCCAGGAAATAG
TTACAGAAAAATGCTTTTAAAACCTAGTCCCTCTTATACAGTGTTCAGGT
CGCTGGAAAGTTTGTCTGTTCAAGAAAGGGAGGAGGCATCTCAGAGGAGT
TGTTTCATTCTTTTTTGCCCCTGATTGTCAGTCATTCAGCAGTTTTCGAG
TTTTCAGTCATATAGTTATGTCCTACTATTTTGTATTTGTTGTCATGAAT
GATTTTATTAATTACTTTCTACACTTTCTTATTCTAGATTCGAAAATTTG
AACGTAGTGAATCATTCAACGAAAACTTGACACGTTTCTCACTTAAAGCA
GCCAAACAGGTGGACAAAAAGATCATTCTAGTACCTATTGTTTACATATT
GTTACGCATTTGGGGTACGGTGCGTTTCTTCATGTTTATAGCTGGTACGG
ATGATAAGAAATATAGAGTTGTAGCTGACGTCTTCATAGTTTTACAAGTA
AGTGAGAGTAAAATTGCTTTCTTTTACCGTCGTCCTCAGGTACTTAGGAT
CTGGAGAAGCCAGAAACTAGCCACCCCTTTGCAGAAAAACACAAACTCAA
TGAAATCATTTTAACGGTGGTCTTAGAAGGATGTATATTTGAATGTAAGG
CCTGATTTATATGTGGGTGGGAACTTGGCAACCACCTTTTTCTTTTTCTA
CAGAACCTTAGTCTTACTTTGGTTATCTTGCTTTTTCTGTTGATTTCATA
AAGACTCTCCTGGATGACTCATCTCTTCAAATTGGATGTGATACAACCCA
ATCTTGTTTAGCTCTAGTTTAGACAATCAACTTTTCGCCCTGTCTATTCT
TATTGCGAATTGAAGTTGGCATCAGAGAGTTGGCTGTCTAAAGTCAATGC
ATTGCCCTCGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTAGTTATTT
GGTGATAACTTGGTTGGATTTGCAAACTGTGTATTGTTTTGTTTCCTAAC
AGTGAAAATTCGAAGACATTTAAAAAGTTCGTTGTCTCGAATGTACATCA
AATGTCGGACATGTTACCGGCCAGACGAGTTTAGTTATATGGATATTTCT
TCGGATGGAGAATTAAGTGAAGATATGTCACTTTCTTCTACATGATACAT
ATTCAAAATGAAGTCATTTTTACTATCTGATAAAGGTGGAAATGTGGAAA
TTTGCTCCAAATTTGAATACGCACTATAAATAAATATGAATATTTTTATT
TGCATTTTTGGATACACTTTTGTTACGATAGATTATCGTGTTCACTTTAT
TATGACTACGTATTATATTTTACAGAGACCATTTTTATATTATAAACAGT
TTGGAATTTTTAACCCTTTCAACCCAAAAGCTCTTTATGAGGTTTTTTAA
AAACACTATGATCTGAATATGAGATATATCCGGAAGTCATCATTGAGAAC
TTAGAACTGAAAGGGTGAAACGAAAAATTTTGTGTAGAATTTTTATAATT
TTGTAAATGTTATAAAAGTTCACTAATCTAACAGCACTAATTGATACTAA
TTTAAAAAGTCATAATTTATTTATTTAAAATCCTGGTCTTGCTGTCGCCT
AAACTAAAGGCAACCCTGTGTCACAGAACCGTTTGGACCCCAGCCCCATT
TGGCAAAAATTTCGTCTCTGGTGGTGGAAAAATACCCTAGAATTTCAGCC
CCACTGGGAAATTCAGTGTTTAAAAATTGCGCTTCAAAACCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013519TCONS_00013519Clytia hemisphaericatranscript
TCONS_00013518TCONS_00013518Clytia hemisphaericatranscript
TCONS_00013517TCONS_00013517Clytia hemisphaericatranscript
TCONS_00013516TCONS_00013516Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013517-proteinTCONS_00013517-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000168supercontigsc0000168:449803..453244 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.07	4.39	1.63	0.8	0.93	0.9	1.2	1.46	1.83	1.48	2.26	2.36	1.33	1.91	3.04	3.79	6.4	8.79	1.79	1.86	8.93	7.12	6.57	6.54	3.76	5.7	29.42	21.66	5.62	7.33