XLOC_007130 (gene) - C. hemisphaerica

Overview
NameXLOC_007130
Unique NameXLOC_007130
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000147:356411..360278+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007130 ID=XLOC_007130|Name=XLOC_007130|organism=Clytia hemisphaerica|type=gene|length=3868bp|location=Sequence derived from alignment at sc0000147:356411..360278+ (Clytia hemisphaerica)
CGTGTTAGATAGATGaatgaaggaaaaaaattataGATGTTAAAAACAAC
TGTCAAAGGAGCAGCACAGAAATGGAAAAAGTTCACTCTCATCTTGTCTT
TTGATCAGTCGACAAGTCGACTTCGAAATTGGGTGTCGCAGTACTTTTAG
CCTTTGTTGGAAAGGTAAAAGTAAGTAGACCCGATTCATCACAAGAAAAT
AGTGGTTATCGCAATTTTTTTGTTGGCTTATTTCATCAGCCTTATCGGGT
GTGATCATCAAAGACTTGAGAGTGAGAGAGGCTAGCAAATATTGAGCAAT
GTATTCTCAAATGTTGAATTCTAATCAACCACCACAAGGACTGACGGGTA
ATTTTGATGCAACATCAAACCCCATGATGCAACAGCAGTCAATGGCAGCA
ACTGATGCCAATAGTaagttttaaaatcattttatgcattttttttcaaa
gaacttgatttttggctttttcattttcatattctttAGAAATGAGATCT
TTTTAGTTTAAATCGTTCGATGATTTCTGTCATCGATGGTTTTAGAATTC
CATAACTTTGATAGTTTAAGGGTTTACGTTTTTTAACACCCTGAGaccta
tttttaaattttgagccaagattttaaaactttggTCCAATGAATTACGA
TTATTTAGACGCCGTGTTTTCTTTGTcgattttttataatttcaaaattt
tgtgacCTTGACAGAAACTCGATTGCTATATGGTTTTCGTACCCCTGTGG
GAGATTTCTATAGGGAGTCTTATGCCTCGCACATACTGatattttgccta
agtaacccccTCCGGATTTTCACCGTAAATTATGGTAACATTGTATCTTT
TGGCAGCAAAGTTACCAGAGCAGTCACAATGAATTATTTTGATCTTTCCT
TTGAATCTTTCTTAAATAGGTCTTTTAACTTTAGAGATTGAAAAGTTTGT
TGTAGGGCGTGGTATATTACACTTCGGCCATATCAATAAGGATCAATAAG
CCTAAATAGATGAGCAATTCAATTTTAAACACTTAGATGCCTTTTTTCAT
AAGGGCAGCCAATTTGGCAAAAGGTTTGAAAGATTTGCAAAAAAGTCTAA
CAAAAAAAACAGTGTTGTTTAAGATAATTAAAAACTTGAATACTGTATAT
ATGGTCTAAAACTTTTTAAGGGCAAAATTTCATCAATCGTTTATTTAGGT
CAAGCTGACTGTTCCTTTTGAGATTAAAAACCCAGAACATGACAACAGTC
AGCACAAAATAACAACCCAACTCCCGAGTAACCTTAGAAACGAATAAACA
ACTCTCAGAATAGGGCACTTCATTTAACACAGTCCTAAGTTTAGAACATT
GTTTTTGTAAATCTGACAGAGAACCATGTTCGTTGAATTTAGAACATCGG
ATAAAACTATCATGAAGAACAGAGGGAGTTTATACAAACATACTCAGTAT
GAAAAAACTCCCtaaatctttttgtttaaagTTATTAGAAGAACTTTTTG
ATACATTGAGAGTTCTAATGGGAAAAAGTTAACACAGAATCAAGAAAAcc
gttttcattaaaaattgaataaatttgaATTCAGCATTTCTCAATGCGGC
TTtatgaatattttaagaaaatatgtaATGTAATCTATATTTTTCAATAA
GTGTCAatgttaagttttttttcatGTTGGACAAGAGAAAAATGATCAAT
CAGTccctgaaaattttgaaaacctcaTTCAAGAATCTCCATCGTGgagt
attttgaaaaagtttattcATCTTACCCAGTAGGGGGCTTGAAGTCAgat
gtataaaaataaaataagaaaaagattctttcgtttataaattataaatt
accTACCAGCCTTCAACATATTAGTTATAGCTTTAACCCCCTTTTTCTTA
ACCTTGAAAATTAATTATCAATattctctctattgtttcaaaatatattt
ttcaaatgacACAATAGAAGTTTTGTGAAGACAACCCCTCTCAATACCTT
Cttgtataatttcaaaaatttttgaaatgaaaaatatcaaaatattaaaa
ataaacgaaaatgatagAAGAAATCTCGCTTCTTATATCTTATAACAGAA
AGATATATCGTTTTAAGAAAGTACactcaaagaaaatgaaaatcagaaat
aattcaatgaaagaaaCACTGTTGGgtagaaaaattggaaatatattCTC
AAGGTATTCAACAAGCAATGATTTTTGGAAATGGGGTTCAACGATTAGCG
AGGAGTTAATATTTCTGTTGCACTCGTATCGTTTCAGTTTCACTTTCTCA
AACAACTCTGTCTCGATCGAAAGTTATACCCCTGTCTCTAAGATATAGGA
TACAGCAGCCCAAACAACATTGCTTTTTCTTGAGCTCTTAAGGCCGgtgt
ccactttcgcgcgaagcgCGCGAAACTTTTCACGGTATTTGAAACgtcat
tggttgattgaaaaaagaagcaattcaattggtcaaaattgacgtaacgt
ttaaaaaaagttgaacttcctttttgttcgcgcgaaacttttttatgacg
taatcttttcttcagacaaaaacggttaagaaaaagcattacaccttttt
tcataagaacaaacttttaccaaaatattaagaacaagttaagaatattt
aaatggCTTTATTTATggactttaaaacacccaatttcttaggaaactgg
taaaattgagaaaatttcaagaatatttttagtgtttagaacattcgaag
gctttcaaatttttgaatttatagCTTTGAACGTATAGCtttaaaaaatg
tcattttcattttcgttttagATTTGTTCAGCACCATACCGAATGATATC
TACATGACTGATCATCTATACTCCCTAAACTCAAATTGGCCATTACGCCC
TCCTGAACACAACCACCATCAACACCATCAACACCAAACACATCAAGTCA
TGACCcatcatcaccatcatcatcaccatcatcCACATCTCAATTCACTG
GATACAGttcaacagcaacaacaacacgTGGTCGACGATCCAAACACATT
ACAAGAATCAGGCAATTTAGAAACACTTCTTGCGGCAGCACaacttttga
aacttcaagAAAGTGGCAGTAAAAATAAAGTCCCTGATAATATAACAAGC
TTGGCAAGTAATGAAGTAACAAACACTGATTTTGATAAATGGACGCAACA
ACAACTTCTTAATCTACCAAGTCCAACGGAATCAGAACATTCATTAAATT
CTTTAGAAGATCCATCAAACTCGTTATACCCACCCAAATACCAATGCCAA
CAATGTCATAAAGTCTTTAAAACCAAGTACACACTTACTATACATTTGAG
AATGCCTGACCACACTAAAAACAGGCCTTTTGTTTGTAGTGTGTGTGGCA
AAGGATTTCGCCTATCAAGTACGCTTTGCCGACACAAAATCATCCACACA
GCTGAAAAACCACATAAGTGCGAATTCTGCGATAAGGCTTTCAATAGATC
ATCAACACTTAAAACTCACATGAAAATACACAGTAATCAGAAAGACTTTA
TTTGTAAAATCTGCAATAAAGGATTCCATCAGAAAGGTAATTTGAGGAAT
CACATGTTAGTTCACACGGGTGAGAAACCACATAATTGCACCGAGTGTGG
TAAGCAGTTTAGTAAACTttccaatttgaaatttcatttaCAATCACATA
GTAATAGCAGATAATGATGGACTTTTAGATGTACCGTCGGATCCCAACTC
AGCTCTGGCAAACAACGTTGGATGAATGTTAATCAAACGTTGTATGAATA
TTTGATGGACGTTGCGATTTATATTTCACAGAAGATGGTATGTATTTCCC
ATATGATTTATTGGACAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012695TCONS_00012695Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012695-proteinTCONS_00012695-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000147supercontigsc0000147:356411..360278 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.06	0	0.61	0.7	6.2	4.98	5.47	3.82	4.54	5.23	39.34	40.94	3.7	2.26	3.6	4.26	40.03	46.91	11.32	11.52	4.29	7.18	10.08	19.19	3.93	1.95	0.09	0.13