XLOC_006729 (gene) - C. hemisphaerica

Overview
NameXLOC_006729
Unique NameXLOC_006729
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000134:483258..486580-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006729 ID=XLOC_006729|Name=XLOC_006729|organism=Clytia hemisphaerica|type=gene|length=3323bp|location=Sequence derived from alignment at sc0000134:483258..486580- (Clytia hemisphaerica)
CTCTTTTAATTAACAAACGATGTGAAAGAGAAAGTCGTTTTTGATTGATG
TTTCTGACGTTTTGCATTTGCTCATCAAGTTTACAGAAATTGTTTTTATT
TGTCAAAACACTTTTGACAGACGTCTCTCTTTTGTCTGAAGACAGTTTTG
AATACGTCATGAAAGAGTGAAAGGACAAGCTAAACCTGTTTTTGACGAAC
AGTTTGTACGTCAAATTAGACGTAATTTACAAGATACTGAAAGTAGGGAT
ATGAGGCTCATTATAAAAGCACTGCATTCGGTTTGGAAAAGTCAGAGTTA
AACGGACAAACATTACTCAAACAACATTTGAATTGGAAGTACATATTTTT
GGAAAATGGGAAGCTGGATTTCATTCGATAAAGACCACGAATCAGTTGCG
AAAGTCAAGCAATATTGTGAATCAGTCGTTTTTGTGCAATTCTACGGACA
GACGAATGACCTAAAGGTATGTTTTCACTACTGTCCTTTCGTTTAACATA
AAAAAGTAGCTACCCTGTCACAACACTTTAAAACTCCGAAATATCTGCGT
CTCCTCAGGGTAATATTCTGACATCTGACCAGATCTGACAATATCATCAT
AGGCCATTTCACAGTCGAACTGAATCATGGTTAATCAGGAATTGTTGCGC
TCTAATATTGGCTAAACGGAAAAGTCTTTATAATTTTTCCAAACTTTGGA
CTAATAGTAAGTCTTCATTGGTGCGCAGTTGTTCCGATTACCCATTGCGC
CTTGCGAGTGTGAAATGGCCTAATGATGCAAGGAAAGTGTGTGATTCAGC
AAGATAAGACAATCACTCTCGTGCTTCTATTCAGGGTTCCACTGATAACA
TCACTGGAAAACCAAAATCGAAGCTTGGCCACTTGCTCAGTGAACTTGAT
AAAGAGGTTCGAAAGGCTTCGAAAATTGAGGAATTAGAAATCACGGAATC
AATGAGGAATATTTTAAGGAAAATGGCAGAGATCAGAGTTTGCATGGCGG
ATTGTGAAACTGTCGAAGATTGTCATCAAAAGCTGTTGAATGACGCCGAA
CGATTCCAAGCGATTTACCGAAAACGTGGTCGTAAGTCATTTTATTTTCT
ATGTTTTATCAAGTATACATGATCAAAGTTAGATAAGGCTCTGTTTGAAT
TTATCAATCACCACTTTCCCGTGATAAAACTTCTGCGCTTTGGTTCATAA
GTATTGATTCTCCCTGTTTAACTTAGCTCACTTTATTTACATTTACAACA
ACCTTTTTTTAGATGAATCGGAAGTTCTGGAAGAAAAANTAACTTAGCTC
ACTTTATTTACCTTTACAACAACCTTTTTTTAGATGAATCGGAAGTTCTG
GAAGAAAAACACTCGTTTTATTGGGGTACACGACAACAGCTTCTATTCGG
AAAAGTCATTTGTGATTGGCTTGCTACGCAAAATAGTGAAAAAGCACCGA
TGGACCCTATATTTGGTACTCTCCTTAACCCGACTGGAGGTAGGTTTGAT
TGTTTTTATTGTAAATTGAGAATCACATGACTTTTGAAATAGGAGTTCAA
TATGTAGTTCAATAATATTAAAGATTTTATTAAAGTCTATGTATGACGAG
AAAAGTTTTATCTTTATCGAGAATTTTTATACTAACTAACTATAATAAAA
TGTTGGCACAATATCTATGTTTCAAACTCAGAGTTTCATGGTGCTCAGGC
ACCAATTATCAGTGAAAATCTTATACTATCTAAATATACTTTAATTAATA
TAATCATGATTTCCTTTTTAGGACGAGTTGGTCCAGGCGATACCGGATTT
TTCCACGACTCCCTTTTTGACGATATGGGTCCCTTTGCTTATCATTCAGC
AGTTCACGACGGTTTCGGTTACTTAATAACAAACCACAAGACTGGACCTG
GGTACGCTTACCTCAATAAAGGTCTTTTTGGCGATTGGAGCCCGTTTGGT
GGCCAACTTTATGGTATCAAATATTGGGAGAAAATATGCCAAAAATACCA
TCCTGATAGAGCAACTTTGGAACAATTTATTTTTTTATGATTTCAAGTAG
TAAGTTGTTATTTTAATTTTTGAGTAAATTCTTATTTTGATGGTTATGTA
AACATGTAAATATATTATTTGGATATTTAGTTGTACTATTATTCAGTTGA
CCAGTTTTACGGTCCAAGTTTGTATATATAATGAAAAGTAATTTTTCAAG
TATTTTGAAATATAATTATTAAGTATCACTCGCTTTATGTTTTACCTGCG
TTTTAAATGTTTAGTGTTTAGGTGTTTTCTGATTTTACTGTTTTCTAATT
TTAACTGGCCATTACAACTAAATCATTCTAAATCCATTCAAATCTAAACA
TTTGAGGATGCAAAGAGAATGTATTTCTTTTCATTTATTCATTACCGTCG
AACTTGACATCAGAACTAAAAACAACAGATTATATTTCTATTGGAGACTT
GCATCCGTTTCTGAGTACACTGATCAGAGTATGAGGCTTTTACCCCGGGG
TAGTAGCACTTAGGTAAAAATGGGTGCTAGGTATGTGAAAACGATAAGCG
TCGGTTTCTTCTTCCAAAGTCTTTCTAAGGGTTACAAAAATCAGAGTAGT
CTCTCTAAGGATCGGTAGATTCACAGTTTTAGAAATTTTGTTTGACCGAT
CTCGAGAGAAAATTTTTCAAAAAAGTCTCTTTAGGCGAGACCAATCTAAT
TTGTTGTTCTACGGGTCCGACCGATCCTAATTTTGCTAAAATCAAAAAAA
TAATAATATTGAATTTCCACTACAACATATTTTACACACTAGTTATTTGT
AAGAATCAAATTTGAATAAAGCTGAAAATTAATTCAAGAAATTGAAAAAT
TTAGAAAATCAAGCAGTACACTAAAATTTTATCATGATCTTCATCGAAGA
TAAAAAAAGTGCATTTTTGAACCAGATAATTTTTGGAAAACATTTTCGGT
ACTTTACCAACCCTGATAAATAAAAAATTCATTCTTATTTCACCGACCGA
GCAGCGACCCATATTTTGCTAATGACCTGCCCGTAGAACAACAAATTAAA
TTGGTCTCGCCTTAGAGGGCACTTTTTCACCAAAAATTTGTTCACTCTAA
GGGTTGGTTTTTGGAGTCTCGTCTGCGAGGGGCAAATCACTCGAAAAATG
GTGTACGAGATTTTTGATTTATGATTTATTTTTGATTTATGATTTATTTT
TGATTTATTTTTGATTTATTTTTGATTTATGATTTATTCATGATTTATTT
TTGAATTATTTTTTATTTATCTCTAATTTATGAATAGGAGTAATTTTATG
GAATATTTTTTTCAAATTATAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011993TCONS_00011993Clytia hemisphaericatranscript
TCONS_00011992TCONS_00011992Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011992-proteinTCONS_00011992-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000134supercontigsc0000134:483258..486580 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.37	0.81	0.41	0.92	0.13	0.16	0.48	0.32	0.25	2.41	0.61	1.3	86.84	74.66	108.47	32.19	56.35	199.08	88.09	96.19	3.04	1.9	21.48	9.12	37.18	12.34	146.16	93.1	42.55	32.98