TCONS_00012695-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012695-protein
Unique NameTCONS_00012695-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length335

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012695-protein ID=TCONS_00012695-protein|Name=TCONS_00012695-protein|organism=Clytia hemisphaerica|type=polypeptide|length=335bp
MYSQMLNSNQPPQGLTGNFDATSNPMMQQQSMAATDANNLFSTIPNDIYM
TDHLYSLNSNWPLRPPEHNHHQHHQHQTHQVMTHHHHHHHHHPHLNSLDT
VQQQQQHVVDDPNTLQESGNLETLLAAAQLLKLQESGSKNKVPDNITSLA
SNEVTNTDFDKWTQQQLLNLPSPTESEHSLNSLEDPSNSLYPPKYQCQQC
HKVFKTKYTLTIHLRMPDHTKNRPFVCSVCGKGFRLSSTLCRHKIIHTAE
KPHKCEFCDKAFNRSSTLKTHMKIHSNQKDFICKICNKGFHQKGNLRNHM
LVHTGEKPHNCTECGKQFSKLSNLKFHLQSHSNSR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007130XLOC_007130Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012695TCONS_00012695Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 225..247
e-value: 0.025
score: 23.8
coord: 309..331
e-value: 0.021
score: 24.0
coord: 281..303
e-value: 1.3E-4
score: 31.3
coord: 195..219
e-value: 0.0082
score: 25.4
coord: 253..275
e-value: 2.7E-4
score: 30.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 197..219
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 283..303
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 227..247
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 311..331
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 255..275
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 253..280
score: 14.046
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 195..224
score: 13.38
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 281..308
score: 15.583
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 309..335
score: 13.422
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 225..252
score: 15.022
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 234..290
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 195..247
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 275..327
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 195..219
e-value: 4.3E-5
score: 23.6
coord: 253..275
e-value: 2.7E-5
score: 24.3
coord: 281..303
e-value: 1.0E-4
score: 22.4
coord: 225..247
e-value: 0.0025
score: 18.1
NoneNo IPR availableGENE3D2.40.155.10coord: 204..228
e-value: 2.3E-11
score: 43.7
NoneNo IPR availableGENE3D3.30.160.60coord: 272..295
e-value: 8.8E-20
score: 70.0
NoneNo IPR availableGENE3D3.30.160.60coord: 259..271
e-value: 7.2E-12
score: 44.7
NoneNo IPR availableGENE3D3.30.160.60coord: 229..244
e-value: 3.3E-12
score: 45.7
NoneNo IPR availableGENE3D3.30.160.60coord: 139..203
e-value: 7.6E-5
score: 22.2
NoneNo IPR availableGENE3D2.20.25.10coord: 245..258
e-value: 3.0E-9
score: 36.2
NoneNo IPR availableGENE3D3.30.160.60coord: 296..335
e-value: 1.6E-18
score: 66.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23

Blast
[Close]
BLAST of TCONS_00012695-protein vs. Swiss-Prot (Human)
Match: FEZF2 (Fez family zinc finger protein 2 OS=Homo sapiens GN=FEZF2 PE=2 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 8.962e-55
Identity = 86/144 (59.72%), Postives = 104/144 (72.22%), Query Frame = 0 
Query:  192 PPKYQCQQCHKVFKTKYTLTIHLRMPDHTKNRPFVCSVCGKGFRLSSTLCRHKIIHTAEKPHKCEFCDKAFNRSSTLKTHMKIHSNQKDFICKICNKGFHQKGNLRNHMLVHTGEKPHNCTECGKQFSKLSNLKFHLQSHSNSR 335
            P  + C+ C KVF   Y LT H  MP HT  RPFVC VCGKGFR +STLCRHKIIHT EKPHKC  C KAFNRSSTL TH++IH+  K F+C+ C KGFHQKGN +NH L H+GEK + CT C K F ++ NL FH+ +H++ +
Sbjct:  274 PKNFTCEVCGKVFNAHYNLTRH--MPVHTGARPFVCKVCGKGFRQASTLCRHKIIHTQEKPHKCNQCGKAFNRSSTLNTHIRIHAGYKPFVCEFCGKGFHQKGNYKNHKLTHSGEKQYKCTICNKAFHQVYNLTFHMHTHNDKK 415
The following BLAST results are available for this feature:
BLAST of TCONS_00012695-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FEZF28.962e-5559.72Fez family zinc finger protein 2 OS=Homo sapiens G... [more]
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