XLOC_007271 (gene) - C. hemisphaerica

Overview
NameXLOC_007271
Unique NameXLOC_007271
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000161:17657..23371+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007271 ID=XLOC_007271|Name=XLOC_007271|organism=Clytia hemisphaerica|type=gene|length=5715bp|location=Sequence derived from alignment at sc0000161:17657..23371+ (Clytia hemisphaerica)
CAGAAGTAGTCATcagtaaatgaaaaaaacatttaatatcttcattaaaa aaatcatggatTTTGAACACAAGAACAAACTGAAGAGGGATTtctataaa ttatttttcaaaatcttggaCACAGAAATTATTGATGCAGTTTTACAAGA ATGTAACTATAATGGtatgtttattttttgtttatatacaAAACTCAGTT AcagtattacttcgaataagcgccccttcttttaaacatcCCCCCCCTcg actcgggtaagttatggcatgtcttaaaattatcataatttttagatcgc attagctgacagaaaacgaccaaacaaacgactgaacatgaagggtgcta tgatgtagtttctaacctgatgtgtaacctaaaaacaattaggttacaca tcaggattgaaactacatcatagtacccttcatgttcagtcattttctgt cgactaatagTAATgtgatctaaaaattatgatacttttcagtttttgag acatgccaaaACTTACCCGaggaataaacgcccctcctattTGAGACAAG TAGCTGCAAGGAAGTATAATATAAAAGCAAACTTAGATAATACGATAATA ATTGTATTCTTTTAGTATTCGAATTGATTTTGACCCGTTTCTTCATCCCT AAGTCGATATATTTATACtcgatatatatatataacgAAAGAGCAAAATA AGGTTCCAATTCAAGCTATTAAAGGTTCTGAATTATTtgataaacgcccc cttctttttaaactccccctcgaataaacctcactaaaactcaaaaattt taatatttgaagtaatacggtatatcGAAATAAATATTGCAGAAAagttt tcttctttcaaatcATCTTTATCCTGCTTtatcttcttttctgtttaacA AGACAATAAACGTGTTATAGAAGAGAGTGTTTAAAAACCAAAATgtagaa caaaatatttttccactAGTTTCCAGAAAGATCTTGATCAAAATTCCTCT TCCAAGACAATTTGTTGTGATAAACAAGCCTGAATAGTGAGTTTCTTGTT TAAAATCTCAATAACTGATTGTATGTTTTCTAAATGAAGATAAGGGTGTA ATGtgattctttttgtaatttttagagCACCAATCTTATGAACAACTGGC AATGATTTCAGGTCAAAGACGTAAGTCATTGATTTAACGCATCCCGTCAT CACGTAACACCCAAGTGGTGTCCATCTATAGACATTTATGTTATCAGAAT AACGTTGATATATCGTTTTGTGCATAACTTTAGCTAGCTGGGCAAGCTCA ATAAAATCCAAAAGTCAATGTCAAATCATCAAGTCCGAGTGAAATCTTTC AAATCCAAGTAAAAAACTCTTGTCAGAAATATATAGACTTTTTTTATCTG TTCCATATTGTTTTAGCTATTCTACAAGCAGACGTGCCTCCAACTGCACC TCCTTATTCTCGGTATACTGGTTTGCAATCCAACCCACAACAACAAATAC CTCCAAACGCACCATATCCCCATCAACAAGCCGCGCAGGTGTACCCACCA CAGCAACCTCCAATAGGGCATTTTCGTCAGCAGCAGCAACCAATATACCA AAATGCTGGAGCAGCACCTGGTGGTGGTGTGGGTGGTCAGATTCAACCAC CACCCATCCAACCAAGATTTGTACCCAAACAATTATATCCTCAACAACCT CAGCCAGGTTTTTAATTTTCGTAGTTTAAAAGCTTATTGTTTGTATTGAT ACTTCATACAATTTTCCGGACAAAACAGTTTTAGAATTTCTAAAAACATT ATCCTATTTAGCTAACCCTAACTTACAACTAATCTTAACTTAAAGGAATA ACcagtgttttttatttatttttcagatatATTTTTAGAGTTGGTAATTT AACAGATAAAATGAATTTCCTAACAAAATTTTCTACGTATTGATTGTTTC AGGAGGAGCAGCCAGGGCGGCTACCCAACAAGAAAGAAGACACGAACCTC AGCAGCAACCAGTAGCAGCTCCAAGAAGAAGTGTCCCTGCACCGCGACGT GGGAGTGATAGCGATGAGGATGGAGACAGAGCTCTCCTAACATTGGCCAT TAAACTACAGTTACTGAGAGTCCTGGTTGAGCAAGGAGCTGGTATTAATC GTTTTAATTCATATTCTTTATTTGAGAATAACTGGTAATTATACACTTTT GAGAATCTTGATGTCTAtttattaaccctttaactaCCAATAACGAGTAT Actagacatgggctatataggagggcgaagccctcctgtaatgcccagtt tgagttagaaatcgtcatttttggtctatctcgtaggaattggattgggt ttcagggtcaaatgaaaaaaaatcaaaagtgagtttttccagcgagattt taagccaaaaagtcaaaaaaatgcaaaaatctgacaaaaatccacttttt taagattttgaccgtttttggtcaacgagtgattcaagaacctccaaaat tagccctgctttacttgattctgacctctagcgaattaatttgaagtttt actactgggcatctttctatcattcaggcaggtcaaCGCAGCGCCGTagg cgcctaaaagaaagaagagactctaagctatccaacgagctatgaactag cttctaactccttctagatccggagatataagcctttaaagtttaaacta gcggttttctttaaaaaacttagaaaaaaatgaccgtggtacttaaaggg ttaatactAAAGTATAATCGAATGAATATCATTCAAAAGTATCTTTTGAA GAGCCGAAATTTCTCTAGAGCGTGGCATTTTTATCTGTCTATGTCAGTAT TCCAGGATTTTAATTTTAGCAGATAACTGAATTTATTCATGTATTttaga tcaaaagaaaaaagatagcGATGCTCCTAAAAGGTAATATTCTGTTTCTA CCTTTAACGACATACGCCCTAAAGTTACTTCACGCATTGTTCAATATCAT ACAATTCCAACGACGACAGTCTCTAAAATAATCCTTAAATGACTAAATGA CCAActgcttaaaaaaattttctccactTAATTTTCTTCCATAAAGGATC TAGTACAATTCAATTGTTGTGAAAAATGGCCACAGTCTCAGTTATTCTAA TTCGCTATCCAATTCGCTATAGCCGACGTAAATGTCTACGTAAATTTTGC TTTTGTCTACGTCAAAATGCTTACTGTACTGTAGAGCCCAGAATTTTTTG CCGACGCAAATAAATCTGAATTAGAAAGGCTACATTCTTGATTTTTGTTA TCTTTTCCAGGGAGTTAACAGCTGGTGAACGTGATTTTCCAAAACATTGG CCACGCAATGATCGATCTGTTAATATCATTCCAGTTAATGGAGCACTGTT TGATAGAATCAAGGAAATTTTCCATGACTCCAAAACAGGGATGAAAGCAA ATGCAAAGATGAAAATTTGTTCTGTAGACGAATTATGTAACATGAAACTT TATGAAGAATTTATTGTGTAAGTTTTGCTTTTCCCCATTGGTCTTTCCAT TATAAtagtatgtttttctttttataagcgcATACTGACACTTGGATTTG GTGAAAAAGCATATCAGTGAGCTTCGGACATTTATCAATTTAGCCATGGG GTTTTGTATTTGGGaagtattttgtatttttccattttaaataaatctct ttttttttcagaaaaataagcatatcacAAACATGATTTAATCTTGATTC CAAAATATAAGCTTATCATAACTGACCTTTTCCAAAAGAAGTATGCTCAT AAAAAACATGAATTTTTCTGAAACAGCAAAGAGCCTGTCGTCTTAGCTCA TGGTCATGGGTGAGTTAGGCTAAAAGTTAGTATAGGACCTAAAGGtggaa tcaaaaaatttaataaagttgtgtaaaagctcaaatttatcaaaagaaTT AATGTTTTtcagttgttgtttttttacagaCAAAAACATTGTTTAGTGAA TGACAAGAAAGATTTGAACGAACGAAATCTATGGTACCCATCACGCGATC AATTTGTTGAGGAGATTTGTCACAAGGGAATCGATTTCTCAAATAATCTC GCTGACGGACCCATTGGAACTGGCAAATATTTCTTCCTTAACGCAACCGA AGCGCACGAAAGAAAGGCCGCTCACCGTTACCAAAAGAATACGATCGCGT ACATGTTTTTATGTAATGTACTGGCAGGTGATATAACAAAGGTATCTgcg tattttttattttttttggttgCATTCTTTTTGCGACTTTTTGACCCACT TTTAACATTCCTTATcatatttctaaaaactttTCTTACTTGCAAAATCC ATATTTAGATacctaaaaaagaaaagtaatgtTGTATTGTAACTGTTTTA ACTTTTGCTTCACAAGAAAGAACAAATCTGTGAGTTGGCCACATGCCTCA CAAACAAAAAGGACTGATAGCGAGAGGGAGTAGCTTAGTTTGAGTAACCC TATTATATGAATTTGCTGAAAAATTGGCTGATTTACAAATTTTTGTCAAC ACGAAAATCTCGACTTTTAGTGGTGCTCACTCGAATTATAATTTGAATGG CAGGCTTCTTCAAAACCAGCTATGGTATAAAAAGAACAGTCTGTAAGATG ATAGTGGCAGCCTAACTCGAAGTGTAGgaattgtatttatttttcttttc tttctcagACTGGGCCCGAATGTAAGAAAGTACCTCTCCATACTGACGGG AGATCTTATGATTGCTCAGTGGACAGCATTTTAAGACCAGAGCTTTATAT TATTCACCACAAAATGAACTGCTATCCAAGATATCTAGTAACCTATATGG TTGAAGAGTAGTTCAAATGGTAGCCTCCTACTCtgatcttttcaaaaagt tacgactttatgattttatttattaaaaattctaCAAAACGAGGAGAGAA GTTCTAGTCAGCGGAATTCTatcgttttgcataagattccgATTCCCGTA CTAAGATACCACTGACTTTCCCGGTAGAATTCTGCCTTTTCCGGACATAG CTGGGATAAGATTGTTTTTCCGCTGGAAAAATGACAGTGGAATCTAAGTC TAAGTTGAAGCTTAACGACGCAAAACGACGGTATGTCATTTTTAACAATT AAATCAAACTACATTTTCGATGTCATTTAGTCGAACCGAAAGAAAGCCTT GAGTAAacaatatttttgatatttatgacgtaatcttttatacagaAACA CCCAGTGTTTTTcgtgtgtttccgtataaaagattacgtcataaatatca aGAATATATTTGGACTGTGGAAcgtggtttaaattactctctgtaattcg aatctttctttaatttgaatgaaacttttggtcccttgaagatcgaatta gagagagagagagagtcgaCCGAACATAGTTCTATTCAGGGAAGGGTGAT ATGTCTTAGCTTGAAACATTATTGAGCCGGCTGTATGTCTTTTGGATGGA CGATTTTGTCACACCACAGCATTtatttttttggataaaattcgtttttt tttgtaagactTGTAAATAATAGTAGGTAAAATTCCTTCCTTTTTGTATT ATATTAATATGCTCACAAtgtttttttgcattttataGAGTATATTATAA AGTTTTAGAATAATAAAGCATGTATATTTGATAGATTAGATACTCAGAAA ATTGTGTAATAAGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012942TCONS_00012942Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012942-proteinTCONS_00012942-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000161supercontigsc0000161:17657..23371 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.87 3.17 1.42 1.72 8.56 6.71 7.35 7.42 4.55 7.64 6.31 2.93 8.74 8.75 5.53 6.47 8.1 7.06 7.93 9.82 8.05 8.28 8.23 9.3 9.03 9.71 7.03 5.05 5.37 5.1