XLOC_007231 (gene) - C. hemisphaerica

Overview
NameXLOC_007231
Unique NameXLOC_007231
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000157:509565..514674+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007231 ID=XLOC_007231|Name=XLOC_007231|organism=Clytia hemisphaerica|type=gene|length=5110bp|location=Sequence derived from alignment at sc0000157:509565..514674+ (Clytia hemisphaerica)
AAAATAAAAGGATTGATTTTAATGAAACATGAAATTTAGACAAttgtttt
tgcattttgatAGCCAGAGTGTCAGGTGTGATGTCTAACCtcctttcaaa
aagttttcactaCACTTATACAGGTGCTTGATAGCAAACAAACCTTCGTT
GTGGTGTGTTACGGCTCGTTTTATTGCTGTGCTAAATATAGACTATTTTC
CATATATGGTCAATTTGCCACAGTGAGCGTTTGCgttaaatgaataaaaa
aatggCACCATGTTGAATCACTAGTCAAGTCACATCACTGCTCTTTCAAA
TGCTCTGCTGTGATTTCACTTGAACATATTTTAGTTGTAATTAAATTTCA
TTTCTGAATGATGCAATATTGATTGGTCAGCATCAGATGTCTGAGTGGTT
TGATCGGCCAGGGTGAGGTTGGAATATTGACTGTATTTTATATTGTTCAC
CTTTATTTACTTCCAGATGATGTCATTTGAACCTTATTGAACTGATTTTT
GTAATTGGACCATCAAATTCTTTTGAACAACGGATGGTCAACTACCAAAC
CAGatcgaacacctatcgaacTTTACCGCAAAAACCTCTTGATTAATTCG
ATTTAGTTGTATTACAGTTAGGATATTAAAAATTAATTGTAATTGATTTG
ATTGCATGATCAGAGGTGCCGTTGAAAGCCTCATGCTTCAACATGtaggg
cagaaaacaatcataaTCTGGATTTCAGGTGATCAAAATCAAACACATCG
AACTGCGATTGAATAAatatcgaaccaatcgaactgtTATCAGATTACTA
TCGAACAGTAATGGGCTGTTCCAGTTTTAGTTTATTATCCTCTAGTGGAC
ATGGAATTTCCTtagcaaaaagtttagaaaaagtTGCAGAATTTCTGttg
taaaatcccaaaaattcctaaaaattcatggaattccgatacttcGGCCA
CAAAATTGGGTGAAATTTATGGAATTCTGATATCTTTTGCTTAAAAGTTG
GCTGAAGTTACTTAACAAatgtgatttttaaaatttgtgtCATCCACTAG
GGGATAATATGCTTTTTTTCTGCAACAGCCCAATGGAACTTTACCAGAAT
TTCTTGGTTCAATTACTCTTCAATTTGGTTTGGTAATTATGTGGCGAAAA
TGGGCCTACCTACAGGCCTaatgttgtttgtttttttttcaaatctcttt
AATCACCAAAATACTTggtataataaaataaaaaatataaaatatctcTG
TTTTGTTTACAATGTTACACAGGTtatacatttttctttcttttttttat
atatacatATGGGTGTTGTGTGCCCTATAGAAAAATCACTGAGCGGATGT
AGATATCAGGGGAATCCccttcgaaaaaataaaaaataaaaattgtacGC
GGACCTAGATGGAAGCATAAGAGAATAATTTGTTGTATAAAAATACAGTT
AGCTAGATTGAAATGAACACCTAccatgaagtcgggtaacttgcatcagt
ggaggctaacatgcatagccctcaaatgaatgagcTGGCTGttccttaaa
atacaaactttaagttaaatcaaaacaaaaatggtagagtagagctgggA
GCTGAGCTGCGtaattcatttgttttgaaattttgctgcaataTCATTAT
GCAATTGATTTATGCATGACattacttttattattattattttatttaaa
ttgACCAGAAAATGTTATCAAACAATAACACACTGTGCAGCTACCCTGTT
TGATTATGTCACCCTTAACCAGGAGGAAATATAGGAGTGAAAGAATCCCT
TATTGCAAataatttgatcgaaaataAAAGAAGATTTAAGTGGTCATTCA
CTTTCAGATTTTTCAGATAGGACCTTTTCGGATTCCTCGACTTAATTTCT
TGGAAAACACTGAATCCTTTTAGTAAAGCAGCTCAGGTTCTATAAACAAA
ATTATACACTGTATAAAATTCTATATTATATTGGCAGTAAAGCTGACGTA
GACCTACAGgctaagaaacaaaaaagtaaaatgagtACTGAGCAACGGTG
TGACTTAATTCATAGTGAAATAGGAGGCAAATAAAGGACAAGGAATCCTT
TGTAAGCCGTGCCTTTCTAGTTTACTttcattattcttttactgTTTAGG
GATGCACGTGCATATAGTTAGACATGTCCCCGATAGTTTACCAACACAAT
TACcaccaaaaaaattaatcacACTAAACAAAACAACCATTTTTATGTTA
TTCACGTAATCACAGCAATGTAAAAACTTGTTTACTTCAACACAACAATA
TAATATCGAACTATTTGCCTTATTACTTATTCGCACtgatgaaaatttag
agaatgATTTATTCCTTAACCATAtctttattaccaaaataattttctat
atAATAGCTAAGGACACCATGTAATGACCTGATTTACTTTGAANacacct
ttcccgtaattcaaatttctcagaaatggcccgggcaaatgtgcgctcca
ccgttgtgtataaaattgtttgggaggtaaaaaacgcgtttttgcctgcg
aggggttagggaaagtgggatttgagcctctaacttttgacagcgatctt
cttttggcaaaatattttcagggtggtataacatcatgaatagattgaac
atactaaaatttgaggggattttgttcgacagaacttaagaaaagctcaa
aaaacctactttccctaagggaacgcaggcaaaaacgggtttgtttacct
ccagggaccaaacggtggagagcatcaaaataatgcgcgcgcattagttt
taggaattacgggaaaggtgtattgaatatggatataaataatttgaaat
cacctcacatgtacaattaaaatttttcttgaacttggagattttcttcc
ccgcgtgcattttaaaacgtggaaNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgttatctgagat
ttaaagcattttgaaatcttttgaggacatcaattattattttaacattt
gtaaaggaaatatttatccgcatctttgcggctcttgtatTGGCAGTAAA
GCTGACGTAGACCTACAGgctaagaaacaaaaaattaaaatgagtaCTGA
GCAACGGTGTGACTTAATTCATAGGAGGCAAATAAAGATTAAAGGACAAG
GAATCCTTTGTAAGCCGTGCTTTTCTAGTTTACTTTCATTATTCTCTTAC
TGTTCAGGGATGCACGTGCATATAGTTGGACATGTCCCCGATAATTTACC
AACACAATTACcaccaaaaaaattaatcacACTAAACAAAACAACCAAGG
AGAATGTTATTCACGTAACCACAGCAATGTAAAAACTTGTTTACTTCAAC
ACAACAATATAATATCGAACTATTTGCCTCATTACTTATTCGCACTGATG
AAAATTTAGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012889TCONS_00012889Clytia hemisphaericatranscript
TCONS_00012890TCONS_00012890Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000157supercontigsc0000157:509565..514674 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.22	0	0.37	0.37	0.37	0.53	0	0.53	0.28	0.08	1.13	0.51	0.12	0.31	0	0	0.36	0	0	1.59	1.3	0.39	0.56	0.42	0.23	0	0.06	0.82	0.7