XLOC_006264 (gene) - C. hemisphaerica

Overview
NameXLOC_006264
Unique NameXLOC_006264
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000122:137837..142722+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006264 ID=XLOC_006264|Name=XLOC_006264|organism=Clytia hemisphaerica|type=gene|length=4886bp|location=Sequence derived from alignment at sc0000122:137837..142722+ (Clytia hemisphaerica)
aaaaaaaGGCGTAGTGCTATAGGggttatcatccttgactcccGCCTGGG AGGTCCGAGatcgatacccaccgtgtctctacgattcacttggcaagtga atttaccttcgcccgggtcaactcatgccatgtgaggggaattgggtacc attactctgatacaagagtgtgtgtagattagacagacattgtgacgtgc cgtggcactcataaggttcggcctcgcgtgagcatcgctctcccattgtc gttcgagtgtcatggtatacgccatggcttggcagcttgTGTCTGTCAAG ttgcagtgtctgtcagcgccgtgattcctactcccttgtgggtaggaccc atcccgaatgcattcggagggctcatGTCTATCTAAAacccgctctcatc cataaattttgcagggtatctcgctacgcctatgggtagtatatggtaat atgcttttgcttaggcgccagattttcattatttttgccaggtaaaaaaa gaatgaagcaatgtttttatttgaaagtaaaagattaaaaatctgttatt gatgtttgtttctcattcttaattataattttcaacttcaagtagctttt tttttatttggattttaaacatttttttcaaaatggtaaccTCGTCAAAC TCTCCTATTTTAATTCACTGGACCCAGTTATAatcgaaaattatcaaaaa gtaaagttcagccaaaagtcgCTTGACTCCGTACAAAATTTGACACGAAA AAGGAACACTTGCCGGTCTGATTTCGACCCGTATCTCTTGAATAATACAA ATGATATTATTTTGTGGTATGATAGTTTTGAGCTCTCGTTTTCTGAATTT ATCAGTTTATCACAGCAGGTGGGGGGGGTAatcatatggtccgacccaca GCATGTgctgcccttaagggtaggtttttcaagacccttgaaatgcactg taagggtgtactatTGAtagaatgcactgtaagggtgtgttttggAGGAC AATAATACACCGTATTGAACGATAGTGTGTTGCTGGATtgcaagtctgac agtaaaatgCTGTATCTTTTTAGTTTTGACTCTCACTCGtttctttttct tgaaaataaaaaatatttttgttttatagattagataaaatgtaaaaaca tatcaagaaaattaaaagaatcactGCGATGAAGAGAGTAGCAATCATAG GGGCCGGTGCTGGAGGGCTTTGTGCTGCACGACATTTGCTCTCCCTCACA TGTGATGCGGTCAAGATACAACCTGTAGTCTTTGAACAACGCACCCGTGT AGGAGGGACATGGCTTTATGAAGAAATGAACGAAGAGCAAAATGTCTTCT CgagcatttacaaaaatctcAGGTATTttgcatagatttataaagccaga agggctagatgtcgtgcttaagccatcgcaggcaaaaaataattgaatat cGGTTGTGGTTTCCTATAAGGGGCCATCTGTATAGTATGTAGTACGCAGA GGTTTAGAAAAAGCGTACGTCTATTGTTTGAAAAAGCATAACCCAAAaat tagtctagcaagctagacgactaatttatacatagtagaaataaagcaaa aagtaatgaatggaacaattttagtcgtctagaaacctttgtgcactaac tcgaaacaaaagaaaagtgttaatattgcaattataattttttcctgctc aaaataattcttaaaaaaaaaaatttgtgtggatttgtgtattgaaagtt tttcatttgagttgatttcgttttgagagtttgttgttgcttgataaatt gttttctcgctacgcaagtttNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNaggctggaacaccggattcttcc agtcgtttatacaaactaaatcccgtattattattattagtattacacgc attataaacgactccagtctacccaaaaatcaacatttcatggactttaa ataaaaataacaagaaatGTGTTCGATGTTAAAGGTATATTTCGATGTCA GTATCGCATCATGTACTGTTGATTGCTTTTCAAGAGTCTTTATCCATAGC ATAACAAAAGATCTGCCCTGAGCAACCTCCgctacttttttatttaattt agtTGACGCTGTTACTCAGAATAATACACTCTttgtcttttataagaaca atgagtttcaaaatcgccaaaagatcagaacaatttaagaacaatgctga gtctgaaattactcaatttcaaacaatttaggggttaaagtagtaaaaat ttatatcaagcctaaaatacctcaatacAATCTGTAAATAAGAGCAGGAT AAGAACAATATGAGGCTTAAAGTGCCAATAAAATGAGAATAGCAAAACCT CAGCAAAAatctactggttcttataaaagaaaagagtGTAAGCTAACCGG CGGTATTCTTGGTATAGTGGGGTCGTTCAGCATAATTTACgggaccttct ctataggatgcttatacctcaggaaaaaatcccctaaaatcccactcgAA AGCTTTCGAacggtatacatgatattgtctggaaataattctgaaattta aaaaaaaattcgcccttaggattttgcctggggaaaaaagaaatgtccaa aaaaaggaatgttccaccagtgggattttaggggattttttcctgaggta taagaatcctatagagaaggtctggagaaagtttcagctagatatTATTT TTTCCTGCAAACAGCCTGTAtctttgtaacacgaccacactaatattcat gacgtaatatttgATACGGAAATACACGAAAACACGAAAGCGTTTGTCAC tagtttattgtttaaattcaaaactggtggcaaacgcccggtatttttcg ggtgtttctgtataaaagattacgtcatgaatatcaagaatttgcTTTTA AGGAttacaattttcttttcttaagaACAAACTTGCCGAAACAAGTGAtg aatttccccgatttcccgttTCCCGATCACGAGCCATCATACGGTCGTCC TCAAGTACCTTGAAGATTACACTAAACATTATAACCTGACACCTCACATC CGTTTCCAAACGAAAGTTATGTCGGTCGATCCTTTGGATGAAAATCAGAA TTCAAAATGGTGTCGCTGGTCTGTAAGATATCAACAAGACGGTTGTCAAG AGCAACAAGAAGAGTTTGATGCTGTGATCGTTTGCAACGGGTTTGTACGG GAAAAAAAAGGCtgtgaaatttttaattttgaagggAACTACTCTAGGGT CCCGAATAAACGTCTCCCTCTGAATTGCCTGGTTTTAGCTCataattacc ttatttttggaGTTTTAAGAGGTATAATTTTGGACATCAAAATTCAAGGA TATAACTTCCATCCCCTGCCTGATTCTTACAAACAATGCCTCACTCACTC AAgtatttcataaatttctttccTCTTTCAGTCATTATCTTGTACCAAAT TACCCCGAAATTCCTGGACTCAAAGAACATTACAAAGGCAAACAGCTACA TAGTCATTACTATAGAGACCCTGAAGACCACAAAGGAACGAAAAATGCGA TCGTTTGGGGTTTCGGGCCGTCGGGTCGTGACATAATGCTCGATTTATCA CCGAGTTGCCAGAAAATTTATCTTTGTCATAAAGGAGAACGAAGCAAGTC GGAATTTCCTCCAAATTGTGAAGAATTGCTAAACCTAAGTCACGTGAACG AAAATGgtgattttgtgacgtcatctgGTGACGTGATCAAAGATGTCGAA CTTCTTGTTGCTTGTACTGACTACCATTATGATTTTCCCTTCTTCAGTAA AAAAGtcgatttgaaaaatgaaaataagaggGTGATGTTTAATTTGTATA AACACATGTTTTACATCGATCACCCCACGCTAAGCTTTGTGGGTATTCCA TTAACTATTGCACCATTTCCCGTCATGCATCAGCAGTGTGGATATATAGC GCGTGTTATTtccgggtctgtaaatttaccGACGACAGAAGAAATGTGGG AAGACACTGTGAAGGATAGGAAACAACGAGAAAGTGAAAACGAGCCAGAA AAGTATTTCCATAAATTGGCAAACAAGCAATTTGAGTATAACGATATGTT AGCCTCGCTTTCGGGGTTGCCTAGAAACCCACCGATTATCGAAAAATTAT ACCTTTATGGGAGAATGTTTCGAAGCTCTTATATAATGACTTATAAAGAT ATGGAGTTTGTGAAAATtgatgatgaagattttaaagtcTTGAAACCGAT TGAAGATTGCTGATTAGAATTTATTGACGAAACCATATCAAATTTGGTAG ATTGTCTCTGGGTAAATAATTCAAGTAGTTTGTGAGTAAGAAAATAGTCG GGATAAtaattatgtctcttgagacatgaaattatttttttatgaataaa aagtatttttaataaaatccgctgggagttaatcaccatggcaataattt caaaacgaggcaagtgatgttcgtaacgtaatttatgaaaaggtctattg attgattgattgaaaaatgaaaattctgcTGGGTTCATTATGTAGTTTTC AAGTGCATTGgagtaaaaaaaattgtgttttttcCTGCGGATATATATTC AACTGATGTGGCCACTGACTGAGAGATAATATATATTCAACttcaatcag tgacaaaatacttggcacaatagggaaattcaccggggtgttttgaaacc acaatcaatttgtaagtgctctaaagtaggttcgaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011181TCONS_00011181Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011181-proteinTCONS_00011181-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000122supercontigsc0000122:137837..142722 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.31 3.55 3.29 3.63 7.36 5.56 4.67 5.26 3.34 3.86 4.07 2.91 3.57 2.93 4.49 6.22 6.26 6.41 3.25 4.26 3.85 3.92 7.71 6.87 5.32 4.97 6.92 5.36 6.87 6.21