XLOC_007413 (gene) - C. hemisphaerica

Overview
NameXLOC_007413
Unique NameXLOC_007413
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000164:55227..61709+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007413 ID=XLOC_007413|Name=XLOC_007413|organism=Clytia hemisphaerica|type=gene|length=6483bp|location=Sequence derived from alignment at sc0000164:55227..61709+ (Clytia hemisphaerica)
gtaaaaaaacgaaaaacgaaaaacgaaaaacttaaaaaatgacAATACTG GTTACCTGGAAACATTTCCTGATAATATCAGTGATAATCTTGAAAACAAA CGCTGTACCAGATTTGGTCCAATTGAACACCAGAGGGGGTGATGAAAACA AATTTGGAACAATGATCGAATTTGCAGGCGATAAATTTGAAGATGGACGT GTTGAAGCTGAAAACGAAGACTTTGTTGGGAATgggatttccaaaaatat tcacGAGATTGTTGAACAGAATCAAAGAGGAATTTTGAACAATTTACAAT TCTTTGGTCAGCCTTTTGTAAGGAATAATGATGGATTTATTCAAAGCTTA ATTAAGGTAAGTGACTTTACATAACTTTAGATAAATGACAAACTTCACAC CAGGCAAGTTTGCAGTCAATGAAGTCAGGTCCggtggaagcggggagact ggagagacttcagcctccccgcCTTTGagcggttgttccgccgggcctgt aaGTGATTTACATAACTTTAGATAAATAAACTTCACACCAGACAAGTATG CAGTCAATGAAACGTCTCGCCGTTCATTTATGATTATCCCAATGAAACTA AACTCCGTTGACACACCTTTCTGAGGTTTATCGCCCCTAAGGACTAAAAG TAACTCCTATAATTTGATTGTCGACTGCCATTGACATTCTTGATGTAATT CAAGCATGGGTAAATCAATttatcaagggtaagtggagaaatccagggaa ggGAGTGGCACTCTCCCCTACTTTCGGGCAGACAGATAGAGAAAAGAGAG CCTTCGGATCGCCCtcaactgcggtcgcaaacttacttactttacttaCT TACATCAAGTAATAGACCACCGtccgaggtagtgaattgtgtcacttcgt agggcgccccttagatcagggcaaatttttgatattatgcccctaatagg gtgtagaattgacaaaaaaatttgcccttcgaatctcctgcagttttcaa ATAAATCGATTTTCAGTTAATCGATaaaacttatcaagggtccctttact aacggttttaaTCATTTCCAGGTACATTACAATGGTTTTTTCTCAATCGG AGTTGAATCGACTCAACAAGCATCAAGAATGACATGCCCTCTTAATAGTA TCACGCGAACCATTGCTGGTAGGAGGATAACCATTTTCAGATTTGTTGGN CTCTTAATAGTATCATGCGAACCATTGCTGGTAGGAGGATAACCATTTTC AGATTTGTTGGAAATTACATCGCTCCATACTGGATGAGATACATTCAAGG GTAAGTGTGTTAGAATTTCAGTGGCGGTGGCCGAATGGTCAAGGCGTCAG CGCCTGAAACCAacgatccccagttcaaatcccCGTTCCTTCCAATGTTT CGTTCAGTTAATAAATAGCTAAGCCACCTGGCCGTGGAGCCTGtgaaaaa aatcgagaaaagtTCTAAATTACTGGGTCGTCCATGTTAAATATCGACTC TAGAAAAGGGGTAGCCTTGGGGGGCATGCATTAAATAGACTTGATGGCGC TGGTATGGGCCCGGCGTAGTTTGGTAGTTTTGCTTGAGCAAGTATCAAAT CCATACTACTAGATCCAGTCCTTTTTTTTTAggaaaacaaacagaaaacc atgatagattggaaattttttttctaaagttggACGTGTTTTTAGAatgt tttcttgttttgtttttatataattattaATTAATATAAAATACggcatt aaaaaaaattcaaaatagcgatatcctctagtctacttcactgctCAGTC AAAAGTAGACCCTAGTCTAGAAAGGGGTAACACCTTCACCCAGAatagca ataaaaaaaatttaagtttgccaTCTTAAGGATTAGACATAGAATTAGAa ttatgaaatataaaaaaggtAAAAGATCTGAATACTTTGCATTGGGCCTt tccagaaaaaagtaatgGGGTGTAGGATGTAAGTAACTGATCTCTGGTTA ATTGGCATGACATGAATTCGTTGTATATAACTAGGATGGTGGCCATTGAc ttctaagcccgaagggctagacacaagactcctggatgggaaatgaagtc aTATAATTCCCATGCTAAAGGCGTGACCCTGGTAGCTTTCACACAAACGC TAGATCTGTCATTCTAAATGTGGCacaaatcttaaggcttcactttttct tgtttgagaaaggttgaagattcatctctagACCCtttggggctttaaac tcaatgggtgaCCCAAGTGTTAACCCCATTTCTTTACTCTTTCAGAACGG TTCATAGTTTTGTCCTTCCTGGAGGCCACAGAGCAAGAGATCTTATATAC ACTGACTTGACGCAAGGAGGTTTACTAAGAAACACACCTCAACAAAGAAA CGATTTCATTCGTCGAGCACAGATTATTGTGATCACCTGGTTGAAAATGA GATCATCGGGATCGAGAAGTGGACTTAGGTTCACGGTAAGTGTGTCTACT GTTATTTATcgttaggcgaaaataaaaaaatgtagtgtttccagaaaccg gccgggtgagaaaacaaattttattgacccggccgcagactttcgttagt agttgatatattagtattcagggcttacttcatattGCTTGTACATACaa tttatctttaaagttctatatcaatgatcttaagttatcaaaaatagcaa aaaaaaagttttttcggccggccgcatgagaactcttttccttcacccgc attccggaaacactacatttttttattcttgccttatTTATCGTTATTTA TCGGTAAGTTTGTTATTATCGattgttatttttcttcttgagcaaaatat ttcatcgaTTCAccgttacacgttttttataagaacaaactatataagaa catacgaggcttcgatgaccaaaatattaagaacaagttaagaacatttt aagactcgAGAAGACCTAACTTcgtagaaaatggaaaaaaatactcacaa atggtaaaaataagaatgaagctcaaaaagttaatgATAAGAGgatgatt ttacaaaaaaacgtgtaaaagttTTTCATGTCTATTTGTGAGTGGTTTTC TATAGTGGGTTTAATTAATATGGCTCAACTCTTAATTATCAACTTTATAC TAGAATAGaagtaaaatttcaatttcaaaacgtATCCGGCAGACAAGAAA CAAAGTCATATCCGCGGTCTGGATACGAgccataaaaagaaaaaaaaaca gacatcGCTTAGACTTCATTTTAAAACgtaatgaaaaatcaaaatgacgt catctttcGGGATGAGGAAGTACTGAAGCACACTTCCTACGTGAATATAT TCTGCGGTGATTTTAATCCCTACTCAATCAACATTTTGAAATGGAAAATA GAATTCTGTTAATTAAACgatcattgaaattttaattcatttttaattcA TGTCCTTAAGGACGGATAATCAGTTTTTTACAAGTGAAGAGCTAATCTTT GTTAATGACATACTCACAATCAATCAGCGATTATTCATTTCAATTAGGCT ACATTTTTCATGAAATCAAGCGTTTTAAAAGTGGCTTTTTAAAACCTCCT ATTTCAAATACTGCGATAAGTCGtgtacaccttttcgaccgtagccgcca attgccgcgtgggCATTTTTTTGCCTGTTTTGCCCGTGGACCCCGGGCTA TCTGACATACTGACTAACTTAACatactttttctttgtcatcTTCCTTTA GAGAGGGAAATTAAACACCTTCCAAACATTTTTGATCGCATACAATGGAC AAACTTTCGTGCAGTTTTATCACCGCTCCTTGGATACCAACAGGATAACC GTTGGCGCCCAAAAGTGTATTGCAGTGGTAGGTTTTTGTTCCTTCAAATG CTTTGACCATACTCAATCGAAAATATATAAAACATGGTCTGGAAGTCGGG TTGTTTCTAATTTTGAGGTTGATATTTTTAATCCATCGATACTGATCACA TGatcaataaaatttaatttcttgttCCTTATTGTGAAGGTtgaatactc ttaggttccaaataatcggggggttcgaataaaagggggggttggaaaat tttccaaattttaataaacggggggggggacctattaccggggggttgga aaattttccaaattttaataaacgggggggggggcctaataaggtccggg ggggttggaaaattttccaaattttaataaacggggggggggacctaatt gccggggggttggaaattgtacttctaaaacccaaaaataaggtaaaaat aggctaaaatcaggctctttagagcaaaataaggggccttctctttgaca gctgaaaatattcttagcgATTGATAAACGgagggggggtcctaataagg tccgggagggttgaaaattttttgaaaaattaacaaacgggggggggtcc gtttatttggaatctaagagtataatttttatttaaaacctTCTGGTCAT TCTTTTCATCATCGATGACTGCTTTGATTGAATATAATAATTGACCCTGA AATTGTCGAGTTGAgcttgtgaatgttttctgcacaccacgctgaaggga tgtgtgaaaacataacaatctgacgaacaTGCAATCTCGAAGTCGTAAGG ACCGTGCTCGTCTAAAAGGACTTagaacgacaacaaagttgcgtcactgt gtttatgaatagggcgccgtatcagtttttgactttccggcgcacaacaa gattcttgctGTAGAATTTTCCGCAGGAGGACTGTTTTCCTCAGAGcctt caagcgccttcagaggtttaccgtgcgcgtaagaaaattatgaacagctg ttatcaggttaattTTTCATGACTCGACCCAAACCTTACTTCATATTCGA CTAAATATATTTCTTATTAGGATTTCACTTGACATTTTAGCATGCGTTGT GCAAATATTAGGCGAAATTTTccactttaagtcgtcttgttttcttttgg tttatcgatattatttattttttagattgGGTTCTCACGAGACTCTGATG AAGTAAGGGGAAGACCTCGGTTTCAGTTTCCATTTGGAACTGACCGACTA TTGGATTTATTCCATAACGTCCCTCAAAGCGTGGAGTATTACTCAGATGA AAATCCATTTGTTGATATCGGAAGTTATGTTTTCAGTTTGAACCGTAATC TAGGTAAGGTAACCTTTTATCTTGTCCAGTGGATACACGCTTTTCgtata aattaaaaatcaagAAGACTAGTTGCCTCttgcaatgggcttttccagaa aaaatttgaatatgggggttaaggatataatattttttggaaatttaccc ccccccggacattgtgacttttgacccccggacagaaggtcttaccccct ggacaagcatcagttgaccccctggatattcaaaattacccccaaacaga aaagatctacccctggacaaaGCAAATTATGTAGATTTTTCTataccccc ggacactatatcctccacccccatgtacaaatattttctggaagagccca atttacCATTTCGATACCCTCACAAGAAAAAAGGTGAGCTGTGATCAGAG GTTTACGACGAGATCTTCTTCTATTGTGGTTCAACATCACTCAGTCTACA TAAACTTCTACTGAAACGTTTTAGAGTTTGAATTTTAGCTCGAAGGAAAC AGCTATtaggggggcgtacgggtttgacggtgtgacggtattaacCCTTT TTCTGTCGGCGTTTCGGTGTTTGCAGAAAAAGGttacggtatttcggtgt caaacatgccatgcggtggcaaaataaggatttttgtattttttttgcta tcggtgttgacggtaatccaagaaatatgcgtcggtatttcggtgtctgc gacccccgtacgccccctCTATTAGTCTCTAAGGCCGATACTCCATCTGA AGTTAAAGTACGATGGATGGAGTCTATAACTCAAACGCGCACAggaaaat ataaatttgtttgaggtaaggaaatttcgagttatggagtttATTAAGGT TTATATATAAGGTAATGTTAACTGAAGAGATCAtaaaaattgttcgagtt atagaggttcgagttaaggcAAGTGTTGTTGGTTCAACATCGGTTGGCAT AAACATCAATAAAATGGAGGTCATTTTATATCTGTTTATAGTTTTAGCTC TAAGAAGCTATTAGCCTTTTAAAAGAACAGTCTTGAGGACAAAGTACTtc ataacaaaaagaaagatgTCGGAGAAATTTCTTTATTCCAATTATAGTCA GCCAACCACAAGAGAAAGATGCTGACTGTCGAAATGTCAACAATAATTTC AAATGTTCGTACAGAGTAGAGGCTATCAAAGCTGTTGAGGAAAAAGCAGC CCAATCAGGAAAGCGAAAGAGACGTGATGCACAGGCTGGAGATTATTATT ATCATTCAAAAACACCACTGACCACTACACAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013272TCONS_00013272Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013272-proteinTCONS_00013272-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000164supercontigsc0000164:55227..61709 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07 0 0 0 5.57 2.58 0.99 1.42 0.14 2.03 1.02 0.22 1.14 2.39 29.32 9.81 1.66 0.83 0 1.35 0.1 0.05 0.12 0 0.04 0.16 0.05 0.05 0.04 0.04